Experiment: MoLS4 with S-adenosyl Homocysteine 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0133 and DVU0134 are separated by 360 nucleotides DVU0134 and DVU0135 are separated by 80 nucleotides
DVU0133: DVU0133 - hypothetical protein (TIGR), at 169,361 to 170,083
DVU0133
DVU0134: DVU0134 - glycosyl transferase, group 2 family protein (TIGR), at 170,444 to 171,481
DVU0134
DVU0135: DVU0135 - conserved hypothetical protein (TIGR), at 171,562 to 172,473
DVU0135
Position (kb) 170
171
172 Strain fitness (log2 ratio) -2
-1
0
1
2 at 169.478 kb on + strand, within DVU0133 at 169.483 kb on + strand, within DVU0133 at 169.547 kb on - strand, within DVU0133 at 169.684 kb on + strand, within DVU0133 at 169.684 kb on + strand, within DVU0133 at 169.684 kb on + strand, within DVU0133 at 169.711 kb on - strand, within DVU0133 at 169.714 kb on - strand, within DVU0133 at 169.817 kb on + strand, within DVU0133 at 169.831 kb on + strand, within DVU0133 at 169.831 kb on + strand, within DVU0133 at 169.831 kb on + strand, within DVU0133 at 169.832 kb on + strand, within DVU0133 at 169.839 kb on - strand, within DVU0133 at 169.851 kb on - strand, within DVU0133 at 169.857 kb on - strand, within DVU0133 at 169.998 kb on - strand, within DVU0133 at 170.019 kb on + strand at 170.059 kb on + strand at 170.067 kb on - strand at 170.067 kb on - strand at 170.078 kb on + strand at 170.078 kb on + strand at 170.078 kb on + strand at 170.086 kb on - strand at 170.086 kb on - strand at 170.086 kb on - strand at 170.167 kb on + strand at 170.211 kb on + strand at 170.234 kb on - strand at 170.330 kb on - strand at 170.354 kb on + strand at 170.362 kb on - strand at 170.363 kb on - strand at 170.382 kb on + strand at 170.382 kb on + strand at 170.472 kb on + strand at 170.479 kb on + strand at 170.487 kb on - strand at 170.515 kb on - strand at 170.613 kb on + strand, within DVU0134 at 170.685 kb on + strand, within DVU0134 at 170.698 kb on - strand, within DVU0134 at 170.766 kb on + strand, within DVU0134 at 170.773 kb on + strand, within DVU0134 at 170.843 kb on - strand, within DVU0134 at 170.881 kb on + strand, within DVU0134 at 170.881 kb on + strand, within DVU0134 at 170.894 kb on - strand, within DVU0134 at 170.961 kb on + strand, within DVU0134 at 170.973 kb on + strand, within DVU0134 at 170.987 kb on - strand, within DVU0134 at 170.989 kb on - strand, within DVU0134 at 171.022 kb on + strand, within DVU0134 at 171.030 kb on - strand, within DVU0134 at 171.074 kb on + strand, within DVU0134 at 171.118 kb on - strand, within DVU0134 at 171.126 kb on - strand, within DVU0134 at 171.200 kb on + strand, within DVU0134 at 171.276 kb on + strand, within DVU0134 at 171.357 kb on + strand, within DVU0134 at 171.373 kb on - strand, within DVU0134 at 171.385 kb on + strand at 171.410 kb on + strand at 171.428 kb on - strand at 171.555 kb on + strand at 171.558 kb on - strand at 171.685 kb on + strand, within DVU0135 at 171.685 kb on + strand, within DVU0135 at 171.718 kb on - strand, within DVU0135 at 171.751 kb on - strand, within DVU0135 at 171.887 kb on + strand, within DVU0135 at 171.887 kb on + strand, within DVU0135 at 171.945 kb on + strand, within DVU0135 at 171.964 kb on - strand, within DVU0135 at 171.968 kb on + strand, within DVU0135 at 171.992 kb on - strand, within DVU0135 at 172.098 kb on - strand, within DVU0135 at 172.098 kb on - strand, within DVU0135 at 172.099 kb on + strand, within DVU0135 at 172.099 kb on + strand, within DVU0135 at 172.183 kb on + strand, within DVU0135 at 172.269 kb on - strand, within DVU0135 at 172.408 kb on + strand at 172.413 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with S-adenosyl Homocysteine 100uM remove 169,478 + DVU0133 0.16 -0.3 169,483 + DVU0133 0.17 -0.3 169,547 - DVU0133 0.26 -0.4 169,684 + DVU0133 0.45 -0.2 169,684 + DVU0133 0.45 -0.9 169,684 + DVU0133 0.45 -0.3 169,711 - DVU0133 0.48 -1.3 169,714 - DVU0133 0.49 -0.9 169,817 + DVU0133 0.63 -1.1 169,831 + DVU0133 0.65 -0.4 169,831 + DVU0133 0.65 -0.5 169,831 + DVU0133 0.65 -0.9 169,832 + DVU0133 0.65 -0.3 169,839 - DVU0133 0.66 -2.2 169,851 - DVU0133 0.68 -0.9 169,857 - DVU0133 0.69 +0.2 169,998 - DVU0133 0.88 -0.2 170,019 + -0.9 170,059 + +0.7 170,067 - -0.9 170,067 - +0.3 170,078 + -0.3 170,078 + +0.2 170,078 + +0.9 170,086 - -0.2 170,086 - -0.3 170,086 - -0.6 170,167 + -0.5 170,211 + -1.0 170,234 - -0.3 170,330 - +0.3 170,354 + -0.1 170,362 - -0.3 170,363 - +0.1 170,382 + -0.1 170,382 + +0.1 170,472 + -0.1 170,479 + +0.4 170,487 - -1.2 170,515 - -0.1 170,613 + DVU0134 0.16 -1.5 170,685 + DVU0134 0.23 -0.5 170,698 - DVU0134 0.24 -0.2 170,766 + DVU0134 0.31 +2.6 170,773 + DVU0134 0.32 +0.7 170,843 - DVU0134 0.38 +1.1 170,881 + DVU0134 0.42 +0.4 170,881 + DVU0134 0.42 +0.7 170,894 - DVU0134 0.43 -0.3 170,961 + DVU0134 0.50 -0.4 170,973 + DVU0134 0.51 -1.1 170,987 - DVU0134 0.52 -1.8 170,989 - DVU0134 0.53 +0.3 171,022 + DVU0134 0.56 +0.3 171,030 - DVU0134 0.56 -0.1 171,074 + DVU0134 0.61 -0.2 171,118 - DVU0134 0.65 -0.3 171,126 - DVU0134 0.66 -0.3 171,200 + DVU0134 0.73 -0.3 171,276 + DVU0134 0.80 +0.0 171,357 + DVU0134 0.88 +2.2 171,373 - DVU0134 0.89 +0.9 171,385 + -1.0 171,410 + -0.0 171,428 - +0.1 171,555 + +0.4 171,558 - -2.1 171,685 + DVU0135 0.13 +0.1 171,685 + DVU0135 0.13 -0.6 171,718 - DVU0135 0.17 -0.3 171,751 - DVU0135 0.21 +0.1 171,887 + DVU0135 0.36 +0.2 171,887 + DVU0135 0.36 -1.3 171,945 + DVU0135 0.42 +0.1 171,964 - DVU0135 0.44 -0.0 171,968 + DVU0135 0.45 -2.2 171,992 - DVU0135 0.47 +1.2 172,098 - DVU0135 0.59 -0.6 172,098 - DVU0135 0.59 +1.1 172,099 + DVU0135 0.59 +0.1 172,099 + DVU0135 0.59 -1.0 172,183 + DVU0135 0.68 -1.3 172,269 - DVU0135 0.78 +0.7 172,408 + -0.1 172,413 + +0.6
Or see this region's nucleotide sequence