Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16155

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
3,582,063	+		AO353_16150	0.42	-2.1
3,582,064	-		AO353_16150	0.42	-2.3
3,582,091	+		AO353_16150	0.43	-1.6
3,582,091	+		AO353_16150	0.43	-1.2
3,582,091	+		AO353_16150	0.43	+1.0
3,582,092	-		AO353_16150	0.44	+1.6
3,582,092	-		AO353_16150	0.44	-0.7
3,582,092	-		AO353_16150	0.44	+1.6
3,582,092	-		AO353_16150	0.44	+0.5
3,582,092	-		AO353_16150	0.44	-0.4
3,582,092	-		AO353_16150	0.44	-0.4
3,582,093	+		AO353_16150	0.44	-0.6
3,582,093	+		AO353_16150	0.44	-2.1
3,582,093	+		AO353_16150	0.44	-1.2
3,582,093	+		AO353_16150	0.44	+0.4
3,582,093	+		AO353_16150	0.44	-1.2
3,582,094	-		AO353_16150	0.44	-0.2
3,582,094	-		AO353_16150	0.44	-1.2
3,582,094	-		AO353_16150	0.44	+1.6
3,582,094	-		AO353_16150	0.44	-2.5
3,582,094	-		AO353_16150	0.44	-0.8
3,582,094	-		AO353_16150	0.44	-1.6
3,582,094	-		AO353_16150	0.44	-2.3
3,582,094	-		AO353_16150	0.44	-0.6
3,582,160	+		AO353_16150	0.48	+2.0
3,582,160	+		AO353_16150	0.48	+1.9
3,582,160	+		AO353_16150	0.48	+1.0
3,582,160	+		AO353_16150	0.48	+0.0
3,582,160	+		AO353_16150	0.48	+0.2
3,582,161	-		AO353_16150	0.48	+0.0
3,582,161	-		AO353_16150	0.48	-0.7
3,582,161	-		AO353_16150	0.48	+0.6
3,582,161	-		AO353_16150	0.48	-1.2
3,582,161	-		AO353_16150	0.48	-1.2
3,582,164	+		AO353_16150	0.48	-0.8
3,582,164	+		AO353_16150	0.48	-0.1
3,582,164	+		AO353_16150	0.48	-0.3
3,582,164	+		AO353_16150	0.48	+0.4
3,582,165	-		AO353_16150	0.48	+0.8
3,582,165	-		AO353_16150	0.48	-0.6
3,582,165	-		AO353_16150	0.48	-0.8
3,582,165	-		AO353_16150	0.48	+1.6
3,582,165	-		AO353_16150	0.48	-0.8
3,582,243	-		AO353_16150	0.53	+0.5
3,582,249	+		AO353_16150	0.53	-0.4
3,582,250	-		AO353_16150	0.53	-0.7
3,582,250	-		AO353_16150	0.53	-1.1
3,582,253	+		AO353_16150	0.53	-1.7
3,582,253	+		AO353_16150	0.53	+0.4
3,582,253	+		AO353_16150	0.53	+2.0
3,582,253	+		AO353_16150	0.53	-0.4
3,582,253	+		AO353_16150	0.53	+1.3
3,582,253	+		AO353_16150	0.53	-2.3
3,582,254	-		AO353_16150	0.53	-1.1
3,582,254	-		AO353_16150	0.53	-0.3
3,582,254	-		AO353_16150	0.53	-0.4
3,582,254	-		AO353_16150	0.53	-1.6
3,582,305	+		AO353_16150	0.57	-0.3
3,582,306	-		AO353_16150	0.57	-1.6
3,582,319	+		AO353_16150	0.57	+1.0
3,582,319	+		AO353_16150	0.57	-0.9
3,582,320	-		AO353_16150	0.58	+0.0
3,582,320	-		AO353_16150	0.58	-0.5
3,582,320	-		AO353_16150	0.58	+0.0
3,582,320	-		AO353_16150	0.58	-0.1
3,582,320	-		AO353_16150	0.58	-0.2
3,582,320	-		AO353_16150	0.58	+2.0
3,582,450	+		AO353_16150	0.66	+0.3
3,582,450	+		AO353_16150	0.66	+0.4
3,582,450	+		AO353_16150	0.66	+0.2
3,582,450	+		AO353_16150	0.66	-1.4
3,582,451	-		AO353_16150	0.66	-1.6
3,582,451	-		AO353_16150	0.66	-0.2
3,582,451	-		AO353_16150	0.66	-0.7
3,582,451	-		AO353_16150	0.66	+0.6
3,582,457	+		AO353_16150	0.66	-0.1
3,582,457	+		AO353_16150	0.66	-0.1
3,582,457	+		AO353_16150	0.66	-0.6
3,582,457	+		AO353_16150	0.66	-0.8
3,582,457	+		AO353_16150	0.66	-0.7
3,582,457	+		AO353_16150	0.66	+0.8
3,582,457	+		AO353_16150	0.66	-0.4
3,582,457	+		AO353_16150	0.66	-1.0
3,582,457	+		AO353_16150	0.66	-0.7
3,582,457	+		AO353_16150	0.66	-2.0
3,582,457	+		AO353_16150	0.66	+0.0
3,582,458	-		AO353_16150	0.66	+0.6
3,582,458	-		AO353_16150	0.66	-0.1
3,582,458	-		AO353_16150	0.66	+0.2
3,582,458	-		AO353_16150	0.66	+1.1
3,582,528	+		AO353_16150	0.70	+0.2
3,582,529	-		AO353_16150	0.70	-0.2
3,582,577	+		AO353_16150	0.73	-1.0
3,582,584	-		AO353_16150	0.74	+2.0
3,582,586	+		AO353_16150	0.74	-1.0
3,582,586	+		AO353_16150	0.74	+1.6
3,582,586	+		AO353_16150	0.74	+1.2
3,582,586	+		AO353_16150	0.74	+2.0
3,582,586	+		AO353_16150	0.74	-1.7
3,582,598	+		AO353_16150	0.75	+0.0
3,582,598	+		AO353_16150	0.75	-1.4
3,582,598	+		AO353_16150	0.75	+0.5
3,582,599	-		AO353_16150	0.75	+0.6
3,582,601	+		AO353_16150	0.75	-0.7
3,582,601	+		AO353_16150	0.75	-0.4
3,582,601	+		AO353_16150	0.75	+0.9
3,582,601	+		AO353_16150	0.75	+1.0
3,582,601	+		AO353_16150	0.75	+0.6
3,582,602	-		AO353_16150	0.75	-1.0
3,582,602	-		AO353_16150	0.75	-0.1
3,582,602	-		AO353_16150	0.75	-0.2
3,582,602	-		AO353_16150	0.75	+0.0
3,582,602	-		AO353_16150	0.75	-0.8
3,582,632	-		AO353_16150	0.77	-2.5
3,582,677	-		AO353_16150	0.79	-0.4
3,582,697	+		AO353_16150	0.81	-0.7
3,582,697	+		AO353_16150	0.81	+0.6
3,582,698	-		AO353_16150	0.81	-1.4
3,582,698	-		AO353_16150	0.81	-1.0
3,582,698	-		AO353_16150	0.81	-0.5
3,582,698	-		AO353_16150	0.81	+0.6
3,582,698	-		AO353_16150	0.81	-1.0
3,582,740	+		AO353_16150	0.83	+0.6
3,582,741	-		AO353_16150	0.83	-0.4
3,582,741	-		AO353_16150	0.83	-0.7
3,582,865	+				+0.0
3,582,865	+				+1.5
3,582,865	+				+1.6
3,582,865	+				+1.0
3,582,865	+				-2.0
3,582,865	+				+0.9
3,582,865	+				-1.2
3,582,865	+				-1.0
3,582,866	-				-1.7
3,582,866	-				-0.7
3,582,866	-				-0.4
3,582,866	-				-1.1
3,582,866	-				+1.6
3,582,953	-				+0.3
3,582,953	-				+0.0
3,582,959	+				-1.0
3,582,959	+				+0.0
3,582,960	-				+0.6
3,582,960	-				-1.4
3,583,013	+				-2.3
3,583,013	+				+1.6
3,583,013	+				+2.9
3,583,013	+				+0.8
3,583,013	+				-2.4
3,583,014	-				+0.6
3,583,014	-				+2.9
3,583,014	-				-1.3
3,583,038	+				-1.2
3,583,038	+				-2.2
3,583,038	+				-1.0
3,583,038	+				-0.4
3,583,038	+				-1.6
3,583,038	+				-1.2
3,583,039	-				+1.4
3,583,039	-				-1.6
3,583,039	-				-0.1
3,583,039	-				-0.4
3,583,039	-				-0.4
3,583,096	-		AO353_16155	0.15	-1.2
3,583,225	-		AO353_16155	0.61	-1.2
3,583,272	+		AO353_16155	0.77	-1.3
3,583,272	+		AO353_16155	0.77	+0.6
3,583,273	-		AO353_16155	0.78	-0.9
3,583,273	-		AO353_16155	0.78	-1.6
3,583,294	+		AO353_16155	0.85	+1.6
3,583,326	-				+0.9
3,583,326	-				+0.0
3,583,326	-				-0.7
3,583,382	+				+2.2
3,583,382	+				+0.0
3,583,383	-				+0.0
3,583,389	+				+1.6
3,583,389	+				+0.0
3,583,389	+				-1.2
3,583,389	+				-0.6
3,583,389	+				-0.2
3,583,390	-				-1.4
3,583,390	-				-1.0
3,583,423	+				+0.4
3,583,424	-				+0.0
3,583,455	+				-1.4
3,583,455	+				-1.0
3,583,455	+				-2.6
3,583,456	-				+0.6
3,583,456	-				+0.9
3,583,456	-				-1.6
3,583,456	-				-1.0
3,583,456	-				+0.0
3,583,456	-				+1.6
3,583,554	-				-1.4
3,583,900	+		AO353_16160	0.31	-0.7
3,583,900	+		AO353_16160	0.31	+0.0
3,583,900	+		AO353_16160	0.31	-1.2
3,583,900	+		AO353_16160	0.31	-0.3
3,583,901	-		AO353_16160	0.31	-0.4
3,583,901	-		AO353_16160	0.31	+1.4
3,583,901	-		AO353_16160	0.31	+0.9
3,584,228	+		AO353_16160	0.52	+0.4
3,584,230	+		AO353_16160	0.52	-0.3
3,584,230	+		AO353_16160	0.52	-2.0
3,584,230	+		AO353_16160	0.52	+0.8
3,584,230	+		AO353_16160	0.52	+1.1
3,584,230	+		AO353_16160	0.52	-0.7
3,584,230	+		AO353_16160	0.52	+1.0
3,584,230	+		AO353_16160	0.52	-1.0
3,584,231	-		AO353_16160	0.52	+0.9
3,584,231	-		AO353_16160	0.52	+1.6
3,584,231	-		AO353_16160	0.52	-1.0
3,584,231	-		AO353_16160	0.52	-1.9
3,584,297	+		AO353_16160	0.56	-0.3
3,584,297	+		AO353_16160	0.56	-0.1
3,584,298	-		AO353_16160	0.56	+0.0