Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1599

Experiment: carbon source Sucrose 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	carbon source Sucrose 5mM
1,843,113	+		Pf1N1B4_1598	0.81	+0.4
1,843,114	-		Pf1N1B4_1598	0.81	-1.3
1,843,224	+		Pf1N1B4_1598	0.84	-1.8
1,843,283	-		Pf1N1B4_1598	0.86	+1.7
1,843,283	-		Pf1N1B4_1598	0.86	+0.1
1,843,852	+				-1.2
1,843,852	+				-0.6
1,843,852	+				+0.0
1,843,853	-				+0.8
1,843,853	-				-1.1
1,843,853	-				-0.6
1,843,853	-				+1.9
1,843,853	-				-0.2
1,844,019	+				-1.5
1,844,019	+				+1.1
1,844,019	+				-0.6
1,844,019	+				-0.8
1,844,019	+				-1.8
1,844,019	+				+0.1
1,844,019	+				-2.1
1,844,019	+				+3.6
1,844,019	+				-0.2
1,844,019	+				+2.1
1,844,019	+				+1.5
1,844,019	+				-2.1
1,844,019	+				+0.6
1,844,019	+				-0.4
1,844,020	-				-1.1
1,844,020	-				+0.8
1,844,020	-				-1.9
1,844,020	-				+1.0
1,844,020	-				+0.2
1,844,020	-				+4.3
1,844,020	-				-1.6
1,844,020	-				+0.5
1,844,020	-				+1.3
1,844,020	-				-1.8
1,844,022	+				-0.8
1,844,022	+				-1.6
1,844,022	+				+0.2
1,844,022	+				-0.0
1,844,022	+				-1.3
1,844,022	+				-0.9
1,844,022	+				-0.6
1,844,022	+				+2.1
1,844,022	+				-2.2
1,844,022	+				+0.8
1,844,022	+				+2.7
1,844,022	+				-1.2
1,844,023	-				+2.1
1,844,023	-				+0.8
1,844,023	-				-0.6
1,844,023	-				+1.9
1,844,023	-				-1.3
1,844,023	-				+3.1
1,844,023	-				-1.0
1,844,023	-				-0.6
1,844,023	-				-1.0
1,844,023	-				+1.6
1,844,023	-				+2.0
1,844,023	-				+0.3
1,844,023	-				-1.2
1,844,023	-				-2.7
1,844,024	+				+2.7
1,844,078	-				+0.9
1,844,108	-				-0.5
1,844,108	-				-0.6
1,844,263	+				-3.1
1,844,264	-				+2.8
1,844,264	-				+2.9
1,844,264	-				-0.4
1,844,293	+				+0.2
1,844,626	+		Pf1N1B4_1599	0.22	+0.1
1,844,626	+		Pf1N1B4_1599	0.22	-0.2
1,844,626	+		Pf1N1B4_1599	0.22	+0.6
1,844,626	+		Pf1N1B4_1599	0.22	+0.8
1,844,626	+		Pf1N1B4_1599	0.22	-0.0
1,844,626	+		Pf1N1B4_1599	0.22	+0.2
1,844,627	-		Pf1N1B4_1599	0.22	-1.0
1,844,627	-		Pf1N1B4_1599	0.22	-1.3
1,844,627	-		Pf1N1B4_1599	0.22	-3.2
1,844,627	-		Pf1N1B4_1599	0.22	+0.2
1,844,627	-		Pf1N1B4_1599	0.22	+0.9
1,844,627	-		Pf1N1B4_1599	0.22	+2.9
1,844,627	-		Pf1N1B4_1599	0.22	+0.0
1,844,627	-		Pf1N1B4_1599	0.22	-1.4
1,844,627	-		Pf1N1B4_1599	0.22	+0.3
1,844,731	+		Pf1N1B4_1599	0.27	-0.2
1,844,731	+		Pf1N1B4_1599	0.27	-1.4
1,844,781	+		Pf1N1B4_1599	0.29	+0.5
1,844,781	+		Pf1N1B4_1599	0.29	-0.9
1,844,782	-		Pf1N1B4_1599	0.29	-3.1
1,844,782	-		Pf1N1B4_1599	0.29	-2.2
1,844,782	-		Pf1N1B4_1599	0.29	+0.3
1,844,782	-		Pf1N1B4_1599	0.29	+1.0
1,844,782	-		Pf1N1B4_1599	0.29	+1.4
1,844,782	-		Pf1N1B4_1599	0.29	+1.6
1,844,809	+		Pf1N1B4_1599	0.30	-3.2
1,844,810	-		Pf1N1B4_1599	0.30	+1.8
1,844,810	-		Pf1N1B4_1599	0.30	-2.2
1,844,851	+		Pf1N1B4_1599	0.32	-1.3
1,844,851	+		Pf1N1B4_1599	0.32	-1.6
1,844,851	+		Pf1N1B4_1599	0.32	-0.9
1,844,852	-		Pf1N1B4_1599	0.32	-0.1
1,844,945	+		Pf1N1B4_1599	0.35	+0.4
1,844,945	+		Pf1N1B4_1599	0.35	+1.4
1,844,945	+		Pf1N1B4_1599	0.35	+1.1
1,844,945	+		Pf1N1B4_1599	0.35	+2.1
1,844,945	+		Pf1N1B4_1599	0.35	-2.5
1,844,946	-		Pf1N1B4_1599	0.35	+1.3
1,844,946	-		Pf1N1B4_1599	0.35	+0.4
1,845,013	-		Pf1N1B4_1599	0.38	+0.3
1,845,094	+		Pf1N1B4_1599	0.42	-0.3
1,845,156	-				+1.8
1,845,156	-		Pf1N1B4_1599	0.44	+0.6
1,845,300	+		Pf1N1B4_1599	0.50	+0.7
1,845,300	+		Pf1N1B4_1599	0.50	-1.5
1,845,301	-		Pf1N1B4_1599	0.50	+3.5
1,845,301	-		Pf1N1B4_1599	0.50	-1.5
1,845,301	-		Pf1N1B4_1599	0.50	-1.9
1,845,301	-		Pf1N1B4_1599	0.50	-1.2
1,845,361	+		Pf1N1B4_1599	0.52	-1.2
1,845,361	+		Pf1N1B4_1599	0.52	-1.0
1,845,361	+		Pf1N1B4_1599	0.52	+0.8
1,845,361	+		Pf1N1B4_1599	0.52	-1.8
1,845,362	-		Pf1N1B4_1599	0.52	-1.6
1,845,362	-		Pf1N1B4_1599	0.52	+2.0
1,845,362	-		Pf1N1B4_1599	0.52	-2.7
1,845,362	-		Pf1N1B4_1599	0.52	-2.8
1,845,362	-		Pf1N1B4_1599	0.52	+0.1
1,845,362	-		Pf1N1B4_1599	0.52	+0.6
1,845,451	+		Pf1N1B4_1599	0.56	+2.6
1,845,451	+		Pf1N1B4_1599	0.56	+0.8
1,845,451	+		Pf1N1B4_1599	0.56	+0.4
1,845,451	+		Pf1N1B4_1599	0.56	-1.2
1,845,502	+				+0.5
1,845,503	-		Pf1N1B4_1599	0.58	-0.9
1,845,503	-		Pf1N1B4_1599	0.58	+0.9
1,845,658	+		Pf1N1B4_1599	0.65	-0.5
1,845,658	+		Pf1N1B4_1599	0.65	-0.3
1,845,658	+		Pf1N1B4_1599	0.65	-0.4
1,845,658	+		Pf1N1B4_1599	0.65	-0.2
1,845,658	+		Pf1N1B4_1599	0.65	+0.1
1,845,725	+		Pf1N1B4_1599	0.67	+0.9
1,845,725	+		Pf1N1B4_1599	0.67	+0.4
1,845,725	+		Pf1N1B4_1599	0.67	+1.6
1,845,726	-		Pf1N1B4_1599	0.67	-0.8
1,845,871	+		Pf1N1B4_1599	0.73	+0.5
1,845,872	-		Pf1N1B4_1599	0.73	+2.4
1,845,872	-		Pf1N1B4_1599	0.73	+0.9
1,846,277	-		Pf1N1B4_1599	0.90	-0.5
1,846,277	-		Pf1N1B4_1599	0.90	+1.2
1,846,277	-		Pf1N1B4_1599	0.90	+1.0
1,846,312	+				+1.0
1,846,312	+				-1.0
1,846,312	+				-1.0
1,846,312	+				-1.7
1,846,312	+				+1.5
1,846,312	+				+0.7
1,846,312	+				-0.8
1,846,313	-				+0.6
1,846,313	-				+0.8
1,846,313	-				-1.3
1,846,313	-				-2.4
1,846,313	-				-0.2
1,846,313	-				-0.8
1,846,313	-				-2.0
1,846,315	+				-0.2
1,846,315	+				-0.5
1,846,315	+				+0.7
1,846,315	+				-1.3
1,846,315	+				-1.0
1,846,316	-				+0.1
1,846,316	-				-1.3
1,846,316	-				+1.1
1,846,339	+				+0.2
1,846,340	-				-1.3
1,846,453	+				-1.0
1,846,453	+				+0.1
1,846,454	-				+0.7
1,846,454	-				-0.3
1,846,457	+				+0.1
1,846,457	+				+0.2
1,846,457	+				-1.5
1,846,457	+				+0.8
1,846,457	+				-0.0
1,846,458	-				-2.4
1,846,458	-				-1.6
1,846,458	-				-0.2
1,846,458	-				-1.0
1,846,530	+				+2.1
1,846,564	+				+0.6
1,846,565	-				+1.7
1,846,623	+				-0.3
1,846,623	+				-2.5
1,846,623	+				+0.2
1,846,623	+				+0.2
1,846,623	+				-2.5
1,846,623	+				+0.6
1,846,623	+				-1.0
1,846,624	-				-1.2
1,846,624	-				-0.2
1,846,634	+				-0.8
1,846,634	+				-1.8
1,846,634	+				-3.1
1,846,634	+				+1.2
1,846,634	+				-1.5
1,846,634	+				+0.2
1,846,635	-				+0.8
1,846,635	-				+0.3
1,846,635	-				+0.6
1,846,635	-				-0.8
1,846,635	-				-1.8
1,846,635	-				-0.8
1,846,685	+				+0.4
1,846,685	+				-2.2
1,846,686	-				+1.2
1,846,745	-				-0.8
1,846,745	-				+1.0
1,846,775	-				+0.9
1,846,830	+		Pf1N1B4_1600	0.11	-0.8
1,846,843	+		Pf1N1B4_1600	0.14	+1.7
1,846,843	+		Pf1N1B4_1600	0.14	+0.6
1,846,843	+		Pf1N1B4_1600	0.14	-0.6
1,846,843	+		Pf1N1B4_1600	0.14	-0.0
1,846,843	+		Pf1N1B4_1600	0.14	+1.9
1,846,843	+		Pf1N1B4_1600	0.14	+0.9
1,846,843	+		Pf1N1B4_1600	0.14	-2.1
1,846,844	-		Pf1N1B4_1600	0.14	+0.4
1,846,844	-		Pf1N1B4_1600	0.14	+0.7
1,846,995	+		Pf1N1B4_1600	0.48	+0.6
1,847,008	+		Pf1N1B4_1600	0.51	-2.8
1,847,008	+		Pf1N1B4_1600	0.51	+0.5
1,847,008	+		Pf1N1B4_1600	0.51	+0.3
1,847,010	+		Pf1N1B4_1600	0.52	-1.3
1,847,065	+		Pf1N1B4_1600	0.64	-1.6
1,847,066	-		Pf1N1B4_1600	0.65	-1.7
1,847,094	+		Pf1N1B4_1600	0.71	-0.5
1,847,094	+		Pf1N1B4_1600	0.71	-2.3
1,847,094	+		Pf1N1B4_1600	0.71	+0.4
1,847,095	-		Pf1N1B4_1600	0.71	+0.9
1,847,098	+		Pf1N1B4_1600	0.72	-2.5
1,847,098	+		Pf1N1B4_1600	0.72	-1.9
1,847,098	+		Pf1N1B4_1600	0.72	-2.7
1,847,098	+		Pf1N1B4_1600	0.72	-2.3
1,847,098	+		Pf1N1B4_1600	0.72	+1.6
1,847,098	+		Pf1N1B4_1600	0.72	+1.2
1,847,099	-		Pf1N1B4_1600	0.72	-0.4
1,847,099	-		Pf1N1B4_1600	0.72	-1.6
1,847,099	-		Pf1N1B4_1600	0.72	+2.7
1,847,103	+		Pf1N1B4_1600	0.73	-2.0
1,847,104	-		Pf1N1B4_1600	0.73	-0.2
1,847,155	+		Pf1N1B4_1600	0.85	+0.5
1,847,164	+		Pf1N1B4_1600	0.87	-0.6
1,847,271	+				+0.2
1,847,318	+				+0.7
1,847,319	-				-2.4
1,847,319	-				-1.5
1,847,319	-				+1.8
1,847,352	-				+2.2
1,847,358	+				-0.9
1,847,428	-				-1.6
1,847,431	+				-2.7
1,847,431	+				-1.6
1,847,432	-				-0.2
1,847,432	-				-0.2
1,847,432	-				+0.3
1,847,432	-				-1.4