Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4027

Experiment: BHIS with Chenodeoxycholic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Chenodeoxycholic 0.25 mg/ml
5,241,123	+				-3.6
5,241,124	-				+0.7
5,241,158	+				+0.3
5,241,167	+		BT4026	0.11	-0.6
5,241,209	+		BT4026	0.15	+1.0
5,241,210	-		BT4026	0.15	-1.1
5,241,345	+		BT4026	0.28	-3.1
5,241,345	+		BT4026	0.28	-3.5
5,241,415	-		BT4026	0.35	+0.9
5,241,436	-		BT4026	0.37	-1.6
5,241,512	-		BT4026	0.45	-1.8
5,241,655	+		BT4026	0.59	-2.7
5,241,715	+		BT4026	0.65	+0.7
5,241,716	-		BT4026	0.65	+0.0
5,241,721	-		BT4026	0.66	-0.3
5,241,737	-		BT4026	0.68	-2.5
5,241,886	-		BT4026	0.82	-1.0
5,241,931	+		BT4026	0.87	-2.0
5,241,931	+		BT4026	0.87	+0.3
5,241,978	+				+2.3
5,242,098	+				-0.6
5,242,117	+		BT4027	0.13	-2.7
5,242,118	-		BT4027	0.14	-1.4
5,242,138	-		BT4027	0.22	-3.3
5,242,139	+		BT4027	0.23	-2.4
5,242,140	-		BT4027	0.23	-1.4
5,242,423	-		BT4028	0.41	-0.6
5,242,582	-				+0.1
5,242,615	+				+1.4
5,242,739	-				-0.6
5,242,760	-				-2.4
5,242,821	-		BT4029	0.13	-0.4
5,243,118	+		BT4029	0.53	-1.8
5,243,121	+		BT4029	0.53	+1.5
5,243,157	+		BT4029	0.58	-0.7
5,243,164	-		BT4029	0.59	-1.0
5,243,272	-		BT4029	0.74	-0.3