Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16510

Experiment: Sucrose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with TAPS
3,746,475	+		PFLU_RS16505	0.39	-0.9
3,746,571	+		PFLU_RS16505	0.46	-0.9
3,746,571	+		PFLU_RS16505	0.46	+0.6
3,746,572	-		PFLU_RS16505	0.46	+0.5
3,746,724	+		PFLU_RS16505	0.58	-1.6
3,746,724	+		PFLU_RS16505	0.58	-0.5
3,746,724	+		PFLU_RS16505	0.58	+0.2
3,746,724	+		PFLU_RS16505	0.58	+0.2
3,746,724	+		PFLU_RS16505	0.58	-0.1
3,746,724	+		PFLU_RS16505	0.58	-0.5
3,746,724	+		PFLU_RS16505	0.58	+0.3
3,746,724	+		PFLU_RS16505	0.58	+1.0
3,746,725	-		PFLU_RS16505	0.58	+0.5
3,746,725	-		PFLU_RS16505	0.58	-1.1
3,746,725	-		PFLU_RS16505	0.58	-0.7
3,746,725	-		PFLU_RS16505	0.58	+0.1
3,746,725	-		PFLU_RS16505	0.58	-0.0
3,746,725	-		PFLU_RS16505	0.58	+0.4
3,746,726	+		PFLU_RS16505	0.58	+0.3
3,746,726	+		PFLU_RS16505	0.58	-2.5
3,746,726	+		PFLU_RS16505	0.58	-0.6
3,746,727	-		PFLU_RS16505	0.58	+0.8
3,746,727	-		PFLU_RS16505	0.58	+0.4
3,746,727	-		PFLU_RS16505	0.58	+0.8
3,746,727	-		PFLU_RS16505	0.58	-1.8
3,746,727	-		PFLU_RS16505	0.58	-0.1
3,746,727	-		PFLU_RS16505	0.58	-0.4
3,746,727	-		PFLU_RS16505	0.58	-0.3
3,746,727	-		PFLU_RS16505	0.58	+0.5
3,746,739	+		PFLU_RS16505	0.59	-1.2
3,746,739	+		PFLU_RS16505	0.59	-0.6
3,746,739	+		PFLU_RS16505	0.59	-0.0
3,746,739	+		PFLU_RS16505	0.59	-0.1
3,746,739	+		PFLU_RS16505	0.59	+0.4
3,746,739	+		PFLU_RS16505	0.59	+1.2
3,746,739	+		PFLU_RS16505	0.59	+0.6
3,746,739	+		PFLU_RS16505	0.59	+1.3
3,746,740	-		PFLU_RS16505	0.59	-0.2
3,746,751	+		PFLU_RS16505	0.60	+0.8
3,746,751	+		PFLU_RS16505	0.60	+0.8
3,746,751	+		PFLU_RS16505	0.60	+0.0
3,746,751	+		PFLU_RS16505	0.60	+0.2
3,746,751	+		PFLU_RS16505	0.60	-0.1
3,746,751	+		PFLU_RS16505	0.60	+0.8
3,746,751	+		PFLU_RS16505	0.60	-0.5
3,746,751	+		PFLU_RS16505	0.60	+2.0
3,746,751	+		PFLU_RS16505	0.60	+0.4
3,746,752	-		PFLU_RS16505	0.60	-0.4
3,746,752	-		PFLU_RS16505	0.60	+0.1
3,746,752	-		PFLU_RS16505	0.60	-0.8
3,746,752	-		PFLU_RS16505	0.60	+1.0
3,746,850	+		PFLU_RS16505	0.67	-0.7
3,746,850	+		PFLU_RS16505	0.67	+0.4
3,746,850	+		PFLU_RS16505	0.67	+0.4
3,746,850	+		PFLU_RS16505	0.67	-0.7
3,746,850	+		PFLU_RS16505	0.67	-0.3
3,746,850	+		PFLU_RS16505	0.67	-0.1
3,746,851	-		PFLU_RS16505	0.67	+2.4
3,746,851	-		PFLU_RS16505	0.67	+0.2
3,746,851	-		PFLU_RS16505	0.67	-0.4
3,746,916	+		PFLU_RS16505	0.72	-0.6
3,746,916	+		PFLU_RS16505	0.72	+0.1
3,746,916	+		PFLU_RS16505	0.72	+0.1
3,746,917	-		PFLU_RS16505	0.72	-0.7
3,746,917	-		PFLU_RS16505	0.72	+0.2
3,747,075	+		PFLU_RS16505	0.84	+0.2
3,747,075	+		PFLU_RS16505	0.84	-0.9
3,747,075	+		PFLU_RS16505	0.84	-0.1
3,747,075	+		PFLU_RS16505	0.84	-0.8
3,747,075	+		PFLU_RS16505	0.84	-0.8
3,747,075	+		PFLU_RS16505	0.84	+0.6
3,747,075	+		PFLU_RS16505	0.84	-0.6
3,747,076	-		PFLU_RS16505	0.84	-0.6
3,747,076	-		PFLU_RS16505	0.84	+0.1
3,747,076	-		PFLU_RS16505	0.84	+1.1
3,747,076	-		PFLU_RS16505	0.84	+0.2
3,747,076	-		PFLU_RS16505	0.84	-0.9
3,747,076	-		PFLU_RS16505	0.84	+0.2
3,747,076	-		PFLU_RS16505	0.84	+0.7
3,747,076	-		PFLU_RS16505	0.84	+1.1
3,747,076	-		PFLU_RS16505	0.84	-0.2
3,747,076	-		PFLU_RS16505	0.84	-0.8
3,747,076	-		PFLU_RS16505	0.84	-0.1
3,747,076	-		PFLU_RS16505	0.84	-1.1
3,747,076	-		PFLU_RS16505	0.84	-0.3
3,747,076	-		PFLU_RS16505	0.84	+1.0
3,747,076	-		PFLU_RS16505	0.84	+0.6
3,747,076	-		PFLU_RS16505	0.84	-0.1
3,747,076	-		PFLU_RS16505	0.84	-0.3
3,747,088	-		PFLU_RS16505	0.85	+0.4
3,747,088	-		PFLU_RS16505	0.85	-0.1
3,747,088	-		PFLU_RS16505	0.85	-0.0
3,747,088	-		PFLU_RS16505	0.85	-0.7
3,747,169	-				-1.6
3,747,288	+				+0.3
3,747,296	+				-0.1
3,747,296	+				+0.3
3,747,296	+				+1.3
3,747,296	+				+1.4
3,747,296	+				+0.3
3,747,296	+				-1.4
3,747,296	+				-1.3
3,747,296	+				-0.6
3,747,296	+				+2.3
3,747,296	+				+0.4
3,747,296	+				-2.0
3,747,296	+				+0.5
3,747,296	+				-1.3
3,747,296	+				-0.9
3,747,296	+				+0.6
3,747,296	+				-0.1
3,747,296	+				+0.5
3,747,297	-				+0.1
3,747,297	-				+0.9
3,747,297	-				-0.4
3,747,297	-				+0.2
3,747,297	-				-0.6
3,747,297	-				-0.1
3,747,297	-				-0.9
3,747,297	-				-1.9
3,747,300	+				+0.2
3,747,300	+				+1.3
3,747,300	+				+0.3
3,747,300	+				-1.8
3,747,300	+				-0.2
3,747,300	+				+0.3
3,747,300	+				+0.1
3,747,301	-				+0.4
3,747,301	-				-2.6
3,747,301	-				-0.8
3,747,301	-				+0.1
3,747,301	-				-1.9
3,747,301	-				+1.0
3,747,301	-				-0.3
3,747,382	+				-0.7
3,747,382	+				-0.6
3,747,382	+				+1.1
3,747,382	+				+0.4
3,747,382	+				+2.1
3,747,383	-				-0.5
3,747,383	-				-0.4
3,747,383	-				+0.5
3,747,383	-				+0.8
3,747,661	+		PFLU_RS16510	0.53	-0.4
3,747,741	+		PFLU_RS16510	0.71	-0.4
3,747,811	+		PFLU_RS16510	0.86	-1.2
3,747,811	+		PFLU_RS16510	0.86	-0.8
3,747,812	-		PFLU_RS16510	0.86	-0.4
3,747,812	-		PFLU_RS16510	0.86	-0.5
3,747,869	+				+0.6
3,747,915	+				+0.1
3,747,915	+				-1.9
3,747,915	+				-0.9
3,747,915	+				+0.4
3,747,915	+				+0.5
3,747,915	+				+0.7
3,747,915	+				+0.1
3,747,916	-				-0.5
3,747,916	-				+0.5
3,747,916	-				-0.2
3,747,916	-				-0.8
3,747,916	-				+0.9
3,747,916	-				-2.6
3,747,950	+				+0.9
3,747,950	+				+0.1
3,747,999	+				+0.3
3,747,999	+				-1.1
3,748,000	-				+0.8
3,748,000	-				-0.2
3,748,000	-				+0.0
3,748,004	+				-0.5
3,748,004	+				+0.5
3,748,004	+				-0.2
3,748,004	+				-0.7
3,748,004	+				+0.3
3,748,004	+				+0.8
3,748,004	+				-0.3
3,748,004	+				-0.3
3,748,004	+				+1.3
3,748,004	+				+0.3
3,748,005	-				+0.4
3,748,005	-				-0.1
3,748,005	-				+1.1
3,748,120	+		PFLU_RS16515	0.22	-0.5
3,748,153	+		PFLU_RS16515	0.31	-0.8
3,748,153	+		PFLU_RS16515	0.31	-0.8
3,748,153	+		PFLU_RS16515	0.31	-0.9
3,748,153	+		PFLU_RS16515	0.31	-0.3
3,748,154	-		PFLU_RS16515	0.31	+0.5
3,748,165	+		PFLU_RS16515	0.34	-0.4
3,748,166	-		PFLU_RS16515	0.35	+0.3
3,748,249	+		PFLU_RS16515	0.58	+1.7
3,748,270	-		PFLU_RS16515	0.64	+1.1
3,748,270	-		PFLU_RS16515	0.64	-1.1
3,748,320	+		PFLU_RS16515	0.78	+0.8
3,748,320	+		PFLU_RS16515	0.78	-1.1
3,748,367	-				-0.2
3,748,397	-				-0.5
3,748,483	+		PFLU_RS16520	0.13	-0.4
3,748,483	+		PFLU_RS16520	0.13	-0.2
3,748,483	+		PFLU_RS16520	0.13	+0.8
3,748,483	+		PFLU_RS16520	0.13	+0.4
3,748,484	-		PFLU_RS16520	0.13	-0.6
3,748,484	-		PFLU_RS16520	0.13	-1.4
3,748,484	-		PFLU_RS16520	0.13	+0.6
3,748,484	-		PFLU_RS16520	0.13	+1.4
3,748,484	-		PFLU_RS16520	0.13	-0.5
3,748,515	+		PFLU_RS16520	0.24	-0.2
3,748,516	-		PFLU_RS16520	0.24	+0.0
3,748,540	+		PFLU_RS16520	0.33	+0.6
3,748,540	+		PFLU_RS16520	0.33	+1.1
3,748,665	+		PFLU_RS16520	0.76	+0.6
3,748,665	+		PFLU_RS16520	0.76	+1.2
3,748,666	-		PFLU_RS16520	0.76	-0.2
3,748,670	-		PFLU_RS16520	0.78	-0.2
3,748,711	+				-0.8
3,748,711	+				-0.8
3,748,712	-				-1.5
3,748,712	-				+0.6
3,748,712	-				+0.3
3,748,712	-				+0.4
3,748,784	+				-0.1
3,748,784	+				-0.1
3,748,784	+				-0.1
3,748,785	-				-1.4
3,748,785	-				-0.2
3,748,785	-				-0.2
3,748,821	+				+1.6
3,748,821	+				+0.0
3,748,821	+				+0.3
3,748,821	+				-1.0
3,748,822	-				-0.2
3,748,822	-				+1.1
3,748,822	-				+0.3
3,748,822	-				-1.6
3,748,822	-				+0.3
3,748,834	-				+0.9
3,748,834	-				-0.6
3,748,834	-				-0.2
3,748,857	-		PFLU_RS16525	0.11	+0.6