Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0811

Experiment: BHIS with Lithocholic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Lithocholic 0.4 mg/ml
1,001,976	+		BT0809	0.78	-0.4
1,002,117	+				-1.0
1,002,240	+				-1.6
1,002,514	+		BT0810	0.78	-1.2
1,002,586	+				-0.4
1,002,587	-				-1.8
1,002,604	+				-1.4
1,002,605	-				+0.8
1,002,641	+		BT0811	0.12	-1.2
1,002,642	-		BT0811	0.13	-2.8
1,002,653	+		BT0811	0.14	+0.6
1,002,749	+		BT0811	0.27	+0.2
1,002,827	+		BT0811	0.37	-1.4
1,002,868	+		BT0811	0.42	-1.8
1,002,868	+		BT0811	0.42	-0.6
1,002,869	-		BT0811	0.42	-2.3
1,002,884	+		BT0811	0.44	-1.6
1,002,886	+		BT0811	0.45	-2.0
1,002,887	-		BT0811	0.45	-2.3
1,002,892	+		BT0811	0.45	+0.2
1,002,912	+		BT0811	0.48	-1.8
1,003,025	-		BT0811	0.63	-1.6
1,003,093	+		BT0811	0.72	+0.2
1,003,235	-				-0.7
1,003,235	-				-0.4
1,003,281	-				-0.2
1,003,301	-				+0.8
1,003,407	+				+1.2
1,003,836	-				-2.0
1,003,858	-				-4.1
1,003,868	-				+0.2
1,003,903	+				-0.8
1,003,937	+				+0.2
1,004,088	-		BT0813	0.16	+1.2
1,004,183	+		BT0813	0.23	-2.7