Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3211

Experiment: BHIS with Lithocholic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Lithocholic 0.4 mg/ml
4,103,825	+				+0.5
4,103,827	+				-0.2
4,103,827	+				+0.6
4,103,848	+				-1.1
4,103,869	+				+0.2
4,103,935	+		BT3210	0.15	+0.4
4,103,943	+		BT3210	0.15	-3.1
4,104,004	+		BT3210	0.22	-1.8
4,104,234	+		BT3210	0.48	-0.6
4,104,285	+		BT3210	0.54	-3.5
4,104,334	+		BT3210	0.60	+1.4
4,104,936	+		BT3211	0.85	+1.1
4,104,936	+		BT3211	0.85	+1.4
4,104,950	+				-0.9
4,105,793	+				-3.3
4,105,898	+				+0.2
4,105,952	+		BT3213	0.17	-1.2