Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12590

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
2,772,188	+		AO353_12585	0.11	+1.5
2,772,188	+		AO353_12585	0.11	+1.5
2,772,189	-		AO353_12585	0.11	+1.5
2,772,239	+		AO353_12585	0.16	+0.1
2,772,239	+		AO353_12585	0.16	-1.8
2,772,239	+		AO353_12585	0.16	+1.2
2,772,239	+		AO353_12585	0.16	-0.0
2,772,239	+		AO353_12585	0.16	-0.2
2,772,240	-		AO353_12585	0.16	-1.4
2,772,243	+		AO353_12585	0.16	-0.8
2,772,243	+		AO353_12585	0.16	-0.2
2,772,438	+		AO353_12585	0.34	+1.3
2,772,439	-		AO353_12585	0.34	-0.8
2,772,490	+		AO353_12585	0.39	-0.2
2,772,491	-		AO353_12585	0.39	+0.7
2,772,491	-		AO353_12585	0.39	-0.0
2,772,839	-		AO353_12585	0.71	+0.5
2,772,839	-		AO353_12585	0.71	-1.5
2,772,855	+		AO353_12585	0.72	+1.5
2,772,855	+		AO353_12585	0.72	-0.3
2,772,855	+		AO353_12585	0.72	-0.0
2,772,856	-		AO353_12585	0.72	-0.0
2,772,856	-		AO353_12585	0.72	+1.5
2,773,180	+				-2.0
2,773,244	-		AO353_12590	0.18	-0.6
2,773,244	-		AO353_12590	0.18	-1.9
2,773,244	-		AO353_12590	0.18	+0.7
2,773,329	+		AO353_12590	0.37	-0.5
2,773,329	+		AO353_12590	0.37	-1.5
2,773,330	-		AO353_12590	0.37	-1.5
2,773,330	-		AO353_12590	0.37	-1.8
2,773,330	-		AO353_12590	0.37	-0.3
2,773,456	+		AO353_12590	0.64	+3.1
2,773,456	+		AO353_12590	0.64	-0.0
2,773,457	-		AO353_12590	0.64	+0.5
2,773,797	-		AO353_12595	0.13	-1.0
2,773,797	-		AO353_12595	0.13	-1.5
2,773,797	-		AO353_12595	0.13	-1.8
2,773,799	+		AO353_12595	0.13	-1.5
2,773,799	+		AO353_12595	0.13	-2.5
2,773,799	+		AO353_12595	0.13	-1.6
2,773,799	+		AO353_12595	0.13	+1.1
2,773,799	+		AO353_12595	0.13	+0.2
2,773,800	-		AO353_12595	0.13	-0.0
2,773,800	-		AO353_12595	0.13	-1.1
2,773,800	-		AO353_12595	0.13	+1.2
2,773,800	-		AO353_12595	0.13	-1.1
2,773,811	+		AO353_12595	0.14	-0.0
2,773,812	-		AO353_12595	0.14	-1.2
2,773,812	-		AO353_12595	0.14	-1.6
2,773,812	-		AO353_12595	0.14	-0.8
2,774,042	+		AO353_12595	0.32	-0.8
2,774,042	+		AO353_12595	0.32	-0.3
2,774,042	+		AO353_12595	0.32	-0.5
2,774,043	-		AO353_12595	0.32	-1.0
2,774,043	-		AO353_12595	0.32	-1.3
2,774,043	-		AO353_12595	0.32	-0.8
2,774,057	+		AO353_12595	0.33	-1.3
2,774,057	+		AO353_12595	0.33	+0.4
2,774,058	-		AO353_12595	0.33	-0.0
2,774,058	-		AO353_12595	0.33	-0.0
2,774,058	-		AO353_12595	0.33	+0.5
2,774,058	-		AO353_12595	0.33	-0.2
2,774,100	-		AO353_12595	0.36	-2.5
2,774,121	-		AO353_12595	0.38	-2.2
2,774,129	+		AO353_12595	0.39	-0.5
2,774,129	+		AO353_12595	0.39	+0.8
2,774,129	+		AO353_12595	0.39	-0.0
2,774,129	+		AO353_12595	0.39	-1.0
2,774,129	+		AO353_12595	0.39	+0.5
2,774,129	+		AO353_12595	0.39	+0.7
2,774,130	-		AO353_12595	0.39	+0.7
2,774,130	-		AO353_12595	0.39	-0.5
2,774,130	-		AO353_12595	0.39	-1.4
2,774,130	-		AO353_12595	0.39	-0.5
2,774,130	-		AO353_12595	0.39	+0.3
2,774,363	-		AO353_12595	0.57	-0.5
2,774,414	+		AO353_12595	0.61	+1.0
2,774,414	+		AO353_12595	0.61	-0.5
2,774,414	+		AO353_12595	0.61	-1.0
2,774,414	+		AO353_12595	0.61	-0.6
2,774,414	+		AO353_12595	0.61	+0.5
2,774,414	+		AO353_12595	0.61	-1.4
2,774,414	+		AO353_12595	0.61	-1.3
2,774,414	+		AO353_12595	0.61	+1.5
2,774,414	+		AO353_12595	0.61	-0.8
2,774,415	-		AO353_12595	0.61	+0.2
2,774,415	-		AO353_12595	0.61	-1.0
2,774,415	-		AO353_12595	0.61	+0.7
2,774,415	-		AO353_12595	0.61	-0.8
2,774,415	-		AO353_12595	0.61	-0.8
2,774,415	-		AO353_12595	0.61	+0.5
2,774,415	-		AO353_12595	0.61	-2.9
2,774,415	-		AO353_12595	0.61	+0.5
2,774,415	-		AO353_12595	0.61	-0.0
2,774,415	-		AO353_12595	0.61	-3.5
2,774,415	-		AO353_12595	0.61	-1.4
2,774,415	-		AO353_12595	0.61	+1.5
2,774,415	-		AO353_12595	0.61	+1.5
2,774,465	+		AO353_12595	0.65	-0.5
2,774,465	+		AO353_12595	0.65	+1.5
2,774,465	+		AO353_12595	0.65	-1.0
2,774,465	+		AO353_12595	0.65	+0.5
2,774,465	+		AO353_12595	0.65	+0.2
2,774,466	-		AO353_12595	0.65	+0.3
2,774,466	-		AO353_12595	0.65	-2.6
2,774,466	-		AO353_12595	0.65	-1.3
2,774,466	-		AO353_12595	0.65	-1.0
2,774,466	-		AO353_12595	0.65	-0.3
2,774,466	-		AO353_12595	0.65	-1.3
2,774,466	-		AO353_12595	0.65	+1.0
2,774,466	-		AO353_12595	0.65	+1.1
2,774,466	-		AO353_12595	0.65	-0.9
2,774,466	-		AO353_12595	0.65	-1.3
2,774,607	+		AO353_12595	0.76	-2.0
2,774,608	-		AO353_12595	0.76	+0.2
2,774,608	-		AO353_12595	0.76	+1.1