Experiment: MoLS4 with S-adenosyl Homocysteine 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2863 and DVU2864 are separated by 2 nucleotides DVU2864 and DVU2865 are separated by 16 nucleotides DVU2865 and DVU2866 are separated by 17 nucleotides DVU2866 and DVU2867 are separated by 20 nucleotides DVU2867 and DVU2868 are separated by 2 nucleotides DVU2868 and DVU2869 are separated by 8 nucleotides
DVU2863: DVU2863 - hypothetical protein (TIGR), at 2,961,310 to 2,961,903
DVU2863
DVU2864: DVU2864 - hypothetical protein (TIGR), at 2,961,906 to 2,962,049
DVU2864
DVU2865: DVU2865 - lipoprotein, putative (TIGR), at 2,962,066 to 2,962,476
DVU2865
DVU2866: DVU2866 - conserved hypothetical protein (TIGR), at 2,962,494 to 2,963,042
DVU2866
DVU2867: DVU2867 - holin (TIGR), at 2,963,063 to 2,963,551
DVU2867
DVU2868: DVU2868 - hypothetical protein (TIGR), at 2,963,554 to 2,963,901
DVU2868
DVU2869: DVU2869 - major head protein (TIGR), at 2,963,910 to 2,964,914
DVU2869
Position (kb)
2962
2963
2964 Strain fitness (log2 ratio)
-1
0
1 at 2961.978 kb on + strand, within DVU2864 at 2961.978 kb on + strand, within DVU2864 at 2961.993 kb on + strand, within DVU2864 at 2962.226 kb on + strand, within DVU2865 at 2962.499 kb on - strand at 2962.918 kb on + strand, within DVU2866 at 2962.960 kb on - strand, within DVU2866 at 2962.960 kb on - strand, within DVU2866 at 2962.960 kb on - strand, within DVU2866 at 2963.335 kb on + strand, within DVU2867 at 2963.627 kb on - strand, within DVU2868
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with S-adenosyl Homocysteine 10uM remove 2,961,978 + DVU2864 0.50 +0.0 2,961,978 + DVU2864 0.50 -0.4 2,961,993 + DVU2864 0.60 -0.6 2,962,226 + DVU2865 0.39 -1.0 2,962,499 - -1.4 2,962,918 + DVU2866 0.77 -0.3 2,962,960 - DVU2866 0.85 -1.3 2,962,960 - DVU2866 0.85 -1.1 2,962,960 - DVU2866 0.85 -1.3 2,963,335 + DVU2867 0.56 +1.0 2,963,627 - DVU2868 0.21 +0.8
Or see this region's nucleotide sequence