Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21320

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,665,480	+		AO353_21315	0.41	-0.8
4,665,480	+		AO353_21315	0.41	+1.8
4,665,480	+		AO353_21315	0.41	+1.2
4,665,480	+		AO353_21315	0.41	-1.1
4,665,480	+		AO353_21315	0.41	+0.0
4,665,480	+		AO353_21315	0.41	+0.5
4,665,481	-		AO353_21315	0.41	-1.2
4,665,481	-		AO353_21315	0.41	-0.7
4,665,481	-		AO353_21315	0.41	-0.7
4,665,481	-		AO353_21315	0.41	+1.5
4,665,481	-		AO353_21315	0.41	-1.0
4,665,481	-		AO353_21315	0.41	+0.0
4,665,481	-		AO353_21315	0.41	-0.8
4,665,481	-		AO353_21315	0.41	-1.2
4,665,481	-		AO353_21315	0.41	+0.8
4,665,481	-		AO353_21315	0.41	+1.8
4,665,507	+		AO353_21315	0.44	-0.6
4,665,507	+		AO353_21315	0.44	-2.3
4,665,507	+		AO353_21315	0.44	-0.1
4,665,732	+		AO353_21315	0.65	+1.8
4,665,732	+		AO353_21315	0.65	-0.5
4,665,732	+		AO353_21315	0.65	+0.8
4,665,733	-		AO353_21315	0.65	-0.6
4,665,733	-		AO353_21315	0.65	+1.8
4,666,026	+				+0.8
4,666,027	-				-0.7
4,666,027	-				+2.1
4,666,027	-				-1.2
4,666,115	-				-0.6
4,666,115	-				-1.2
4,666,157	+				+0.4
4,666,158	-				-0.6
4,666,201	+				-0.6
4,666,202	-				-1.4
4,666,202	-				-1.2
4,666,245	-				+0.8
4,666,263	+				-1.0
4,666,264	-				-0.4
4,666,264	-				+1.4
4,666,288	+				+0.2
4,666,289	-				+0.8
4,666,327	-				-0.2
4,666,488	+		AO353_21320	0.33	+2.4
4,666,566	+		AO353_21320	0.46	-1.8
4,666,566	+		AO353_21320	0.46	-2.2
4,666,567	-		AO353_21320	0.46	-0.8
4,666,569	+		AO353_21320	0.47	+0.8
4,666,570	-		AO353_21320	0.47	-1.1
4,666,689	+		AO353_21320	0.66	-1.7
4,666,843	+				-0.1
4,666,859	+				-0.6
4,666,859	+				+1.8
4,666,859	+				-0.6
4,666,859	+				-0.2
4,666,859	+				+0.8
4,666,859	+				+1.2
4,666,859	+				+0.8
4,666,859	+				+0.4
4,666,860	-				-0.6
4,666,860	-				+0.9
4,666,860	-				+0.8
4,666,860	-				-0.4
4,666,860	-				-1.0
4,666,860	-				-0.6
4,666,860	-				+1.8
4,666,860	-				-2.6
4,666,860	-				-2.2
4,666,860	-				+1.4
4,666,863	+				-1.6
4,666,863	+				+0.4
4,666,863	+				-0.8
4,666,863	+				-2.3
4,666,863	+				-0.6
4,666,863	+				-0.3
4,666,863	+				+1.8
4,666,864	-				-1.7
4,666,864	-				+0.7
4,666,864	-				-1.6
4,666,864	-				+0.4
4,666,864	-				+2.4
4,666,864	-				+0.2
4,666,864	-				-0.2
4,666,864	-				+0.8
4,666,864	-				-0.6
4,666,864	-				+0.4
4,666,864	-				+0.2
4,666,896	+				-1.9
4,666,896	+				-0.4
4,666,896	+				-0.5
4,666,896	+				+1.4
4,666,896	+				-0.5
4,666,896	+				+1.8
4,666,896	+				-0.6
4,666,896	+				-1.0
4,666,897	-				-0.1
4,666,897	-				-0.7
4,666,897	-				-1.7
4,666,897	-				+0.8
4,666,897	-				-1.2
4,666,897	-				-1.8
4,666,911	-				-0.6
4,666,917	+				+0.3
4,666,917	+				+0.8
4,666,917	+				+0.4
4,666,918	-				-0.6
4,666,918	-				-1.6
4,666,937	+				+0.2
4,666,938	-				+0.8
4,666,984	-				-0.2
4,666,984	-				-0.5
4,666,997	+				+0.2
4,666,997	+				+0.3
4,666,998	-				-0.8
4,666,998	-				-1.7
4,666,998	-				-0.8
4,666,998	-				-1.2
4,666,998	-				-0.2
4,666,998	-				+0.1
4,666,998	-				+0.1
4,667,171	+		AO353_21325	0.16	+1.3
4,667,171	+		AO353_21325	0.16	-1.7
4,667,171	+		AO353_21325	0.16	-0.2
4,667,171	+		AO353_21325	0.16	+0.8
4,667,171	+		AO353_21325	0.16	-0.2
4,667,171	+		AO353_21325	0.16	-0.1
4,667,172	-		AO353_21325	0.16	+0.8
4,667,172	-		AO353_21325	0.16	-1.9
4,667,172	-		AO353_21325	0.16	-1.7
4,667,172	-		AO353_21325	0.16	+1.2
4,667,539	+		AO353_21325	0.57	+0.2
4,667,539	+		AO353_21325	0.57	-0.8
4,667,540	-		AO353_21325	0.57	-0.0
4,667,540	-		AO353_21325	0.57	-1.5
4,667,561	+		AO353_21325	0.60	-0.2
4,667,561	+		AO353_21325	0.60	-0.9
4,667,562	-		AO353_21325	0.60	+0.1
4,667,702	+		AO353_21325	0.75	+1.0
4,667,702	+		AO353_21325	0.75	+0.8
4,667,702	+		AO353_21325	0.75	+0.8
4,667,703	-		AO353_21325	0.75	+0.5
4,667,703	-		AO353_21325	0.75	-1.5
4,667,801	+		AO353_21325	0.86	-2.4
4,667,802	-		AO353_21325	0.86	-2.2