Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10775

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
2,354,698	+		AO353_10765	0.51	-0.5
2,354,699	-		AO353_10765	0.52	+0.1
2,354,700	+		AO353_10765	0.52	+2.5
2,354,700	+		AO353_10765	0.52	+0.9
2,354,700	+		AO353_10765	0.52	-1.3
2,354,700	+		AO353_10765	0.52	-1.0
2,354,700	+		AO353_10765	0.52	-3.6
2,354,700	+		AO353_10765	0.52	-1.9
2,354,700	+		AO353_10765	0.52	-1.1
2,354,700	+		AO353_10765	0.52	+0.1
2,354,700	+		AO353_10765	0.52	-1.1
2,354,701	-		AO353_10765	0.52	+0.5
2,354,701	-		AO353_10765	0.52	-0.6
2,354,701	-		AO353_10765	0.52	-0.5
2,354,701	-		AO353_10765	0.52	-0.7
2,354,701	-		AO353_10765	0.52	-1.9
2,354,701	-		AO353_10765	0.52	-1.3
2,354,701	-		AO353_10765	0.52	+0.5
2,354,701	-		AO353_10765	0.52	-0.6
2,354,701	-		AO353_10765	0.52	-1.3
2,354,701	-		AO353_10765	0.52	-2.0
2,354,701	-		AO353_10765	0.52	+0.5
2,354,701	-		AO353_10765	0.52	-0.9
2,354,770	-		AO353_10765	0.63	-1.1
2,354,799	+		AO353_10765	0.67	+1.7
2,354,841	+		AO353_10765	0.73	-1.3
2,354,841	+		AO353_10765	0.73	-0.7
2,354,841	+		AO353_10765	0.73	-1.3
2,354,841	+		AO353_10765	0.73	-0.3
2,354,842	-		AO353_10765	0.74	-0.9
2,354,842	-		AO353_10765	0.74	-0.7
2,354,993	+				-1.1
2,354,993	+				-1.5
2,354,993	+				-1.2
2,354,993	+				-0.1
2,354,994	-				+0.5
2,354,994	-				-2.1
2,354,994	-				-0.7
2,354,994	-				-0.7
2,354,994	-				-2.2
2,354,994	-				+2.5
2,355,017	+				-1.3
2,355,017	+				-1.3
2,355,017	+				+2.5
2,355,018	-				+1.5
2,355,018	-				-0.1
2,355,018	-				-2.3
2,355,018	-				+1.7
2,355,054	+				-0.3
2,355,055	-				-0.1
2,355,055	-				+0.5
2,355,090	+				-2.2
2,355,090	+				-1.1
2,355,090	+				-0.5
2,355,091	-				+0.5
2,355,091	-				-1.9
2,355,091	-				-1.5
2,355,091	-				+1.9
2,355,091	-				+0.9
2,355,091	-				-0.7
2,355,105	+		AO353_10770	0.12	-2.5
2,355,105	+		AO353_10770	0.12	-0.5
2,355,105	+		AO353_10770	0.12	-1.8
2,355,106	-		AO353_10770	0.12	-0.3
2,355,106	-		AO353_10770	0.12	+1.5
2,355,106	-		AO353_10770	0.12	-2.9
2,355,168	+		AO353_10770	0.23	+0.1
2,355,168	+		AO353_10770	0.23	-0.1
2,355,168	+		AO353_10770	0.23	+1.5
2,355,168	+		AO353_10770	0.23	+0.7
2,355,168	+		AO353_10770	0.23	+1.0
2,355,168	+		AO353_10770	0.23	-0.3
2,355,169	-		AO353_10770	0.23	+0.9
2,355,169	-		AO353_10770	0.23	+0.5
2,355,169	-		AO353_10770	0.23	+0.1
2,355,169	-		AO353_10770	0.23	-0.6
2,355,169	-		AO353_10770	0.23	-1.5
2,355,169	-		AO353_10770	0.23	-1.9
2,355,494	+		AO353_10770	0.83	-1.5
2,355,495	-		AO353_10770	0.83	+0.9
2,355,571	-				+0.9
2,355,571	-				-2.4
2,355,589	+				+1.5
2,355,589	+				+0.8
2,355,590	-				-0.4
2,355,590	-				-0.9
2,355,590	-				-1.0
2,355,611	+				+0.1
2,355,611	+				-1.4
2,355,611	+				+1.9
2,355,611	+				-0.7
2,355,612	-				-0.9
2,355,612	-				-1.1
2,355,633	+				+1.5
2,355,634	-				-0.1
2,355,634	-				-1.4
2,355,634	-				+1.5
2,355,634	-				-1.1
2,355,634	-				-1.1
2,355,634	-				+1.5
2,355,634	-				-0.5
2,355,634	-				-0.4
2,355,634	-				-1.7
2,355,634	-				-0.2
2,355,634	-				-0.9
2,355,634	-				-0.9
2,355,637	+				+0.5
2,355,637	+				-1.1
2,355,637	+				-0.1
2,355,637	+				+2.0
2,355,637	+				-0.5
2,355,637	+				-0.4
2,355,637	+				-2.4
2,355,637	+				+2.7
2,355,637	+				+1.5
2,355,637	+				+3.0
2,355,637	+				+0.0
2,355,638	-				+1.5
2,355,638	-				-0.1
2,355,638	-				-1.2
2,355,638	-				-0.0
2,355,638	-				+0.7
2,355,638	-				-1.9
2,355,638	-				+1.5
2,355,638	-				-0.9
2,355,706	+				-1.5
2,355,746	+				+2.5
2,355,746	+				-0.3
2,355,746	+				-0.4
2,355,747	-				+1.5
2,355,747	-				-1.7
2,355,747	-				-0.9
2,355,747	-				+0.9
2,355,747	-				-1.3
2,355,747	-				+1.5
2,355,747	-				-2.2
2,355,747	-				+2.3
2,355,747	-				+1.5
2,355,825	+				-0.3
2,355,826	-				+2.5
2,355,940	+		AO353_10775	0.13	+0.0
2,355,940	+		AO353_10775	0.13	-0.9
2,355,940	+		AO353_10775	0.13	-0.9
2,355,941	-		AO353_10775	0.13	+0.5
2,355,941	-		AO353_10775	0.13	-1.9
2,355,970	+		AO353_10775	0.14	+0.7
2,356,012	+		AO353_10775	0.16	+0.5
2,356,012	+		AO353_10775	0.16	+0.1
2,356,012	+		AO353_10775	0.16	-0.1
2,356,012	+		AO353_10775	0.16	+2.0
2,356,012	+		AO353_10775	0.16	-1.7
2,356,012	+		AO353_10775	0.16	-0.9
2,356,013	-		AO353_10775	0.16	+1.2
2,356,013	-		AO353_10775	0.16	+2.0
2,356,013	-		AO353_10775	0.16	+0.7
2,356,335	+		AO353_10775	0.32	+0.5
2,356,335	+		AO353_10775	0.32	-0.0
2,356,339	+		AO353_10775	0.32	-0.0
2,356,339	+		AO353_10775	0.32	+0.5
2,356,339	+		AO353_10775	0.32	+0.2
2,356,339	+		AO353_10775	0.32	-2.0
2,356,339	+		AO353_10775	0.32	-1.0
2,356,339	+		AO353_10775	0.32	-1.3
2,356,339	+		AO353_10775	0.32	-1.5
2,356,339	+		AO353_10775	0.32	-0.9
2,356,340	-		AO353_10775	0.32	-0.5
2,356,340	-		AO353_10775	0.32	+1.1
2,356,340	-		AO353_10775	0.32	+2.0
2,356,340	-		AO353_10775	0.32	-0.9
2,356,340	-		AO353_10775	0.32	-0.9
2,356,340	-		AO353_10775	0.32	+0.6
2,356,340	-		AO353_10775	0.32	-0.1
2,356,340	-		AO353_10775	0.32	+0.5
2,356,340	-		AO353_10775	0.32	+0.1
2,356,340	-		AO353_10775	0.32	+0.0
2,356,340	-		AO353_10775	0.32	+3.0
2,356,340	-		AO353_10775	0.32	-0.4
2,356,342	+		AO353_10775	0.32	+2.5
2,356,342	+		AO353_10775	0.32	-1.2
2,356,342	+		AO353_10775	0.32	-2.1
2,356,357	+		AO353_10775	0.33	-0.1
2,356,357	+		AO353_10775	0.33	-0.2
2,356,357	+		AO353_10775	0.33	+0.8
2,356,357	+		AO353_10775	0.33	+1.5
2,356,358	-		AO353_10775	0.33	-1.0
2,356,358	-		AO353_10775	0.33	-0.5
2,356,358	-		AO353_10775	0.33	-2.2
2,356,358	-		AO353_10775	0.33	+0.1
2,356,399	+		AO353_10775	0.35	+1.2
2,356,399	+		AO353_10775	0.35	-1.5
2,356,400	-		AO353_10775	0.35	+1.5
2,356,639	+		AO353_10775	0.47	-1.5
2,356,639	+		AO353_10775	0.47	+2.3
2,356,640	-		AO353_10775	0.47	+0.9
2,356,640	-		AO353_10775	0.47	-2.1
2,356,691	-		AO353_10775	0.49	+0.3
2,356,717	+		AO353_10775	0.51	-0.5
2,356,718	-		AO353_10775	0.51	+1.7
2,356,747	+		AO353_10775	0.52	+0.2
2,356,747	+		AO353_10775	0.52	-1.1
2,356,747	+		AO353_10775	0.52	+0.5
2,356,747	+		AO353_10775	0.52	+1.5
2,356,747	+		AO353_10775	0.52	-1.1
2,356,747	+		AO353_10775	0.52	+0.5
2,356,747	+		AO353_10775	0.52	-0.4
2,356,747	+		AO353_10775	0.52	+1.5
2,356,748	-		AO353_10775	0.52	+1.5
2,356,748	-		AO353_10775	0.52	+2.5
2,356,748	-		AO353_10775	0.52	-0.1
2,356,748	-		AO353_10775	0.52	+1.5
2,356,748	-		AO353_10775	0.52	+1.5
2,356,801	+		AO353_10775	0.55	+0.5
2,356,801	+		AO353_10775	0.55	+0.9
2,356,801	+		AO353_10775	0.55	-1.3
2,356,801	+		AO353_10775	0.55	-1.1
2,356,801	+		AO353_10775	0.55	+0.7
2,356,801	+		AO353_10775	0.55	+0.0
2,356,802	-		AO353_10775	0.55	+1.9
2,356,802	-		AO353_10775	0.55	-2.0
2,356,802	-		AO353_10775	0.55	+0.1
2,356,802	-		AO353_10775	0.55	-1.9
2,356,912	+		AO353_10775	0.60	-0.9
2,356,912	+		AO353_10775	0.60	-1.9
2,356,912	+		AO353_10775	0.60	+0.9
2,356,912	+		AO353_10775	0.60	-0.3
2,356,912	+		AO353_10775	0.60	+2.2
2,356,912	+		AO353_10775	0.60	+2.5
2,356,913	-		AO353_10775	0.60	-0.5
2,356,913	-		AO353_10775	0.60	-1.7
2,356,913	-		AO353_10775	0.60	-0.9
2,356,913	-		AO353_10775	0.60	+1.5
2,356,913	-		AO353_10775	0.60	-0.1
2,356,913	-		AO353_10775	0.60	+0.7
2,356,985	+		AO353_10775	0.64	+3.0
2,356,985	+		AO353_10775	0.64	+0.1
2,356,985	+		AO353_10775	0.64	+0.2
2,356,986	-		AO353_10775	0.64	-0.5
2,356,986	-		AO353_10775	0.64	-0.1
2,356,986	-		AO353_10775	0.64	+0.5
2,356,986	-		AO353_10775	0.64	+1.5
2,356,986	-		AO353_10775	0.64	-1.1
2,356,986	-		AO353_10775	0.64	-0.9
2,356,986	-		AO353_10775	0.64	-0.1
2,356,986	-		AO353_10775	0.64	-2.4
2,356,986	-		AO353_10775	0.64	+0.5
2,357,128	+		AO353_10775	0.71	+0.0
2,357,129	-		AO353_10775	0.71	+1.5
2,357,129	-		AO353_10775	0.71	+1.9
2,357,390	+		AO353_10775	0.84	+0.3
2,357,390	+		AO353_10775	0.84	+0.5
2,357,390	+		AO353_10775	0.84	+3.0
2,357,390	+		AO353_10775	0.84	-2.1
2,357,391	-		AO353_10775	0.84	+0.2
2,357,446	+		AO353_10775	0.86	-0.5
2,357,446	+		AO353_10775	0.86	+1.5
2,357,446	+		AO353_10775	0.86	-3.1
2,357,446	+		AO353_10775	0.86	-1.3
2,357,447	-		AO353_10775	0.86	+2.5
2,357,447	-		AO353_10775	0.86	-0.5
2,357,447	-		AO353_10775	0.86	+0.5
2,357,475	+		AO353_10775	0.88	+0.9
2,357,475	+		AO353_10775	0.88	+0.5
2,357,476	-		AO353_10775	0.88	+0.5
2,357,503	+		AO353_10775	0.89	-0.7
2,357,503	+		AO353_10775	0.89	-1.9
2,357,503	+		AO353_10775	0.89	-1.3
2,357,504	-		AO353_10775	0.89	+2.0
2,357,504	-		AO353_10775	0.89	-0.1
2,357,506	+		AO353_10775	0.89	-1.2
2,357,506	+		AO353_10775	0.89	-0.5
2,357,506	+		AO353_10775	0.89	-1.5
2,357,506	+				-0.1
2,357,506	+		AO353_10775	0.89	-2.1
2,357,506	+		AO353_10775	0.89	-2.0
2,357,506	+		AO353_10775	0.89	+0.2
2,357,506	+		AO353_10775	0.89	-1.1
2,357,506	+		AO353_10775	0.89	-0.1
2,357,506	+		AO353_10775	0.89	-0.1
2,357,506	+		AO353_10775	0.89	-0.4
2,357,506	+		AO353_10775	0.89	-2.5
2,357,506	+		AO353_10775	0.89	+2.5
2,357,506	+		AO353_10775	0.89	+0.5
2,357,506	+		AO353_10775	0.89	+1.5
2,357,506	+		AO353_10775	0.89	+1.0
2,357,506	+		AO353_10775	0.89	-0.5
2,357,506	+		AO353_10775	0.89	-2.1
2,357,507	-		AO353_10775	0.89	+1.5
2,357,507	-		AO353_10775	0.89	+2.0
2,357,507	-		AO353_10775	0.89	+1.5
2,357,507	-		AO353_10775	0.89	-0.3
2,357,507	-		AO353_10775	0.89	-1.0
2,357,507	-		AO353_10775	0.89	+0.5
2,357,507	-		AO353_10775	0.89	-0.9
2,357,507	-		AO353_10775	0.89	+2.5
2,357,512	+		AO353_10775	0.89	-0.1
2,357,512	+		AO353_10775	0.89	+1.5
2,357,512	+		AO353_10775	0.89	-1.1
2,357,512	+		AO353_10775	0.89	-1.3
2,357,512	+		AO353_10775	0.89	+0.0
2,357,512	+		AO353_10775	0.89	-0.5
2,357,512	+		AO353_10775	0.89	+0.5
2,357,512	+		AO353_10775	0.89	+1.5
2,357,512	+		AO353_10775	0.89	+0.5
2,357,512	+		AO353_10775	0.89	+1.5
2,357,512	+		AO353_10775	0.89	-0.5
2,357,512	+		AO353_10775	0.89	+2.8
2,357,512	+		AO353_10775	0.89	-0.5
2,357,513	-		AO353_10775	0.90	-1.1
2,357,513	-		AO353_10775	0.90	-0.8
2,357,513	-		AO353_10775	0.90	+2.3
2,357,513	-		AO353_10775	0.90	-0.1
2,357,513	-		AO353_10775	0.90	+0.9
2,357,513	-		AO353_10775	0.90	-0.5
2,357,513	-		AO353_10775	0.90	-1.1
2,357,513	-		AO353_10775	0.90	+1.5
2,357,921	+		AO353_10780	0.68	+0.9
2,357,921	+		AO353_10780	0.68	+2.0
2,357,922	-		AO353_10780	0.68	+3.5
2,357,922	-		AO353_10780	0.68	+3.5
2,358,064	+				-0.1
2,358,064	+				+1.9
2,358,065	-				+0.6
2,358,065	-				-0.5
2,358,065	-				+1.5
2,358,065	-				-1.7
2,358,068	+				+0.1
2,358,068	+				-1.3
2,358,069	-				-0.8
2,358,069	-				+0.5
2,358,069	-				+1.5
2,358,096	+				-0.9
2,358,096	+				-0.5
2,358,096	+				+0.6
2,358,096	+				+1.5
2,358,096	+				+1.0
2,358,096	+				-0.5
2,358,096	+				+2.5
2,358,096	+				-0.7
2,358,096	+				-1.3
2,358,096	+				-0.1
2,358,096	+				+2.0
2,358,096	+				+0.9
2,358,096	+				+0.0
2,358,096	+				+1.5
2,358,097	-				-1.1
2,358,097	-				+1.2
2,358,097	-				-1.1
2,358,097	-				-1.6
2,358,097	-				+1.5
2,358,097	-				+2.1
2,358,097	-				-0.1
2,358,097	-				-1.3
2,358,097	-				-0.6
2,358,097	-				-0.4
2,358,097	-				-0.1
2,358,097	-				-0.9
2,358,097	-				+0.5
2,358,097	-				-1.1
2,358,097	-				+1.5
2,358,097	-				+1.5
2,358,097	-				-2.3
2,358,097	-				-0.3
2,358,097	-				-0.3
2,358,097	-				-1.2
2,358,097	-				+0.5
2,358,097	-				+0.7
2,358,097	-				+1.5
2,358,283	-		AO353_10785	0.20	-1.7
2,358,283	-		AO353_10785	0.20	+0.5
2,358,368	+		AO353_10785	0.33	-2.8
2,358,368	+		AO353_10785	0.33	-1.3
2,358,368	+		AO353_10785	0.33	+0.5
2,358,368	+		AO353_10785	0.33	-0.5
2,358,368	+		AO353_10785	0.33	-0.5
2,358,368	+		AO353_10785	0.33	+1.0
2,358,369	-		AO353_10785	0.33	-0.3
2,358,369	-		AO353_10785	0.33	+0.9
2,358,369	-		AO353_10785	0.33	-0.3
2,358,369	-		AO353_10785	0.33	-0.5
2,358,369	-		AO353_10785	0.33	-1.9
2,358,369	-		AO353_10785	0.33	-1.5
2,358,382	-		AO353_10785	0.35	-0.3
2,358,382	-		AO353_10785	0.35	-0.3
2,358,461	+		AO353_10785	0.47	-2.1
2,358,461	+		AO353_10785	0.47	+0.4
2,358,461	+		AO353_10785	0.47	-1.3
2,358,461	+		AO353_10785	0.47	+1.5
2,358,461	+		AO353_10785	0.47	+0.7
2,358,462	-		AO353_10785	0.47	+2.5
2,358,513	+		AO353_10785	0.55	+1.5
2,358,513	+		AO353_10785	0.55	+0.5
2,358,514	-		AO353_10785	0.55	+3.5
2,358,514	-		AO353_10785	0.55	+1.5
2,358,514	-		AO353_10785	0.55	+0.7
2,358,514	-		AO353_10785	0.55	-0.5
2,358,514	-		AO353_10785	0.55	+1.5
2,358,648	+		AO353_10785	0.75	+0.0
2,358,649	-		AO353_10785	0.76	+1.5
2,358,669	+		AO353_10785	0.79	-0.1
2,358,669	+		AO353_10785	0.79	+0.2
2,358,679	-		AO353_10785	0.80	-0.0