Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12665

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
2,787,350	+		AO353_12660	0.35	+2.0
2,787,350	+		AO353_12660	0.35	-1.0
2,787,634	-		AO353_12660	0.54	+0.5
2,787,690	-		AO353_12660	0.57	+0.5
2,787,704	+		AO353_12660	0.58	-0.5
2,787,704	+		AO353_12660	0.58	+0.1
2,787,705	-		AO353_12660	0.58	-0.9
2,787,705	-		AO353_12660	0.58	-1.8
2,787,705	-		AO353_12660	0.58	+2.5
2,787,775	+		AO353_12660	0.63	-1.2
2,787,775	+		AO353_12660	0.63	+2.5
2,787,875	+		AO353_12660	0.69	-0.5
2,787,875	+		AO353_12660	0.69	-0.8
2,787,876	-		AO353_12660	0.69	+0.5
2,787,876	-		AO353_12660	0.69	+0.7
2,787,876	-		AO353_12660	0.69	-0.8
2,787,876	-		AO353_12660	0.69	-0.8
2,788,088	+		AO353_12660	0.83	-1.0
2,788,089	-		AO353_12660	0.83	-1.5
2,788,089	-		AO353_12660	0.83	-0.8
2,788,089	-		AO353_12660	0.83	+0.5
2,788,089	-		AO353_12660	0.83	+0.5
2,788,089	-		AO353_12660	0.83	-0.8
2,788,170	-		AO353_12660	0.88	+1.5
2,788,170	-		AO353_12660	0.88	+0.5
2,788,236	-				+1.1
2,788,368	+				-0.3
2,788,426	-		AO353_12665	0.10	-1.9
2,788,475	+		AO353_12665	0.15	-1.3
2,789,140	-		AO353_12665	0.85	-1.0
2,789,154	+		AO353_12665	0.87	-0.0
2,789,154	+		AO353_12665	0.87	-2.4
2,789,155	-		AO353_12665	0.87	+0.5
2,789,155	-		AO353_12665	0.87	-0.8
2,789,352	+		AO353_12670	0.10	+0.8
2,789,353	-		AO353_12670	0.11	-0.0
2,789,353	-		AO353_12670	0.11	+0.5
2,789,405	+		AO353_12670	0.18	-0.9
2,789,621	+		AO353_12670	0.47	-0.5
2,789,621	+		AO353_12670	0.47	+0.7
2,789,622	-		AO353_12670	0.47	+0.8
2,789,622	-		AO353_12670	0.47	-0.3
2,789,622	-		AO353_12670	0.47	-0.8
2,789,622	-		AO353_12670	0.47	-1.5
2,789,651	+		AO353_12670	0.51	+1.5
2,789,978	+				-0.7
2,789,978	+				-1.0
2,789,978	+				-0.0
2,789,979	-				-1.3
2,789,979	-				+1.5
2,789,979	-				-0.3
2,790,003	+				+0.2
2,790,004	-				-0.2
2,790,184	+				+0.5
2,790,184	+				-0.8
2,790,184	+				-1.8
2,790,184	+				-0.5
2,790,185	-				-0.0
2,790,185	-				+0.4
2,790,185	-				-2.4
2,790,185	-				-0.5
2,790,191	-				+0.9
2,790,191	-				-1.4
2,790,210	+				+1.0
2,790,210	+				-2.3
2,790,259	+				+0.5
2,790,259	+				-0.3
2,790,260	-				-0.5
2,790,260	-				-1.0
2,790,260	-				-0.9