Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26655

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
5,835,848	+		AO353_26650	0.53	-0.8
5,835,924	-				+1.9
5,836,177	+		AO353_26650	0.76	-0.1
5,836,177	+		AO353_26650	0.76	-1.6
5,836,184	+		AO353_26650	0.77	-0.4
5,836,492	+				+0.9
5,836,492	+				-0.1
5,836,492	+				-0.1
5,836,492	+				-2.5
5,836,493	-				+1.9
5,836,493	-				-0.6
5,836,580	+				-1.0
5,836,580	+				-0.7
5,836,601	-				+0.1
5,836,712	+				-0.3
5,836,729	+				+0.9
5,836,745	+				+0.9
5,836,745	+				-0.3
5,836,745	+				-1.3
5,836,745	+				+0.7
5,836,745	+				-1.8
5,836,745	+				-1.0
5,836,745	+				-0.1
5,836,745	+				-0.9
5,836,745	+				-3.2
5,836,745	+				+2.7
5,836,746	-				-0.3
5,836,746	-				-0.3
5,836,746	-				-1.8
5,836,746	-				-0.7
5,836,746	-				-1.1
5,836,746	-				-1.1
5,836,746	-				-2.2
5,836,746	-				+0.6
5,836,746	-				-0.6
5,836,801	+				-0.1
5,836,802	-				-1.3
5,836,808	+				-1.2
5,836,861	+				-0.7
5,836,861	+				-1.3
5,836,862	-				-0.4
5,836,862	-				-1.4
5,836,862	-				-0.9
5,836,862	-				-0.7
5,836,882	+				-1.4
5,836,883	-				-0.9
5,836,883	-				-0.4
5,836,883	-				-1.7
5,836,975	+		AO353_26655	0.15	+1.9
5,837,191	+		AO353_26655	0.36	+0.9
5,837,191	+		AO353_26655	0.36	-2.0
5,837,238	+		AO353_26655	0.41	+0.0
5,837,253	+		AO353_26655	0.43	-0.1
5,837,253	+		AO353_26655	0.43	-0.7
5,837,254	-		AO353_26655	0.43	+0.3
5,837,287	+		AO353_26655	0.46	-0.1
5,837,287	+		AO353_26655	0.46	-0.7
5,837,288	-		AO353_26655	0.46	-1.7
5,837,333	-		AO353_26655	0.50	-1.1
5,837,383	+		AO353_26655	0.55	-1.4
5,837,383	+		AO353_26655	0.55	-2.1
5,837,384	-				+1.9
5,837,443	+		AO353_26655	0.61	-0.3
5,837,443	+		AO353_26655	0.61	-0.1
5,837,443	+		AO353_26655	0.61	-0.9
5,837,443	+		AO353_26655	0.61	-1.6
5,837,444	-		AO353_26655	0.61	+0.4
5,837,708	-		AO353_26655	0.87	-1.7
5,837,770	+				-1.6
5,837,770	+				-0.4
5,837,770	+				-2.2
5,837,771	-				-3.0
5,837,896	+				-1.9
5,837,897	-				+0.3
5,837,910	+				+0.2
5,837,910	+				-1.7
5,837,911	-				-0.1
5,837,911	-				-0.1
5,837,980	+				+0.1
5,837,980	+				-0.4
5,837,981	-				+0.3
5,837,981	-				-0.6
5,837,983	+				-0.0
5,837,983	+				+0.6
5,837,984	-				+1.5
5,837,984	-				-0.4
5,837,984	-				-1.4
5,837,984	-				+0.3
5,837,984	-				-1.6
5,837,984	-				+1.5
5,837,984	-				+1.2
5,837,984	-				+0.7
5,837,984	-				-0.3
5,837,984	-				+0.3
5,837,984	-				-1.1
5,837,984	-				-0.1
5,838,002	+		AO353_26660	0.12	-1.1
5,838,003	-		AO353_26660	0.12	+0.3
5,838,079	-		AO353_26660	0.21	+2.4
5,838,079	-		AO353_26660	0.21	+1.0
5,838,221	+		AO353_26660	0.36	+0.3
5,838,221	+		AO353_26660	0.36	-0.8
5,838,221	+		AO353_26660	0.36	+1.9
5,838,221	+		AO353_26660	0.36	+1.9
5,838,221	+		AO353_26660	0.36	-1.3
5,838,221	+		AO353_26660	0.36	-0.7
5,838,221	+		AO353_26660	0.36	+2.2
5,838,221	+		AO353_26660	0.36	-0.7
5,838,221	+		AO353_26660	0.36	-0.7
5,838,222	-		AO353_26660	0.37	-0.3
5,838,222	-		AO353_26660	0.37	+0.1
5,838,222	-		AO353_26660	0.37	+0.6
5,838,222	-		AO353_26660	0.37	+0.2
5,838,222	-		AO353_26660	0.37	-1.0
5,838,222	-		AO353_26660	0.37	+0.6
5,838,222	-		AO353_26660	0.37	+0.9
5,838,309	+		AO353_26660	0.46	-1.3
5,838,309	+		AO353_26660	0.46	-0.9
5,838,309	+		AO353_26660	0.46	+1.5
5,838,310	-		AO353_26660	0.46	-0.6
5,838,319	+		AO353_26660	0.47	+0.3
5,838,319	+		AO353_26660	0.47	-0.6
5,838,319	+		AO353_26660	0.47	-0.7
5,838,319	+		AO353_26660	0.47	+1.5
5,838,319	+		AO353_26660	0.47	-2.0
5,838,319	+		AO353_26660	0.47	-0.9
5,838,320	-		AO353_26660	0.48	+2.6
5,838,320	-		AO353_26660	0.48	+0.9
5,838,320	-		AO353_26660	0.48	+1.2
5,838,320	-		AO353_26660	0.48	+0.9
5,838,320	-		AO353_26660	0.48	+0.9
5,838,580	+		AO353_26660	0.77	+1.4
5,838,580	+		AO353_26660	0.77	-1.7
5,838,580	+		AO353_26660	0.77	-1.3
5,838,580	+		AO353_26660	0.77	-0.2
5,838,581	-		AO353_26660	0.77	-0.4
5,838,581	-		AO353_26660	0.77	-2.3
5,838,581	-		AO353_26660	0.77	-2.3
5,838,807	+				-1.3
5,838,808	-				+0.2
5,838,808	-				-0.1
5,838,820	+				+0.9
5,838,820	+				-1.4
5,838,820	+				-1.0
5,838,820	+				-0.4