Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16845

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
3,726,805	+		AO353_16835	0.35	-0.2
3,727,055	+		AO353_16835	0.73	+1.3
3,727,055	+		AO353_16835	0.73	-1.6
3,727,100	-		AO353_16835	0.80	-0.7
3,727,251	+				-0.4
3,727,266	+				+1.0
3,727,267	-				+1.6
3,727,267	-				+1.6
3,727,275	+				+1.8
3,727,297	+				-0.5
3,727,297	+				+1.6
3,727,297	+				-0.7
3,727,298	-				+0.6
3,727,298	-				+0.6
3,727,298	-				+1.6
3,727,302	+				+0.6
3,727,302	+				+0.2
3,727,302	+				-0.4
3,727,302	+				+0.0
3,727,302	+				+0.6
3,727,302	+				+1.6
3,727,302	+				+2.6
3,727,302	+				+1.6
3,727,302	+				+2.6
3,727,302	+				+1.6
3,727,302	+				+3.2
3,727,302	+				+2.2
3,727,302	+				+0.2
3,727,302	+				+1.6
3,727,302	+				+0.6
3,727,302	+				+0.4
3,727,302	+				-1.1
3,727,302	+				+1.6
3,727,302	+				-1.2
3,727,303	-				+1.6
3,727,303	-				+0.0
3,727,303	-				+1.6
3,727,303	-				+0.6
3,727,303	-				+0.6
3,727,616	+		AO353_16840	0.86	+1.6
3,727,617	-		AO353_16840	0.87	+1.6
3,727,617	-		AO353_16840	0.87	+1.6
3,727,664	-				+0.6
3,727,759	+		AO353_16845	0.10	-1.9
3,727,759	+		AO353_16845	0.10	+1.3
3,727,759	+		AO353_16845	0.10	-0.4
3,727,759	+		AO353_16845	0.10	-2.8
3,727,759	+		AO353_16845	0.10	-2.3
3,727,759	+		AO353_16845	0.10	+0.7
3,727,759	+		AO353_16845	0.10	+0.6
3,727,760	-		AO353_16845	0.11	+1.6
3,727,760	-		AO353_16845	0.11	-1.4
3,727,769	+		AO353_16845	0.12	-1.7
3,727,770	-		AO353_16845	0.12	+0.6
3,727,783	+		AO353_16845	0.13	-2.0
3,727,783	+		AO353_16845	0.13	-1.0
3,727,869	+		AO353_16845	0.22	-0.7
3,727,869	+		AO353_16845	0.22	-1.1
3,727,870	-		AO353_16845	0.22	-1.4
3,727,871	+		AO353_16845	0.23	-0.4
3,727,871	+		AO353_16845	0.23	-1.9
3,727,871	+		AO353_16845	0.23	+1.6
3,727,871	+		AO353_16845	0.23	-1.0
3,727,871	+		AO353_16845	0.23	-1.0
3,727,871	+		AO353_16845	0.23	-1.2
3,727,871	+		AO353_16845	0.23	-2.9
3,727,871	+		AO353_16845	0.23	-2.6
3,727,871	+		AO353_16845	0.23	-2.3
3,727,871	+		AO353_16845	0.23	-1.0
3,727,871	+		AO353_16845	0.23	-0.7
3,727,871	+		AO353_16845	0.23	-1.0
3,727,871	+		AO353_16845	0.23	-1.0
3,727,872	-		AO353_16845	0.23	-1.7
3,727,872	-		AO353_16845	0.23	-0.6
3,727,872	-		AO353_16845	0.23	+0.0
3,727,872	-		AO353_16845	0.23	-1.0
3,727,872	-		AO353_16845	0.23	+0.6
3,727,872	-		AO353_16845	0.23	-1.2
3,727,872	-		AO353_16845	0.23	-0.2
3,727,872	-		AO353_16845	0.23	-1.7
3,727,872	-		AO353_16845	0.23	-1.2
3,727,872	-		AO353_16845	0.23	-3.7
3,727,872	-		AO353_16845	0.23	-2.0
3,727,872	-		AO353_16845	0.23	+0.3
3,727,872	-		AO353_16845	0.23	-0.7
3,727,872	-		AO353_16845	0.23	+0.0
3,727,940	+		AO353_16845	0.30	-0.4
3,727,941	-		AO353_16845	0.30	-0.7
3,727,941	-		AO353_16845	0.30	-1.0
3,728,118	+		AO353_16845	0.49	-1.2
3,728,118	+		AO353_16845	0.49	+0.0
3,728,118	+		AO353_16845	0.49	-1.8
3,728,118	+		AO353_16845	0.49	-0.8
3,728,118	+		AO353_16845	0.49	-0.3
3,728,119	-		AO353_16845	0.49	-1.9
3,728,119	-		AO353_16845	0.49	+1.0
3,728,119	-		AO353_16845	0.49	+1.6
3,728,119	-		AO353_16845	0.49	+0.0
3,728,155	-		AO353_16845	0.53	+1.0
3,728,173	+		AO353_16845	0.55	+0.2
3,728,278	+		AO353_16845	0.66	+2.2
3,728,278	+		AO353_16845	0.66	-0.6
3,728,279	-		AO353_16845	0.67	+0.6
3,728,574	+				+0.3
3,728,574	+				-0.9
3,728,574	+				+1.6
3,728,579	+				+1.0
3,728,588	+				+1.6
3,728,592	+				+1.1
3,728,634	+				-2.0
3,728,634	+				-1.2
3,728,649	+				+0.6
3,728,649	+				+1.3
3,728,649	+				+0.3
3,729,502	+				-0.4
3,729,502	+				+2.1
3,729,502	+				+0.0
3,729,502	+				-1.1
3,729,502	+				+0.6
3,729,502	+				-2.2
3,729,502	+				-0.3
3,729,502	+				-1.9
3,729,502	+				+0.1
3,729,503	-				+0.6
3,729,503	-				-0.1
3,729,503	-				-0.4
3,729,503	-				-0.7
3,729,503	-				+1.6
3,729,503	-				+1.4
3,729,503	-				-0.4