Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19625

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,300,108	+				-0.9
4,300,108	+				+0.7
4,300,108	+				+0.1
4,300,109	-				+0.1
4,300,109	-				+0.1
4,300,110	+				-0.7
4,300,111	-				+1.2
4,300,111	-				+1.3
4,300,129	+				+1.1
4,300,323	+		AO353_19620	0.26	+1.7
4,300,324	-		AO353_19620	0.26	-0.6
4,300,324	-		AO353_19620	0.26	+0.4
4,300,324	-		AO353_19620	0.26	-1.5
4,300,324	-		AO353_19620	0.26	+0.7
4,300,386	+		AO353_19620	0.32	-0.5
4,300,386	+		AO353_19620	0.32	-0.1
4,300,386	+		AO353_19620	0.32	+1.4
4,300,386	+		AO353_19620	0.32	+1.7
4,300,386	+		AO353_19620	0.32	-1.1
4,300,386	+		AO353_19620	0.32	-1.5
4,300,386	+		AO353_19620	0.32	-0.5
4,300,387	-				-1.1
4,300,387	-		AO353_19620	0.32	+0.1
4,300,387	-		AO353_19620	0.32	+0.1
4,300,387	-		AO353_19620	0.32	+0.7
4,300,387	-				-0.3
4,300,387	-		AO353_19620	0.32	-2.0
4,300,387	-		AO353_19620	0.32	-0.9
4,300,387	-		AO353_19620	0.32	-0.9
4,300,387	-		AO353_19620	0.32	+2.7
4,300,407	+		AO353_19620	0.35	-0.2
4,300,407	+		AO353_19620	0.35	-1.1
4,300,407	+		AO353_19620	0.35	-1.2
4,300,407	+		AO353_19620	0.35	-1.9
4,300,407	+		AO353_19620	0.35	+0.5
4,300,407	+		AO353_19620	0.35	-0.2
4,300,407	+		AO353_19620	0.35	-1.0
4,300,408	-		AO353_19620	0.35	-0.5
4,300,408	-		AO353_19620	0.35	+0.4
4,300,408	-		AO353_19620	0.35	-1.4
4,300,408	-		AO353_19620	0.35	-1.1
4,300,480	-		AO353_19620	0.42	-1.2
4,300,530	+		AO353_19620	0.47	-0.5
4,300,530	+		AO353_19620	0.47	-0.3
4,300,530	+		AO353_19620	0.47	+2.7
4,300,531	-		AO353_19620	0.48	-1.5
4,300,531	-		AO353_19620	0.48	-0.8
4,300,581	+		AO353_19620	0.53	+1.1
4,300,581	+		AO353_19620	0.53	-0.3
4,300,581	+		AO353_19620	0.53	+1.4
4,300,581	+		AO353_19620	0.53	-1.3
4,300,581	+		AO353_19620	0.53	+2.7
4,300,582	-		AO353_19620	0.53	-0.0
4,300,582	-		AO353_19620	0.53	+0.7
4,300,582	-		AO353_19620	0.53	-1.5
4,300,582	-		AO353_19620	0.53	-1.3
4,300,582	-		AO353_19620	0.53	-0.2
4,300,582	-		AO353_19620	0.53	+0.7
4,300,701	+		AO353_19620	0.65	+1.1
4,300,701	+		AO353_19620	0.65	-2.1
4,300,702	-		AO353_19620	0.65	+2.1
4,300,702	-		AO353_19620	0.65	-1.9
4,300,713	+		AO353_19620	0.67	+1.3
4,300,713	+		AO353_19620	0.67	-1.6
4,300,713	+		AO353_19620	0.67	-0.9
4,300,713	+		AO353_19620	0.67	+0.7
4,300,713	+		AO353_19620	0.67	-1.5
4,300,713	+		AO353_19620	0.67	-0.1
4,300,714	-		AO353_19620	0.67	-0.3
4,300,714	-		AO353_19620	0.67	-0.9
4,300,714	-		AO353_19620	0.67	-1.5
4,300,714	-		AO353_19620	0.67	+0.7
4,300,803	+		AO353_19620	0.76	-1.3
4,300,803	+		AO353_19620	0.76	+1.0
4,300,857	+		AO353_19620	0.82	-0.9
4,300,858	-		AO353_19620	0.82	-1.0
4,300,858	-		AO353_19620	0.82	-1.6
4,300,881	+		AO353_19620	0.84	-0.6
4,300,881	+		AO353_19620	0.84	-0.1
4,300,881	+		AO353_19620	0.84	-0.5
4,300,881	+		AO353_19620	0.84	+0.7
4,300,881	+		AO353_19620	0.84	-2.0
4,300,881	+		AO353_19620	0.84	-0.6
4,300,881	+		AO353_19620	0.84	+0.1
4,300,881	+		AO353_19620	0.84	+1.7
4,300,881	+		AO353_19620	0.84	+0.7
4,300,882	-		AO353_19620	0.84	-2.0
4,300,882	-		AO353_19620	0.84	+0.8
4,300,882	-		AO353_19620	0.84	-0.8
4,300,882	-		AO353_19620	0.84	+0.1
4,300,882	-		AO353_19620	0.84	-2.5
4,300,882	-		AO353_19620	0.84	-0.9
4,300,882	-		AO353_19620	0.84	+0.5
4,300,882	-		AO353_19620	0.84	-1.8
4,300,882	-		AO353_19620	0.84	-0.6
4,300,882	-		AO353_19620	0.84	+0.1
4,300,882	-		AO353_19620	0.84	+0.5
4,300,882	-		AO353_19620	0.84	-0.9
4,300,923	+		AO353_19620	0.89	+2.6
4,300,923	+		AO353_19620	0.89	+0.7
4,300,924	-		AO353_19620	0.89	-1.1
4,300,929	+		AO353_19620	0.89	-1.8
4,300,929	+		AO353_19620	0.89	+0.4
4,300,929	+		AO353_19620	0.89	+0.9
4,300,929	+		AO353_19620	0.89	-0.4
4,300,929	+		AO353_19620	0.89	+0.5
4,300,929	+		AO353_19620	0.89	+2.7
4,300,929	+		AO353_19620	0.89	-0.9
4,300,929	+		AO353_19620	0.89	-0.9
4,300,929	+		AO353_19620	0.89	+0.1
4,300,930	-		AO353_19620	0.89	-1.0
4,300,930	-		AO353_19620	0.89	-0.4
4,300,930	-		AO353_19620	0.89	-0.6
4,300,930	-		AO353_19620	0.89	-1.0
4,300,930	-		AO353_19620	0.89	+2.0
4,300,947	+				+1.7
4,300,947	+				+1.3
4,300,948	-				+0.7
4,300,948	-				+0.7
4,300,948	-				-0.6
4,300,948	-				-0.0
4,301,052	+				+0.1
4,301,052	+				-0.2
4,301,053	-				-0.2
4,301,053	-				+3.0
4,301,053	-				-0.9
4,301,053	-				-1.3
4,301,280	+		AO353_19625	0.38	+0.1
4,301,280	+		AO353_19625	0.38	-0.3
4,301,280	+		AO353_19625	0.38	+0.7
4,301,281	-		AO353_19625	0.38	-0.6
4,301,281	-		AO353_19625	0.38	-1.5
4,301,281	-		AO353_19625	0.38	-1.3
4,301,281	-				-1.8
4,301,457	+		AO353_19625	0.71	+1.3
4,301,458	-		AO353_19625	0.71	+3.5
4,301,486	+		AO353_19625	0.76	+0.7
4,301,487	-		AO353_19625	0.76	+2.9
4,301,531	+		AO353_19625	0.84	+0.1
4,301,600	+				-1.0
4,301,812	+				-1.8
4,301,832	+				-1.4
4,301,836	+				+0.3
4,301,840	+				+1.7
4,301,840	+				+1.7
4,301,840	+				-2.2
4,301,970	+				+0.2
4,301,971	-				+0.1
4,302,022	-				-1.4
4,302,158	+				-1.4
4,302,159	-				+0.7
4,302,288	+				-2.4
4,302,288	+				-1.5
4,302,289	-				-0.5
4,302,289	-				+0.5
4,302,406	+				+2.3
4,302,406	+				-1.3
4,302,505	+				-0.7
4,302,505	+				-1.0
4,302,505	+				-2.0
4,302,505	+				-0.3
4,302,505	+				+1.3