Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00535

Experiment: Sucrose (C) and L-Glutamine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with TAPS
109,087	+				-0.4
109,443	+		PFLU_RS00530	0.89	-0.7
109,443	+		PFLU_RS00530	0.89	+0.4
109,443	+		PFLU_RS00530	0.89	-0.1
109,492	+				+0.4
109,492	+				-0.3
109,492	+				+0.5
109,492	+				-0.3
109,492	+				-0.7
109,492	+				-0.3
109,492	+				+0.3
109,492	+				-0.9
109,492	+				-2.1
109,492	+				-0.2
109,492	+				-0.1
109,492	+				-1.7
109,493	-				-0.9
109,493	-				-1.0
109,493	-				+1.0
109,493	-				-0.4
109,493	-				+0.0
109,493	-				+0.1
109,493	-				+0.2
109,493	-				+1.1
109,493	-				-0.4
109,493	-				-0.8
109,504	+				-0.6
109,543	+				-0.3
109,543	+				-0.2
109,543	+				+0.5
109,543	+				-0.4
109,543	+				+0.7
109,543	+				-0.7
109,543	+				-0.3
109,543	+				+1.2
109,543	+				-0.3
109,543	+				+0.2
109,544	-				+0.2
109,544	-				+0.3
109,544	-				-0.8
109,544	-				-0.0
109,544	-				-0.6
109,544	-				+0.5
109,573	+				+0.3
109,574	-				-1.0
109,576	+				+0.4
109,576	+				-0.8
109,577	-				+0.6
109,577	-				-0.9
109,577	-				-0.2
109,616	+				+0.7
109,616	+				+0.2
109,616	+				+0.6
109,616	+				+0.3
109,617	-				+0.2
109,617	-				-0.8
109,722	-		PFLU_RS30320	0.58	+0.3
109,722	-		PFLU_RS30320	0.58	+1.6
109,722	-		PFLU_RS30320	0.58	-0.6
109,722	-		PFLU_RS30320	0.58	-0.5
109,722	-		PFLU_RS30320	0.58	+0.3
109,740	+		PFLU_RS30320	0.67	-0.9
109,740	+		PFLU_RS30320	0.67	+1.4
109,740	+		PFLU_RS30320	0.67	-0.4
109,740	+		PFLU_RS30320	0.67	+1.0
109,740	+		PFLU_RS30320	0.67	-0.6
109,741	-		PFLU_RS30320	0.68	-0.2
109,741	-		PFLU_RS30320	0.68	+1.9
109,741	-		PFLU_RS30320	0.68	-0.8
109,741	-		PFLU_RS30320	0.68	+0.7
109,776	+		PFLU_RS30320	0.87	-0.5
109,776	+		PFLU_RS30320	0.87	+0.6
109,776	+		PFLU_RS30320	0.87	+0.3
109,776	+		PFLU_RS30320	0.87	-0.1
109,776	+		PFLU_RS30320	0.87	-0.1
109,776	+		PFLU_RS30320	0.87	-0.1
109,776	+		PFLU_RS30320	0.87	-0.5
109,777	-		PFLU_RS30320	0.87	-0.4
109,777	-		PFLU_RS30320	0.87	-0.2
109,778	+		PFLU_RS30320	0.88	-1.4
109,778	+		PFLU_RS30320	0.88	-1.2
109,778	+		PFLU_RS30320	0.88	+1.1
109,778	+		PFLU_RS30320	0.88	-0.0
109,778	+		PFLU_RS30320	0.88	-0.6
109,778	+		PFLU_RS30320	0.88	+0.0
109,778	+		PFLU_RS30320	0.88	-0.6
109,778	+		PFLU_RS30320	0.88	-1.8
109,779	-		PFLU_RS30320	0.88	+1.2
109,779	-		PFLU_RS30320	0.88	-0.6
109,779	-		PFLU_RS30320	0.88	-0.4
109,779	-		PFLU_RS30320	0.88	+0.1
109,779	-		PFLU_RS30320	0.88	-0.1
109,779	-		PFLU_RS30320	0.88	-1.7
109,779	-		PFLU_RS30320	0.88	+0.2
109,779	-		PFLU_RS30320	0.88	-0.4
109,779	-		PFLU_RS30320	0.88	+0.5
109,794	+				-0.6
109,795	-				-0.2
109,795	-				-0.1
109,807	+				-1.4
109,807	+				+0.5
109,864	+				+0.3
109,865	-				-0.4
109,865	-				+0.1
109,882	+				-1.2
109,883	-				-0.2
109,904	-				-1.8
109,904	-				+1.1
109,907	-				-0.8
109,912	+				+0.6
109,941	+				-0.5
109,942	-				+0.9
110,061	-				+0.8
110,095	+		PFLU_RS00535	0.14	+1.1
110,095	+		PFLU_RS00535	0.14	+0.3
110,095	+		PFLU_RS00535	0.14	-0.7
110,233	-		PFLU_RS00535	0.78	+0.5
110,233	-		PFLU_RS00535	0.78	-0.3
110,233	-		PFLU_RS00535	0.78	-1.0
110,270	+				+0.7
110,270	+				-0.7
110,270	+				+0.5
110,270	+				-0.3
110,270	+				-0.3
110,271	-				-0.1
110,271	-				+0.1
110,271	-				-1.1
110,271	-				-1.0
110,271	-				+0.0
110,271	-				+0.6
110,271	-				+0.1
110,308	+				+0.3
110,308	+				-0.1
110,308	+				+0.2
110,308	+				+0.6
110,312	+				-0.0
110,312	+				-0.3
110,313	-				+0.8
110,313	-				+0.8
110,313	-				+0.1
110,313	-				-0.0
110,313	-				+0.4
110,321	-				-0.5
110,321	-				+0.1
110,360	-				+0.2
110,360	-				+0.7
110,360	-				+0.9
110,363	+				+0.5
110,363	+				+1.1
110,364	-				-0.2
110,393	+				+0.3
110,403	+				+0.8
110,437	-				+0.7
110,450	+				-0.4
110,450	+				+0.3
110,451	-				+0.1
110,451	-				+0.4
110,451	-				+0.3
110,451	-				+0.5
110,454	+				+0.5
110,454	+				+1.4
110,455	-				-1.2
110,491	+				-0.7
110,492	-				-0.2
110,570	+				-1.0
110,570	+				+1.3
110,570	+				-0.1
110,570	+				+0.5
110,570	+				-0.1
110,570	+				+0.6
110,570	+				-0.9
110,571	-				+0.1
110,571	-				+0.5
110,571	-				-0.1
110,571	-				+0.1
110,571	-				+0.4
110,571	-				-0.7
110,592	+				+1.8
110,592	+				+0.2
110,592	+				-0.0
110,592	+				-0.3
110,593	-				+0.4
110,593	-				-0.4
110,633	+				+1.1
110,633	+				-0.9
110,634	-				+0.1
110,634	-				+0.6
110,672	+				+0.8
110,672	+				-0.4
110,673	-				+0.1
110,704	+				+0.6
110,704	+				-0.4
110,704	+				-0.1
110,704	+				+0.1
110,704	+				-0.3
110,704	+				+0.4
110,705	-				-1.0
110,705	-				-0.1
110,705	-				-1.3
110,705	-				-0.1
110,705	-				+0.2
110,705	-				+0.1
110,725	+				-1.0
110,736	+				+0.9
110,736	+				-0.4
110,736	+				+0.8
110,736	+				+0.3
110,736	+				-0.7
110,736	+				-1.7
110,736	+				+1.7
110,736	+				+1.9
110,736	+				+0.5
110,736	+				+0.4
110,736	+				-0.8
110,737	-				-0.7
110,737	-				-0.6
110,737	-				-2.1
110,737	-				+0.8
110,737	-				-1.1
110,737	-				-0.0
110,737	-				-0.1
110,865	+		PFLU_RS00540	0.18	-0.3
110,865	+		PFLU_RS00540	0.18	+1.6
110,865	+		PFLU_RS00540	0.18	-0.7
110,865	+		PFLU_RS00540	0.18	-2.4
110,865	+		PFLU_RS00540	0.18	-1.6
110,865	+		PFLU_RS00540	0.18	+0.2
110,865	+		PFLU_RS00540	0.18	-1.1
110,865	+		PFLU_RS00540	0.18	-0.7
110,866	-		PFLU_RS00540	0.18	-0.8
110,866	-		PFLU_RS00540	0.18	+0.7
111,004	+		PFLU_RS00540	0.27	+0.0
111,004	+		PFLU_RS00540	0.27	+0.8
111,004	+		PFLU_RS00540	0.27	-0.3
111,004	+		PFLU_RS00540	0.27	+0.7
111,005	-		PFLU_RS00540	0.27	+0.3
111,005	-		PFLU_RS00540	0.27	-1.6
111,005	-		PFLU_RS00540	0.27	+1.2
111,005	-		PFLU_RS00540	0.27	+1.4
111,005	-		PFLU_RS00540	0.27	-0.0
111,005	-		PFLU_RS00540	0.27	-0.9
111,093	+		PFLU_RS00540	0.33	+0.3
111,093	+		PFLU_RS00540	0.33	+1.0
111,094	-		PFLU_RS00540	0.33	-1.1
111,094	-		PFLU_RS00540	0.33	+0.4
111,094	-		PFLU_RS00540	0.33	+0.7
111,094	-		PFLU_RS00540	0.33	-1.6
111,109	+		PFLU_RS00540	0.34	-0.2
111,109	+		PFLU_RS00540	0.34	-3.7
111,109	+		PFLU_RS00540	0.34	+1.5
111,109	+		PFLU_RS00540	0.34	+0.5
111,109	+		PFLU_RS00540	0.34	+0.9
111,110	-		PFLU_RS00540	0.34	-0.8
111,110	-		PFLU_RS00540	0.34	+0.1
111,110	-		PFLU_RS00540	0.34	+0.4
111,110	-		PFLU_RS00540	0.34	+0.1
111,235	+		PFLU_RS00540	0.43	-0.1
111,235	+		PFLU_RS00540	0.43	+0.7
111,235	+		PFLU_RS00540	0.43	+0.5
111,235	+		PFLU_RS00540	0.43	+0.2
111,235	+		PFLU_RS00540	0.43	+0.4
111,235	+		PFLU_RS00540	0.43	+0.5
111,235	+		PFLU_RS00540	0.43	-0.8
111,236	-		PFLU_RS00540	0.43	-0.6
111,236	-		PFLU_RS00540	0.43	+0.8
111,236	-		PFLU_RS00540	0.43	-1.1
111,236	-		PFLU_RS00540	0.43	+0.9
111,236	-		PFLU_RS00540	0.43	+1.1
111,236	-		PFLU_RS00540	0.43	-0.3
111,236	-		PFLU_RS00540	0.43	-1.5
111,236	-		PFLU_RS00540	0.43	+0.6
111,236	-		PFLU_RS00540	0.43	-0.6
111,236	-		PFLU_RS00540	0.43	+1.4
111,236	-		PFLU_RS00540	0.43	+1.3
111,236	-		PFLU_RS00540	0.43	-2.4
111,236	-		PFLU_RS00540	0.43	-1.9