Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07220

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
1,582,298	+		AO353_07215	0.13	-0.4
1,582,298	+		AO353_07215	0.13	-0.4
1,582,299	-		AO353_07215	0.13	-0.4
1,582,299	-		AO353_07215	0.13	-0.4
1,582,299	-		AO353_07215	0.13	+0.6
1,582,299	-		AO353_07215	0.13	-0.4
1,582,299	-		AO353_07215	0.13	+1.6
1,582,469	+		AO353_07215	0.29	-1.9
1,582,470	-		AO353_07215	0.29	+2.2
1,582,689	+		AO353_07215	0.50	-1.0
1,582,689	+		AO353_07215	0.50	-0.5
1,582,689	+		AO353_07215	0.50	-1.7
1,582,689	+		AO353_07215	0.50	-2.4
1,582,689	+		AO353_07215	0.50	-1.2
1,582,689	+		AO353_07215	0.50	-1.6
1,582,689	+		AO353_07215	0.50	+0.3
1,582,690	-		AO353_07215	0.50	-2.9
1,582,690	-		AO353_07215	0.50	-0.4
1,582,690	-		AO353_07215	0.50	-0.6
1,582,690	-		AO353_07215	0.50	-0.7
1,582,690	-		AO353_07215	0.50	-1.0
1,582,690	-		AO353_07215	0.50	-1.7
1,582,690	-		AO353_07215	0.50	+0.6
1,582,690	-		AO353_07215	0.50	-1.0
1,582,690	-		AO353_07215	0.50	-0.2
1,582,690	-		AO353_07215	0.50	+3.2
1,582,690	-		AO353_07215	0.50	-1.4
1,582,690	-		AO353_07215	0.50	-1.2
1,582,817	+		AO353_07215	0.62	-2.0
1,582,817	+		AO353_07215	0.62	-0.4
1,582,817	+		AO353_07215	0.62	-2.7
1,582,817	+		AO353_07215	0.62	-1.9
1,582,818	-		AO353_07215	0.62	-0.4
1,582,818	-		AO353_07215	0.62	-1.0
1,582,818	-		AO353_07215	0.62	+0.0
1,582,972	+		AO353_07215	0.77	+0.6
1,582,972	+		AO353_07215	0.77	-1.0
1,582,972	+		AO353_07215	0.77	-1.7
1,582,972	+		AO353_07215	0.77	-0.4
1,583,503	-		AO353_07220	0.47	-1.5
1,583,508	+		AO353_07220	0.48	-1.4
1,583,508	+		AO353_07220	0.48	-2.4
1,583,509	-		AO353_07220	0.48	-2.2
1,583,517	+		AO353_07220	0.50	-2.1
1,583,536	+		AO353_07220	0.53	+0.6
1,583,536	+		AO353_07220	0.53	-1.2
1,583,536	+		AO353_07220	0.53	+1.6
1,583,536	+		AO353_07220	0.53	-0.7
1,583,536	+		AO353_07220	0.53	+0.0
1,583,536	+		AO353_07220	0.53	+2.6
1,583,536	+		AO353_07220	0.53	-2.3
1,583,536	+		AO353_07220	0.53	-1.7
1,583,536	+		AO353_07220	0.53	+1.6
1,583,536	+		AO353_07220	0.53	-1.2
1,583,537	-		AO353_07220	0.53	+1.0
1,583,537	-		AO353_07220	0.53	-0.7
1,583,537	-		AO353_07220	0.53	+0.6
1,583,537	-		AO353_07220	0.53	-1.7
1,583,537	-		AO353_07220	0.53	-1.5
1,583,537	-		AO353_07220	0.53	-1.2
1,583,537	-		AO353_07220	0.53	+0.6
1,583,537	-		AO353_07220	0.53	-1.4
1,583,612	+		AO353_07220	0.66	-1.0
1,583,612	+		AO353_07220	0.66	-1.6
1,583,612	+		AO353_07220	0.66	-0.7
1,583,612	+		AO353_07220	0.66	-1.6
1,583,612	+		AO353_07220	0.66	-1.2
1,583,613	-		AO353_07220	0.66	-1.8
1,583,749	+		AO353_07220	0.89	-1.9
1,583,749	+		AO353_07220	0.89	-0.4
1,583,749	+		AO353_07220	0.89	-1.4
1,583,750	-		AO353_07220	0.89	-0.7
1,583,750	-		AO353_07220	0.89	-1.8
1,583,762	+				-3.7
1,583,763	-				+1.6
1,583,763	-				-0.4
1,583,763	-				-1.4
1,583,777	+				-0.4
1,583,777	+				+1.6
1,583,777	+				-0.3
1,583,777	+				-1.0
1,583,777	+				-2.6
1,583,777	+				-1.0
1,583,777	+				-1.6
1,583,777	+				-3.3
1,583,778	-				+1.6
1,583,778	-				-0.7
1,583,781	+				-1.6
1,583,781	+				-1.9
1,583,782	-				-1.6
1,583,782	-				-2.2
1,583,792	+				-2.0
1,583,792	+				-1.7
1,583,792	+				-0.4
1,583,792	+				-0.4
1,583,792	+				-2.2
1,583,792	+				-0.7
1,583,792	+				-1.9
1,583,792	+				-0.7
1,583,793	-				-0.6
1,583,793	-				-2.9
1,583,793	-				-2.5
1,583,793	-				-1.6
1,583,793	-				+0.0
1,583,793	-				-0.7
1,583,793	-				-1.5
1,583,793	-				-1.3
1,583,793	-				-0.7
1,583,797	-				-1.0
1,583,866	+				-0.5
1,583,928	+				-0.6
1,584,067	+				-3.1
1,584,067	+				-2.6
1,584,067	+				-2.1
1,584,067	+				+0.0
1,584,067	+				-1.0
1,584,067	+				-2.0
1,584,068	-				-1.0
1,584,068	-				-0.2
1,584,068	-				-0.4
1,584,068	-				-0.3
1,584,082	+				-0.2
1,584,083	-				-1.1
1,584,083	-				-0.4
1,584,087	+				-3.1
1,584,087	+				-1.3
1,584,087	+				-1.3
1,584,087	+				-1.6
1,584,087	+				-2.3
1,584,087	+				+0.1
1,584,087	+				-0.4
1,584,087	+				+0.2
1,584,087	+				-1.6
1,584,087	+				-1.6
1,584,088	-				-1.9
1,584,088	-				+1.6
1,584,088	-				-0.1
1,584,088	-				-0.7
1,584,088	-				-0.4
1,584,088	-				-2.4
1,584,088	-				-2.1
1,584,088	-				+0.3
1,584,088	-				-1.0
1,584,107	+				+0.4
1,584,108	-				+0.0
1,584,108	-				+0.6
1,584,146	-				-0.9
1,584,146	-				+1.3
1,584,146	-				-0.7
1,584,146	-				+2.0
1,584,146	-				-0.6
1,584,149	+				-2.2
1,584,149	+				-1.7
1,584,149	+				-1.7
1,584,149	+				+0.0
1,584,150	-				-1.4
1,584,150	-				+0.6
1,584,150	-				+1.2
1,584,187	+				-0.7
1,584,187	+				-0.3
1,584,188	-				-2.1
1,584,188	-				+1.6
1,584,195	+				+1.3
1,584,196	-				-1.5
1,584,196	-				+1.6
1,584,196	-				-2.1
1,584,196	-				-1.6
1,584,196	-				-2.1
1,584,196	-				+1.2
1,584,196	-				-0.9
1,584,196	-				-1.7
1,584,200	+				-0.3
1,584,200	+				+2.6
1,584,201	-				-0.2
1,584,299	+				+0.0
1,584,300	-				-0.8
1,584,301	+				+0.9
1,584,302	-				-0.6
1,584,410	+		AO353_07225	0.10	+0.6
1,584,410	+		AO353_07225	0.10	+1.5
1,584,410	+		AO353_07225	0.10	-0.5
1,584,410	+		AO353_07225	0.10	+0.0
1,584,410	+		AO353_07225	0.10	-2.0
1,584,411	-		AO353_07225	0.10	+0.3
1,584,411	-		AO353_07225	0.10	+0.3
1,584,411	-		AO353_07225	0.10	+1.4
1,584,411	-		AO353_07225	0.10	-0.3
1,584,411	-		AO353_07225	0.10	-0.6
1,584,411	-		AO353_07225	0.10	+0.0
1,584,411	-		AO353_07225	0.10	-1.2
1,584,456	+		AO353_07225	0.13	-2.0
1,584,457	-		AO353_07225	0.13	+1.6
1,584,555	+		AO353_07225	0.18	+2.6
1,584,556	-		AO353_07225	0.18	-1.5
1,584,632	+		AO353_07225	0.22	+0.6
1,584,632	+		AO353_07225	0.22	+0.0
1,584,674	+		AO353_07225	0.24	+0.6
1,584,674	+		AO353_07225	0.24	+0.6
1,584,674	+		AO353_07225	0.24	-2.4
1,584,674	+		AO353_07225	0.24	-0.4
1,584,674	+		AO353_07225	0.24	+0.4
1,584,674	+		AO353_07225	0.24	-0.7
1,584,674	+		AO353_07225	0.24	+0.0
1,584,674	+		AO353_07225	0.24	+4.4
1,584,675	-		AO353_07225	0.24	-0.4
1,584,675	-		AO353_07225	0.24	-0.9
1,584,675	-		AO353_07225	0.24	+1.0
1,584,675	-		AO353_07225	0.24	+2.6
1,584,675	-		AO353_07225	0.24	+1.6
1,584,675	-		AO353_07225	0.24	-0.9
1,584,675	-		AO353_07225	0.24	+0.6
1,584,677	+		AO353_07225	0.24	+1.6
1,584,677	+		AO353_07225	0.24	+1.9
1,584,677	+		AO353_07225	0.24	-0.3
1,584,677	+		AO353_07225	0.24	-1.1
1,584,677	+		AO353_07225	0.24	-0.4
1,584,677	+		AO353_07225	0.24	+1.0
1,584,677	+		AO353_07225	0.24	+1.5
1,584,677	+		AO353_07225	0.24	-1.2
1,584,677	+		AO353_07225	0.24	-0.7
1,584,677	+		AO353_07225	0.24	-0.1
1,584,677	+		AO353_07225	0.24	+0.4
1,584,678	-		AO353_07225	0.24	-0.6
1,584,678	-		AO353_07225	0.24	-0.7
1,584,678	-		AO353_07225	0.24	-0.6
1,584,678	-		AO353_07225	0.24	-0.3
1,584,678	-		AO353_07225	0.24	-1.0
1,584,678	-		AO353_07225	0.24	-1.6
1,584,678	-		AO353_07225	0.24	-0.6
1,584,678	-		AO353_07225	0.24	-1.7
1,584,678	-		AO353_07225	0.24	+2.2
1,584,797	+		AO353_07225	0.30	-0.2
1,584,797	+		AO353_07225	0.30	+1.6
1,584,797	+		AO353_07225	0.30	-0.4
1,584,797	+		AO353_07225	0.30	+0.0
1,584,797	+		AO353_07225	0.30	-1.0
1,584,797	+		AO353_07225	0.30	+0.8
1,584,798	-		AO353_07225	0.31	+0.0
1,584,798	-		AO353_07225	0.31	-0.4
1,584,798	-		AO353_07225	0.31	-1.7
1,584,798	-		AO353_07225	0.31	+0.9
1,584,798	-		AO353_07225	0.31	+1.6
1,584,798	-		AO353_07225	0.31	+1.6
1,584,798	-		AO353_07225	0.31	-0.4
1,584,798	-		AO353_07225	0.31	-0.4
1,584,798	-		AO353_07225	0.31	-0.7
1,584,798	-		AO353_07225	0.31	-2.0
1,584,798	-		AO353_07225	0.31	-0.4
1,584,798	-		AO353_07225	0.31	+0.2
1,584,798	-		AO353_07225	0.31	+1.6
1,584,798	-		AO353_07225	0.31	+1.2
1,584,798	-		AO353_07225	0.31	+1.6