Experiment: MoLS4 with S-adenosyl Homocysteine 50uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1472 and DORF11409 are separated by 321 nucleotides DORF11409 and DVU1474 are separated by 43 nucleotides DVU1474 and DVU1475 are separated by 282 nucleotides
DVU1472: DVU1472 - ATP-dependent protease, putative (TIGR), at 1,552,089 to 1,554,554
DVU1472
DORF11409: DORF11409 - SEED: FIG00606517: hypothetical protein, at 1,554,876 to 1,555,124
DORF11409
DVU1474: DVU1474 - hypothetical protein (TIGR), at 1,555,168 to 1,555,281
DVU1474
DVU1475: DVU1475 - PhoU family protein (TIGR), at 1,555,564 to 1,556,241
DVU1475
Position (kb)
1554
1555
1556 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1553.953 kb on - strand, within DVU1472 at 1553.970 kb on - strand, within DVU1472 at 1553.990 kb on - strand, within DVU1472 at 1554.038 kb on + strand, within DVU1472 at 1554.080 kb on + strand, within DVU1472 at 1554.080 kb on + strand, within DVU1472 at 1554.088 kb on - strand, within DVU1472 at 1554.122 kb on + strand, within DVU1472 at 1554.169 kb on + strand, within DVU1472 at 1554.175 kb on - strand, within DVU1472 at 1554.212 kb on + strand, within DVU1472 at 1554.275 kb on + strand, within DVU1472 at 1554.283 kb on + strand, within DVU1472 at 1554.287 kb on - strand, within DVU1472 at 1554.445 kb on - strand at 1554.556 kb on - strand at 1554.556 kb on - strand at 1554.615 kb on - strand at 1554.842 kb on - strand at 1554.988 kb on - strand, within DORF11409 at 1554.988 kb on - strand, within DORF11409 at 1555.015 kb on + strand, within DORF11409 at 1555.134 kb on + strand at 1555.354 kb on - strand at 1555.425 kb on + strand at 1555.484 kb on + strand at 1555.637 kb on + strand, within DVU1475 at 1555.637 kb on + strand, within DVU1475 at 1556.058 kb on + strand, within DVU1475 at 1556.071 kb on - strand, within DVU1475
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with S-adenosyl Homocysteine 50uM remove 1,553,953 - DVU1472 0.76 -0.6 1,553,970 - DVU1472 0.76 -0.3 1,553,990 - DVU1472 0.77 +0.1 1,554,038 + DVU1472 0.79 -0.0 1,554,080 + DVU1472 0.81 +0.6 1,554,080 + DVU1472 0.81 -0.7 1,554,088 - DVU1472 0.81 -0.8 1,554,122 + DVU1472 0.82 -0.1 1,554,169 + DVU1472 0.84 -0.1 1,554,175 - DVU1472 0.85 +0.0 1,554,212 + DVU1472 0.86 -1.0 1,554,275 + DVU1472 0.89 +0.3 1,554,283 + DVU1472 0.89 -1.8 1,554,287 - DVU1472 0.89 -0.0 1,554,445 - -0.0 1,554,556 - +0.0 1,554,556 - -0.6 1,554,615 - -2.4 1,554,842 - -0.1 1,554,988 - DORF11409 0.45 -1.2 1,554,988 - DORF11409 0.45 -1.1 1,555,015 + DORF11409 0.56 +1.0 1,555,134 + -0.5 1,555,354 - -0.0 1,555,425 + -0.2 1,555,484 + -1.4 1,555,637 + DVU1475 0.11 -1.5 1,555,637 + DVU1475 0.11 +2.0 1,556,058 + DVU1475 0.73 -0.5 1,556,071 - DVU1475 0.75 +0.4
Or see this region's nucleotide sequence