Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06355

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
1,417,161	+				-1.4
1,417,162	-				+1.8
1,417,162	-				-0.0
1,417,162	-				-0.6
1,417,245	+				+0.1
1,417,245	+				-1.4
1,417,245	+				+2.3
1,417,246	-				+0.2
1,417,246	-				-0.0
1,417,292	+				+1.6
1,417,292	+				+0.6
1,417,292	+				+1.6
1,417,292	+				-0.2
1,417,293	-				-0.8
1,417,311	+				-2.1
1,417,311	+				-0.2
1,417,311	+				+0.6
1,417,311	+				+0.2
1,417,311	+				-0.6
1,417,311	+				+1.6
1,417,311	+				+0.4
1,417,311	+				-1.0
1,417,311	+				+0.3
1,417,311	+				-0.8
1,417,311	+				-1.2
1,417,311	+				-1.6
1,417,312	-				+1.6
1,417,315	+				+0.2
1,417,315	+				-0.0
1,417,315	+				-0.1
1,417,315	+				-1.9
1,417,315	+				+0.6
1,417,315	+				-0.4
1,417,315	+				+0.6
1,417,315	+				-2.1
1,417,315	+				-1.3
1,417,315	+				-1.9
1,417,316	-				-0.0
1,417,316	-				+1.6
1,417,316	-				+1.6
1,417,316	-				-1.4
1,417,316	-				-1.8
1,417,731	+		AO353_06350	0.53	+0.6
1,417,807	+		AO353_06350	0.63	-0.6
1,417,807	+		AO353_06350	0.63	-1.3
1,417,807	+		AO353_06350	0.63	+1.6
1,417,807	+		AO353_06350	0.63	-0.1
1,417,807	+		AO353_06350	0.63	-0.6
1,417,807	+		AO353_06350	0.63	-1.6
1,417,807	+		AO353_06350	0.63	-0.0
1,417,808	-		AO353_06350	0.63	-1.0
1,417,808	-		AO353_06350	0.63	+1.6
1,417,808	-		AO353_06350	0.63	+0.6
1,417,860	+		AO353_06350	0.69	+0.6
1,417,860	+		AO353_06350	0.69	+1.0
1,417,860	+		AO353_06350	0.69	-1.0
1,417,860	+		AO353_06350	0.69	-0.8
1,417,870	+		AO353_06350	0.71	-2.4
1,417,870	+		AO353_06350	0.71	+0.4
1,417,870	+		AO353_06350	0.71	-2.7
1,417,871	-		AO353_06350	0.71	-0.4
1,417,897	+		AO353_06350	0.74	-0.5
1,417,897	+		AO353_06350	0.74	-1.0
1,417,897	+		AO353_06350	0.74	-0.4
1,417,897	+		AO353_06350	0.74	-1.0
1,417,897	+		AO353_06350	0.74	-0.0
1,417,897	+		AO353_06350	0.74	-1.4
1,417,897	+		AO353_06350	0.74	-0.5
1,417,897	+		AO353_06350	0.74	-0.4
1,417,898	-		AO353_06350	0.74	-0.2
1,417,898	-		AO353_06350	0.74	-1.0
1,417,898	-		AO353_06350	0.74	+0.6
1,417,898	-		AO353_06350	0.74	-0.6
1,417,898	-		AO353_06350	0.74	+0.6
1,417,924	+		AO353_06350	0.77	-0.4
1,417,924	+		AO353_06350	0.77	-2.3
1,417,924	+		AO353_06350	0.77	-0.2
1,417,924	+		AO353_06350	0.77	-2.8
1,417,925	-		AO353_06350	0.78	-1.6
1,417,925	-		AO353_06350	0.78	-1.0
1,417,925	-		AO353_06350	0.78	-1.6
1,417,925	-		AO353_06350	0.78	+1.1
1,417,925	-		AO353_06350	0.78	-0.9
1,418,000	+		AO353_06350	0.87	-1.4
1,418,000	+		AO353_06350	0.87	+0.1
1,418,001	-		AO353_06350	0.87	+0.2
1,418,001	-		AO353_06350	0.87	+1.6
1,418,017	+		AO353_06350	0.89	-0.2
1,418,017	+		AO353_06350	0.89	+0.2
1,418,017	+		AO353_06350	0.89	-1.8
1,418,017	+		AO353_06350	0.89	-2.1
1,418,017	+		AO353_06350	0.89	+0.9
1,418,017	+		AO353_06350	0.89	-0.3
1,418,017	+		AO353_06350	0.89	+2.3
1,418,017	+		AO353_06350	0.89	-0.3
1,418,018	-		AO353_06350	0.89	+1.6
1,418,018	-		AO353_06350	0.89	+1.6
1,418,018	-		AO353_06350	0.89	+1.0
1,418,129	+				-0.8
1,418,129	+				-1.0
1,418,130	-				+0.2
1,418,140	+				+0.7
1,418,185	+		AO353_06355	0.10	-2.1
1,418,185	+		AO353_06355	0.10	-1.8
1,418,185	+		AO353_06355	0.10	-1.4
1,418,299	+		AO353_06355	0.28	+0.6
1,418,299	+		AO353_06355	0.28	-1.2
1,418,299	+		AO353_06355	0.28	-1.4
1,418,360	+		AO353_06355	0.38	+1.6
1,418,361	-		AO353_06355	0.38	+1.6
1,418,488	+		AO353_06355	0.59	+1.0
1,418,488	+		AO353_06355	0.59	-2.0
1,418,489	-		AO353_06355	0.59	+2.6
1,418,743	+				-0.9
1,418,743	+				+0.3
1,418,743	+				+1.1
1,418,743	+				-0.0
1,418,743	+				-1.2
1,418,743	+				-1.2
1,418,743	+				+0.8
1,418,743	+				+0.8
1,418,743	+				+1.3
1,418,744	-				-0.4
1,418,744	-				+0.6
1,418,744	-				+1.6
1,418,744	-				+3.2
1,418,744	-				+1.6
1,418,744	-				-0.0
1,418,747	+				+1.0
1,418,747	+				+0.8
1,418,747	+				+0.1
1,418,747	+				-1.8
1,418,747	+				+1.6
1,418,748	-				+1.6