Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_23985

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
5,268,653	+		AO353_23980	0.45	-2.5
5,268,653	+		AO353_23980	0.45	+0.9
5,268,653	+		AO353_23980	0.45	+1.4
5,268,653	+		AO353_23980	0.45	+1.6
5,268,653	+		AO353_23980	0.45	-0.9
5,268,653	+		AO353_23980	0.45	-0.5
5,268,653	+		AO353_23980	0.45	-1.0
5,268,653	+		AO353_23980	0.45	+0.5
5,268,653	+		AO353_23980	0.45	+1.9
5,268,654	-		AO353_23980	0.45	-0.5
5,268,654	-		AO353_23980	0.45	-2.9
5,268,654	-		AO353_23980	0.45	+0.7
5,268,654	-		AO353_23980	0.45	+0.5
5,268,654	-		AO353_23980	0.45	-0.0
5,268,654	-		AO353_23980	0.45	-0.7
5,268,654	-		AO353_23980	0.45	-0.7
5,268,715	+		AO353_23980	0.51	+0.5
5,269,023	+				-1.3
5,269,023	+		AO353_23980	0.81	-1.1
5,269,024	-		AO353_23980	0.81	-1.3
5,269,024	-		AO353_23980	0.81	-0.9
5,269,024	-		AO353_23980	0.81	-0.5
5,269,390	+				-0.9
5,269,390	+				+0.3
5,269,390	+				+0.9
5,269,390	+				-0.1
5,269,390	+				-2.2
5,269,391	-				-0.7
5,269,391	-				+0.9
5,269,447	-				+1.4
5,269,496	+				-0.0
5,269,496	+				+0.2
5,269,497	-				+0.6
5,269,497	-				+1.9
5,269,497	-				-1.1
5,269,497	-				-0.9
5,269,497	-				-0.7
5,269,556	+				-0.5
5,269,556	+				-0.5
5,269,557	-				-1.6
5,269,572	+				+1.3
5,269,572	+				-0.5
5,269,573	-				-0.1
5,269,579	+				-0.7
5,269,579	+				+0.4
5,269,580	-				+1.2
5,269,591	+				+0.3
5,269,591	+				+0.2
5,269,591	+				-0.3
5,269,591	+				-0.9
5,269,591	+				+1.2
5,269,592	-				-1.6
5,269,601	+				+1.9
5,269,601	+				+0.3
5,269,601	+				+0.3
5,269,601	+				+0.9
5,269,602	-				-1.9
5,269,602	-				+0.1
5,269,609	+				+3.2
5,269,610	-				-0.1
5,269,610	-				-0.8
5,269,676	+		AO353_23985	0.21	-0.5
5,269,676	+		AO353_23985	0.21	+0.7
5,269,677	-		AO353_23985	0.21	-1.1
5,269,677	-		AO353_23985	0.21	-0.9
5,269,687	+		AO353_23985	0.24	-1.3
5,269,687	+		AO353_23985	0.24	-0.9
5,269,818	+		AO353_23985	0.65	-1.8
5,269,818	+		AO353_23985	0.65	-1.1
5,269,818	+		AO353_23985	0.65	-1.5
5,269,819	-		AO353_23985	0.65	+0.3
5,269,819	-		AO353_23985	0.65	-0.8
5,269,823	-		AO353_23985	0.66	-1.9
5,269,823	-		AO353_23985	0.66	+1.9
5,269,823	-		AO353_23985	0.66	-0.7
5,269,834	-		AO353_23985	0.70	+0.1
5,269,886	+		AO353_23985	0.86	-1.0
5,269,887	-		AO353_23985	0.86	-2.1
5,269,887	-		AO353_23985	0.86	-1.1
5,269,919	+				+1.3
5,269,919	+				+0.3
5,269,919	+				-0.2
5,269,920	-				+0.3
5,269,920	-				+1.1
5,269,920	-				-0.7
5,269,920	-				+0.7
5,270,115	+		AO353_23990	0.12	-0.1
5,270,115	+				-0.7
5,270,115	+		AO353_23990	0.12	+0.1
5,270,115	+		AO353_23990	0.12	-0.6
5,270,116	-		AO353_23990	0.12	+0.2
5,270,116	-		AO353_23990	0.12	-0.7
5,270,116	-		AO353_23990	0.12	-0.5
5,270,116	-		AO353_23990	0.12	-0.1
5,270,116	-		AO353_23990	0.12	-0.3
5,270,116	-		AO353_23990	0.12	-2.0
5,270,116	-		AO353_23990	0.12	-0.7
5,270,156	+		AO353_23990	0.15	+0.4
5,270,179	+		AO353_23990	0.17	-0.1
5,270,180	-		AO353_23990	0.17	-1.9
5,270,180	-		AO353_23990	0.17	+1.3
5,270,281	+		AO353_23990	0.26	-1.3
5,270,281	+		AO353_23990	0.26	+0.9
5,270,369	+		AO353_23990	0.33	-1.8
5,270,370	-		AO353_23990	0.33	-0.7
5,270,370	-		AO353_23990	0.33	-0.7
5,270,416	+		AO353_23990	0.37	-0.9
5,270,416	+		AO353_23990	0.37	+0.9
5,270,416	+		AO353_23990	0.37	+1.1
5,270,417	-		AO353_23990	0.37	-0.6
5,270,417	-		AO353_23990	0.37	-1.5
5,270,417	-		AO353_23990	0.37	+0.1
5,270,417	-		AO353_23990	0.37	-1.7
5,270,417	-		AO353_23990	0.37	+0.5
5,270,605	+		AO353_23990	0.52	-0.8
5,270,605	+		AO353_23990	0.52	-1.8
5,270,605	+		AO353_23990	0.52	-0.1
5,270,605	+		AO353_23990	0.52	-0.5
5,270,606	-		AO353_23990	0.52	+0.5
5,270,606	-		AO353_23990	0.52	+1.6
5,270,606	-		AO353_23990	0.52	+0.9
5,270,606	-		AO353_23990	0.52	-0.1
5,270,606	-		AO353_23990	0.52	+0.9
5,270,608	+		AO353_23990	0.52	+0.7
5,270,608	+		AO353_23990	0.52	+0.1
5,270,608	+		AO353_23990	0.52	+0.9
5,270,609	-		AO353_23990	0.52	+1.1
5,270,609	-		AO353_23990	0.52	-0.4
5,270,609	-		AO353_23990	0.52	-0.1
5,270,609	-		AO353_23990	0.52	-0.7
5,270,733	+		AO353_23990	0.62	-0.5
5,270,733	+		AO353_23990	0.62	-0.7
5,270,834	-		AO353_23990	0.71	-1.7
5,270,834	-		AO353_23990	0.71	-2.4
5,270,851	+		AO353_23990	0.72	-0.5
5,270,852	-		AO353_23990	0.72	-0.7
5,270,855	-		AO353_23990	0.72	-1.3
5,270,855	-		AO353_23990	0.72	-0.9
5,270,855	-		AO353_23990	0.72	-0.9
5,270,855	-		AO353_23990	0.72	+0.5
5,270,890	+		AO353_23990	0.75	-1.8
5,270,890	+		AO353_23990	0.75	+0.2
5,270,890	+		AO353_23990	0.75	-0.9
5,270,891	-		AO353_23990	0.75	-0.0