Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3214

Experiment: BHIS with Lithocholic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Lithocholic 0.4 mg/ml
4,105,793	+				-3.3
4,105,898	+				+0.2
4,105,952	+		BT3213	0.17	-1.2
4,106,306	+		BT3213	0.66	+0.4
4,106,306	+		BT3213	0.66	+0.4
4,106,380	+		BT3213	0.76	-1.6
4,106,556	+				-0.2
4,107,684	+		BT3215	0.11	-0.8
4,107,684	+				-1.6
4,107,712	+		BT3215	0.20	-0.9
4,107,734	+		BT3215	0.26	-0.4
4,107,907	+		BT3215	0.78	-0.0
4,107,932	+		BT3215	0.85	-0.3
4,107,932	+		BT3215	0.85	-2.6
4,107,974	+				-1.4
4,107,974	+				+1.4
4,108,563	-		BT3217	0.32	-2.7
4,108,571	+		BT3217	0.36	-1.5
4,108,571	+		BT3217	0.36	-0.1
4,108,572	-		BT3217	0.36	+2.7
4,108,583	-		BT3217	0.42	-0.9
4,108,613	+		BT3217	0.58	+0.4
4,108,614	-		BT3217	0.58	-1.8
4,108,624	-		BT3217	0.64	-1.7