Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15075

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
3,334,978	+		AO353_15065	0.56	-0.8
3,334,979	-		AO353_15065	0.56	-0.2
3,334,979	-		AO353_15065	0.56	-1.4
3,334,979	-		AO353_15065	0.56	+2.2
3,335,081	+		AO353_15065	0.71	+1.2
3,335,081	+		AO353_15065	0.71	-0.4
3,335,082	-		AO353_15065	0.71	-0.7
3,335,137	+		AO353_15065	0.80	+0.3
3,335,137	+		AO353_15065	0.80	+1.0
3,335,137	+		AO353_15065	0.80	+0.8
3,335,137	+		AO353_15065	0.80	-1.2
3,335,137	+		AO353_15065	0.80	-1.2
3,335,138	-		AO353_15065	0.80	-1.0
3,335,138	-		AO353_15065	0.80	-1.2
3,335,138	-		AO353_15065	0.80	-0.3
3,335,138	-		AO353_15065	0.80	-0.4
3,335,270	+				-0.7
3,335,270	+				+1.6
3,335,270	+				-0.2
3,335,270	+				+0.6
3,335,270	+				-2.1
3,335,270	+				+1.6
3,335,271	-				-0.4
3,335,271	-				-0.5
3,335,271	-				+1.0
3,335,271	-				-0.4
3,335,271	-				-1.4
3,335,297	-				-0.7
3,335,371	-				-1.7
3,335,371	-				-0.4
3,335,371	-				-0.2
3,335,371	-				+1.0
3,335,442	+		AO353_15070	0.14	+1.6
3,335,443	-		AO353_15070	0.14	+0.1
3,335,443	-		AO353_15070	0.14	-0.0
3,335,443	-		AO353_15070	0.14	+0.2
3,335,443	-		AO353_15070	0.14	+0.8
3,335,443	-		AO353_15070	0.14	+2.0
3,335,443	-		AO353_15070	0.14	-0.4
3,335,495	+		AO353_15070	0.34	-0.4
3,335,495	+		AO353_15070	0.34	-1.8
3,335,496	-		AO353_15070	0.34	-0.2
3,335,505	+		AO353_15070	0.38	+1.1
3,335,505	+		AO353_15070	0.38	+0.6
3,335,505	+		AO353_15070	0.38	-2.1
3,335,505	+		AO353_15070	0.38	-0.0
3,335,505	+		AO353_15070	0.38	+1.4
3,335,505	+		AO353_15070	0.38	+0.2
3,335,505	+		AO353_15070	0.38	+0.6
3,335,505	+		AO353_15070	0.38	+2.0
3,335,505	+		AO353_15070	0.38	-1.0
3,335,505	+		AO353_15070	0.38	-0.8
3,335,505	+		AO353_15070	0.38	+0.6
3,335,505	+		AO353_15070	0.38	+2.6
3,335,505	+		AO353_15070	0.38	-1.8
3,335,505	+		AO353_15070	0.38	-1.4
3,335,505	+		AO353_15070	0.38	-1.2
3,335,505	+		AO353_15070	0.38	-1.0
3,335,505	+		AO353_15070	0.38	+0.6
3,335,505	+		AO353_15070	0.38	-1.3
3,335,505	+		AO353_15070	0.38	-1.9
3,335,505	+		AO353_15070	0.38	+0.3
3,335,505	+		AO353_15070	0.38	+0.6
3,335,505	+		AO353_15070	0.38	+0.3
3,335,506	-		AO353_15070	0.38	-1.4
3,335,506	-		AO353_15070	0.38	-0.4
3,335,506	-		AO353_15070	0.38	+0.3
3,335,506	-		AO353_15070	0.38	-0.0
3,335,506	-		AO353_15070	0.38	+0.4
3,335,506	-		AO353_15070	0.38	+2.3
3,335,506	-		AO353_15070	0.38	-1.7
3,335,506	-		AO353_15070	0.38	-1.2
3,335,506	-		AO353_15070	0.38	-1.0
3,335,506	-		AO353_15070	0.38	-0.3
3,335,506	-		AO353_15070	0.38	+0.6
3,335,506	-		AO353_15070	0.38	-2.8
3,335,506	-		AO353_15070	0.38	+0.7
3,335,506	-		AO353_15070	0.38	-0.2
3,335,506	-		AO353_15070	0.38	+1.0
3,335,506	-		AO353_15070	0.38	-1.6
3,335,506	-		AO353_15070	0.38	-1.4
3,335,506	-		AO353_15070	0.38	-1.2
3,335,547	+		AO353_15070	0.54	+1.0
3,335,547	+		AO353_15070	0.54	-0.1
3,335,547	+		AO353_15070	0.54	-1.1
3,335,548	-		AO353_15070	0.54	-2.3
3,335,548	-		AO353_15070	0.54	-0.0
3,335,548	-		AO353_15070	0.54	+1.6
3,335,628	+		AO353_15070	0.85	-0.0
3,335,628	+		AO353_15070	0.85	+0.2
3,335,628	+		AO353_15070	0.85	-0.7
3,335,628	+		AO353_15070	0.85	-0.0
3,335,628	+		AO353_15070	0.85	-0.1
3,335,628	+		AO353_15070	0.85	-0.6
3,335,628	+		AO353_15070	0.85	-0.4
3,335,628	+		AO353_15070	0.85	-0.2
3,335,629	-		AO353_15070	0.85	-0.6
3,335,629	-		AO353_15070	0.85	-1.5
3,335,629	-		AO353_15070	0.85	-0.6
3,335,715	+				-0.4
3,335,715	+				-1.4
3,335,715	+				+0.7
3,335,715	+				-0.4
3,335,715	+				+1.1
3,335,715	+				-0.1
3,335,715	+				-1.4
3,335,715	+				-0.8
3,335,715	+				-0.8
3,335,715	+				-1.6
3,335,715	+				-0.4
3,335,716	-				+0.6
3,335,716	-				-0.9
3,335,716	-				-0.2
3,335,716	-				+1.6
3,335,716	-				-0.0
3,335,716	-				+1.6
3,335,716	-				+0.8
3,335,740	+				-2.1
3,335,740	+				+1.6
3,335,740	+				-2.7
3,335,740	+				-0.4
3,335,741	-				+2.6
3,335,741	-				+1.6
3,335,749	+				-1.4
3,335,749	+				-1.6
3,335,749	+				-1.5
3,335,749	+				+1.6
3,335,749	+				+0.3
3,335,749	+				+2.6
3,335,749	+				+1.6
3,335,749	+				+1.6
3,335,749	+				-1.4
3,335,750	-				+0.6
3,335,750	-				+0.3
3,335,750	-				+1.6
3,335,750	-				+0.4
3,335,750	-				+0.4
3,335,750	-				-1.0
3,335,750	-				+1.0
3,335,750	-				-0.6
3,335,750	-				-0.0
3,335,750	-				-1.2
3,335,804	+				-2.0
3,335,804	+				-0.3
3,335,804	+				-0.4
3,335,804	+				-0.2
3,335,804	+				-1.7
3,335,804	+				+1.2
3,335,834	+				+0.5
3,335,834	+				-0.0
3,335,834	+				-0.6
3,335,834	+				-0.4
3,335,834	+				-0.3
3,335,834	+				+1.0
3,335,834	+				-2.0
3,335,835	-				+0.9
3,335,835	-				-2.1
3,335,835	-				-0.3
3,335,835	-				+0.6
3,335,835	-				-1.1
3,335,835	-				-0.4
3,335,835	-				-1.0
3,335,835	-				+0.4
3,335,835	-				-0.4
3,335,835	-				-0.6
3,335,838	+				-2.3
3,335,838	+				+1.0
3,335,838	+				-0.9
3,335,838	+				-0.8
3,335,838	+				-0.4
3,335,838	+				+0.6
3,335,839	-				-1.4
3,335,839	-				-1.2
3,335,839	-				-0.0
3,335,839	-				-0.4
3,335,839	-				+0.6
3,336,008	+		AO353_15075	0.36	-0.8
3,336,008	+		AO353_15075	0.36	-1.2
3,336,008	+		AO353_15075	0.36	-2.0
3,336,009	-		AO353_15075	0.36	-0.8
3,336,009	-		AO353_15075	0.36	+0.6
3,336,009	-		AO353_15075	0.36	-2.3
3,336,122	+		AO353_15075	0.59	-0.1
3,336,122	+		AO353_15075	0.59	-0.9
3,336,122	+		AO353_15075	0.59	-0.4
3,336,123	-		AO353_15075	0.59	-0.0
3,336,123	-		AO353_15075	0.59	-1.4
3,336,123	-		AO353_15075	0.59	-0.6
3,336,123	-		AO353_15075	0.59	-0.4
3,336,123	-		AO353_15075	0.59	+0.1
3,336,123	-		AO353_15075	0.59	-0.9
3,336,123	-		AO353_15075	0.59	+1.6
3,336,123	-		AO353_15075	0.59	+0.6
3,336,125	-		AO353_15075	0.59	+0.1
3,336,125	-		AO353_15075	0.59	-2.0
3,336,125	-		AO353_15075	0.59	+1.8
3,336,125	-				+0.6
3,336,331	+				-0.6
3,336,331	+				+1.0
3,336,331	+				+0.4
3,336,331	+				+0.8
3,336,331	+				+1.6
3,336,332	-				+0.9
3,336,332	-				-0.6
3,336,332	-				-2.3
3,336,332	-				+0.6
3,336,332	-				+0.2
3,336,476	+		AO353_15080	0.48	-1.0
3,336,476	+		AO353_15080	0.48	-1.0
3,336,476	+		AO353_15080	0.48	-1.5
3,336,476	+		AO353_15080	0.48	+0.9
3,336,476	+		AO353_15080	0.48	+1.6
3,336,476	+		AO353_15080	0.48	-0.4
3,336,477	-		AO353_15080	0.48	+0.1
3,336,477	-		AO353_15080	0.48	-0.8
3,336,477	-		AO353_15080	0.48	-0.8
3,336,477	-		AO353_15080	0.48	-0.6
3,336,477	-		AO353_15080	0.48	-0.4
3,336,477	-		AO353_15080	0.48	-0.2
3,336,553	+		AO353_15080	0.77	+0.6
3,336,553	+		AO353_15080	0.77	-1.4
3,336,553	+		AO353_15080	0.77	-1.0
3,336,553	+		AO353_15080	0.77	+1.6
3,336,553	+		AO353_15080	0.77	+0.7
3,336,553	+		AO353_15080	0.77	+0.2
3,336,553	+		AO353_15080	0.77	+1.0
3,336,553	+		AO353_15080	0.77	+0.2
3,336,553	+		AO353_15080	0.77	-0.3
3,336,553	+		AO353_15080	0.77	-1.3
3,336,553	+		AO353_15080	0.77	+0.6
3,336,553	+		AO353_15080	0.77	-0.2
3,336,554	-		AO353_15080	0.77	-2.1
3,336,554	-		AO353_15080	0.77	-0.8
3,336,554	-		AO353_15080	0.77	+0.6
3,336,554	-		AO353_15080	0.77	-0.0
3,336,554	-		AO353_15080	0.77	+1.1
3,336,554	-		AO353_15080	0.77	-1.2
3,336,554	-		AO353_15080	0.77	+0.6
3,336,554	-		AO353_15080	0.77	+0.6
3,336,554	-		AO353_15080	0.77	+1.6
3,336,554	-		AO353_15080	0.77	+1.6
3,336,555	+		AO353_15080	0.78	-0.0
3,336,555	+		AO353_15080	0.78	+0.8
3,336,555	+		AO353_15080	0.78	-0.4
3,336,555	+		AO353_15080	0.78	+1.6
3,336,555	+		AO353_15080	0.78	+0.8
3,336,555	+		AO353_15080	0.78	+1.6
3,336,555	+		AO353_15080	0.78	+0.6
3,336,555	+		AO353_15080	0.78	+0.2
3,336,555	+		AO353_15080	0.78	-1.0
3,336,555	+		AO353_15080	0.78	-1.4
3,336,555	+		AO353_15080	0.78	+0.6
3,336,555	+		AO353_15080	0.78	-1.2
3,336,555	+		AO353_15080	0.78	+1.9
3,336,555	+		AO353_15080	0.78	+1.3
3,336,555	+		AO353_15080	0.78	-2.1
3,336,555	+		AO353_15080	0.78	+0.6
3,336,555	+		AO353_15080	0.78	-0.8
3,336,555	+		AO353_15080	0.78	+0.6
3,336,555	+		AO353_15080	0.78	-0.4
3,336,555	+		AO353_15080	0.78	-1.0
3,336,556	-		AO353_15080	0.78	+1.1
3,336,556	-		AO353_15080	0.78	+0.6
3,336,556	-		AO353_15080	0.78	-0.2
3,336,556	-		AO353_15080	0.78	+0.1
3,336,556	-		AO353_15080	0.78	+0.2
3,336,556	-		AO353_15080	0.78	-1.1
3,336,556	-		AO353_15080	0.78	-2.1
3,336,556	-		AO353_15080	0.78	-1.5
3,336,556	-		AO353_15080	0.78	-0.2
3,336,556	-		AO353_15080	0.78	-0.3
3,336,556	-		AO353_15080	0.78	+1.0
3,336,556	-		AO353_15080	0.78	-1.0
3,336,556	-		AO353_15080	0.78	-1.8
3,336,556	-		AO353_15080	0.78	+1.3
3,336,559	+		AO353_15080	0.79	+0.6
3,336,559	+		AO353_15080	0.79	+1.8
3,336,559	+		AO353_15080	0.79	+1.9
3,336,559	+		AO353_15080	0.79	-0.3
3,336,559	+		AO353_15080	0.79	-1.4
3,336,559	+		AO353_15080	0.79	+0.8
3,336,559	+		AO353_15080	0.79	-1.7
3,336,559	+		AO353_15080	0.79	-1.0
3,336,559	+		AO353_15080	0.79	-0.3
3,336,559	+		AO353_15080	0.79	-0.8
3,336,559	+		AO353_15080	0.79	-0.6
3,336,559	+		AO353_15080	0.79	-0.0
3,336,559	+		AO353_15080	0.79	-0.0
3,336,559	+		AO353_15080	0.79	-1.9
3,336,559	+		AO353_15080	0.79	+1.6
3,336,559	+		AO353_15080	0.79	-0.0
3,336,559	+		AO353_15080	0.79	-0.3
3,336,559	+		AO353_15080	0.79	+0.8
3,336,559	+		AO353_15080	0.79	-2.3
3,336,559	+		AO353_15080	0.79	+0.9
3,336,559	+		AO353_15080	0.79	-1.3
3,336,559	+		AO353_15080	0.79	-1.2
3,336,559	+		AO353_15080	0.79	+3.6
3,336,559	+		AO353_15080	0.79	+0.2
3,336,559	+		AO353_15080	0.79	-0.0
3,336,559	+		AO353_15080	0.79	+0.1
3,336,559	+		AO353_15080	0.79	+1.0
3,336,559	+		AO353_15080	0.79	+1.0
3,336,559	+		AO353_15080	0.79	-1.0
3,336,559	+		AO353_15080	0.79	+1.0
3,336,559	+		AO353_15080	0.79	-0.0
3,336,559	+		AO353_15080	0.79	-0.0
3,336,560	-		AO353_15080	0.80	-0.0
3,336,560	-		AO353_15080	0.80	+2.0
3,336,560	-		AO353_15080	0.80	-0.4
3,336,560	-		AO353_15080	0.80	+1.6
3,336,560	-		AO353_15080	0.80	-0.4
3,336,560	-		AO353_15080	0.80	-0.4
3,336,560	-		AO353_15080	0.80	+0.8
3,336,560	-		AO353_15080	0.80	-1.4
3,336,560	-		AO353_15080	0.80	-0.0
3,336,560	-		AO353_15080	0.80	-0.4
3,336,560	-		AO353_15080	0.80	+1.1
3,336,560	-		AO353_15080	0.80	-0.9
3,336,560	-		AO353_15080	0.80	-0.8
3,336,560	-		AO353_15080	0.80	-1.4
3,336,560	-		AO353_15080	0.80	-0.4
3,336,560	-		AO353_15080	0.80	+1.6
3,336,560	-		AO353_15080	0.80	-0.0
3,336,560	-		AO353_15080	0.80	-0.0
3,336,560	-		AO353_15080	0.80	-0.0
3,336,560	-		AO353_15080	0.80	+2.6
3,336,560	-		AO353_15080	0.80	-1.2
3,336,560	-				-0.0
3,336,560	-		AO353_15080	0.80	-3.2
3,336,560	-		AO353_15080	0.80	+0.9
3,336,560	-		AO353_15080	0.80	-1.0
3,336,560	-		AO353_15080	0.80	-2.1
3,336,560	-		AO353_15080	0.80	-0.7
3,336,560	-		AO353_15080	0.80	+1.0
3,336,688	+				-1.8
3,336,688	+				-0.7
3,336,688	+				+0.9
3,336,688	+				+1.6
3,336,688	+				-0.4
3,336,688	+				-0.8
3,336,688	+				-0.4
3,336,688	+				+0.2
3,336,688	+				-0.6
3,336,688	+				-0.0
3,336,689	-				-1.6
3,336,689	-				+2.2
3,336,689	-				-0.0
3,336,689	-				+0.6
3,336,689	-				-2.0
3,336,689	-				-0.4
3,336,689	-				-0.6
3,336,689	-				-2.4
3,336,707	+				+0.8
3,336,707	+				-2.0
3,336,707	+				-2.0
3,336,707	+				+0.1
3,336,707	+				-1.9
3,336,707	+				-0.0
3,336,707	+				-0.1
3,336,707	+				+0.6
3,336,707	+				-1.2
3,336,707	+				-0.8
3,336,707	+				+0.4
3,336,707	+				-1.2
3,336,707	+				-1.6
3,336,707	+				-1.4
3,336,707	+				-0.3
3,336,707	+				+0.7
3,336,707	+				+2.6
3,336,707	+				+1.0
3,336,707	+				-0.6
3,336,707	+				-0.9
3,336,707	+				+0.7
3,336,707	+				+0.6
3,336,707	+				-0.0
3,336,707	+				+0.2
3,336,707	+				-0.8
3,336,707	+				+0.6
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