Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26045

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
5,734,845	+		AO353_26035	0.44	-2.2
5,734,845	+		AO353_26035	0.44	-1.3
5,734,845	+		AO353_26035	0.44	-0.2
5,734,845	+		AO353_26035	0.44	+0.5
5,734,845	+		AO353_26035	0.44	-2.3
5,734,845	+		AO353_26035	0.44	+1.9
5,734,846	-		AO353_26035	0.44	+0.6
5,734,846	-		AO353_26035	0.44	-0.4
5,734,846	-		AO353_26035	0.44	-1.3
5,734,850	+		AO353_26035	0.45	-1.3
5,734,850	+		AO353_26035	0.45	-0.9
5,734,882	+		AO353_26035	0.50	+1.2
5,734,882	+		AO353_26035	0.50	+0.9
5,734,882	+		AO353_26035	0.50	-0.9
5,734,883	-		AO353_26035	0.50	-1.2
5,734,883	-		AO353_26035	0.50	-0.4
5,734,916	+		AO353_26035	0.55	+2.3
5,734,916	+		AO353_26035	0.55	-0.9
5,734,916	+		AO353_26035	0.55	-0.7
5,734,916	+		AO353_26035	0.55	-1.0
5,734,995	+		AO353_26035	0.67	+0.6
5,734,995	+		AO353_26035	0.67	-0.3
5,734,995	+		AO353_26035	0.67	+1.9
5,734,996	-		AO353_26035	0.67	-0.9
5,734,996	-		AO353_26035	0.67	+1.9
5,734,996	-		AO353_26035	0.67	-1.4
5,734,996	-		AO353_26035	0.67	-0.9
5,735,037	+		AO353_26035	0.73	-0.8
5,735,037	+		AO353_26035	0.73	+0.9
5,735,037	+		AO353_26035	0.73	-1.6
5,735,037	+		AO353_26035	0.73	-0.6
5,735,037	+		AO353_26035	0.73	+3.5
5,735,037	+		AO353_26035	0.73	-1.1
5,735,038	-		AO353_26035	0.74	-1.1
5,735,258	+				-0.3
5,735,292	+				-0.3
5,735,292	+				+0.9
5,735,292	+				-0.7
5,735,293	-				-0.4
5,735,293	-				-0.5
5,735,293	-				-1.4
5,735,293	-				-1.4
5,735,293	-				-0.7
5,735,293	-				+0.3
5,735,367	+				+1.3
5,735,367	+				-0.5
5,735,368	-				+0.3
5,735,368	-				-0.6
5,735,429	+				+1.6
5,735,429	+				-0.7
5,735,430	-				-0.9
5,735,571	+				-0.4
5,735,571	+				+2.1
5,735,571	+				+0.9
5,735,572	-				-1.3
5,735,572	-				-1.6
5,735,572	-				+0.3
5,735,639	-				+4.2
5,735,642	+				-0.9
5,735,642	+				-0.9
5,735,643	-				-0.7
5,735,643	-				-1.8
5,735,643	-				-0.3
5,735,652	-				-0.8
5,735,684	-				+1.1
5,735,684	-				-1.1
5,735,684	-				-1.4
5,735,684	-				+1.9
5,735,684	-				+0.1
5,735,719	-				+2.6
5,735,733	+				+1.9
5,735,733	+				+1.9
5,735,734	-				+0.5
5,735,759	+				-1.0
5,735,759	+				+3.2
5,735,760	-				+1.9
5,735,760	-				+1.3
5,735,760	-				-0.4
5,735,760	-				+0.8
5,735,760	-				+1.9
5,735,823	+				-0.1
5,735,894	+		AO353_26045	0.18	+0.3
5,735,918	+		AO353_26045	0.25	-1.4
5,735,918	+				-0.4
5,736,059	+		AO353_26045	0.68	-1.1
5,736,060	-		AO353_26045	0.68	-0.9
5,736,060	-		AO353_26045	0.68	-1.4
5,736,060	-		AO353_26045	0.68	+0.9
5,736,139	+				-0.8
5,736,144	-				-1.4
5,736,237	+				-0.8
5,736,348	-				+0.9
5,736,348	-				-0.1
5,736,415	-		AO353_26050	0.19	-0.3
5,736,441	-		AO353_26050	0.26	-1.3
5,736,443	-		AO353_26050	0.27	+1.9
5,736,514	+		AO353_26050	0.47	-1.6
5,736,594	+		AO353_26050	0.69	-0.3
5,736,622	-				+0.9
5,736,674	-				-1.4
5,736,771	+				-0.7
5,736,771	+				+0.7
5,736,771	+				-1.3
5,736,771	+				-1.3
5,736,772	-				-1.1
5,736,772	-				+0.9
5,736,772	-				+0.1
5,736,818	+				-0.5
5,736,819	-				-1.1
5,736,823	+				+0.8
5,736,866	+				-0.1
5,736,886	+		AO353_26055	0.10	-1.8
5,736,907	-		AO353_26055	0.20	+0.4
5,736,913	+		AO353_26055	0.23	-0.4
5,736,925	-		AO353_26055	0.29	-0.1
5,736,940	+		AO353_26055	0.36	-1.0
5,737,082	+				+0.9
5,737,108	-				+0.6
5,737,127	+				+0.6
5,737,127	+				+0.7
5,737,127	+				-0.7
5,737,127	+				+1.0
5,737,128	-				-0.1
5,737,128	-				+0.6
5,737,128	-				+0.3
5,737,128	-				-0.2