Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3373

Experiment: Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%
4,348,900	+				-0.1
4,348,980	+		BT3372	0.10	-1.6
4,348,985	-		BT3372	0.11	-1.1
4,349,005	-		BT3372	0.13	-1.6
4,349,038	+		BT3372	0.16	-1.1
4,349,039	-		BT3372	0.17	-5.7
4,349,040	+		BT3372	0.17	-1.1
4,349,041	-		BT3372	0.17	-3.5
4,349,171	+		BT3372	0.30	-3.9
4,349,171	+		BT3372	0.30	-1.6
4,349,171	+		BT3372	0.30	-1.6
4,349,214	-		BT3372	0.34	-0.1
4,349,253	+		BT3372	0.38	-0.1
4,349,359	+		BT3372	0.49	-2.6
4,349,387	+		BT3372	0.52	-1.4
4,349,396	-		BT3372	0.53	-4.1
4,349,454	+		BT3372	0.59	-2.1
4,349,455	-		BT3372	0.59	-1.1
4,349,472	+		BT3372	0.61	-1.1
4,349,474	+		BT3372	0.61	-2.6
4,349,475	-		BT3372	0.61	-1.1
4,349,529	-		BT3372	0.66	-2.1
4,349,561	+		BT3372	0.70	-0.1
4,349,612	-		BT3372	0.75	-2.6
4,349,649	-		BT3372	0.79	-2.1
4,349,658	-		BT3372	0.80	-2.6
4,349,792	-				+0.5
4,349,792	-				-1.4
4,349,794	-				-2.1
4,349,808	+				-2.4
4,349,809	-				-1.1
4,349,828	+				-0.1
4,349,892	-				-0.4
4,349,895	+				-1.1
4,349,936	-		BT3373	0.16	-0.1
4,349,972	-		BT3373	0.24	-2.4
4,350,015	-		BT3373	0.34	-2.1
4,350,022	-		BT3373	0.36	-2.9
4,350,022	-		BT3373	0.36	-2.1
4,350,078	+		BT3373	0.48	-2.6
4,350,078	+		BT3373	0.48	-3.8
4,350,086	-		BT3373	0.50	-1.6
4,350,089	+		BT3373	0.51	-1.9
4,350,089	+		BT3373	0.51	-2.1
4,350,152	-		BT3373	0.65	-1.2
4,350,152	-		BT3373	0.65	-2.4
4,350,157	-		BT3373	0.66	-2.1
4,350,160	-		BT3373	0.67	-2.6
4,350,274	-				-2.1
4,350,274	-				-1.1
4,350,322	+				-1.1
4,350,323	-				-0.6
4,350,330	-				-2.9
4,350,391	+				-3.2
4,350,468	-		BT3374	0.13	-1.3
4,350,504	-		BT3374	0.16	-1.3
4,350,532	+		BT3374	0.19	-2.4
4,350,536	+		BT3374	0.19	-0.1
4,350,537	-		BT3374	0.19	-1.6
4,350,537	-		BT3374	0.19	-0.1
4,350,537	-		BT3374	0.19	-2.1
4,350,537	-		BT3374	0.19	-1.6
4,350,689	+		BT3374	0.32	-2.4
4,350,703	-		BT3374	0.33	-1.1
4,350,782	+		BT3374	0.40	-1.4
4,350,876	+		BT3374	0.48	-0.8
4,350,876	+		BT3374	0.48	-1.1
4,350,877	-		BT3374	0.48	-1.1
4,351,013	+		BT3374	0.59	-1.1
4,351,049	-		BT3374	0.62	-1.1
4,351,104	-		BT3374	0.67	-0.1
4,351,134	+		BT3374	0.69	-0.8
4,351,229	-		BT3374	0.77	-0.1