Experiment: Sucrose (C) and L-Glutamine (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS23440 and PFLU_RS23445 are separated by 76 nucleotides PFLU_RS23445 and PFLU_RS23450 overlap by 4 nucleotides PFLU_RS23450 and PFLU_RS23455 are separated by 71 nucleotides
PFLU_RS23440: PFLU_RS23440 - methyl-accepting chemotaxis protein, at 5,265,240 to 5,266,559
_RS23440
PFLU_RS23445: PFLU_RS23445 - DUF1003 domain-containing protein, at 5,266,636 to 5,267,154
_RS23445
PFLU_RS23450: PFLU_RS23450 - LysR family transcriptional regulator, at 5,267,151 to 5,268,029
_RS23450
PFLU_RS23455: PFLU_RS23455 - CTP synthase, at 5,268,101 to 5,268,811
_RS23455
Position (kb) 5266
5267
5268 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5265.768 kb on + strand, within PFLU_RS23440 at 5265.768 kb on + strand, within PFLU_RS23440 at 5265.769 kb on - strand, within PFLU_RS23440 at 5265.769 kb on - strand, within PFLU_RS23440 at 5265.840 kb on + strand, within PFLU_RS23440 at 5265.840 kb on + strand, within PFLU_RS23440 at 5265.840 kb on + strand, within PFLU_RS23440 at 5265.905 kb on + strand, within PFLU_RS23440 at 5265.939 kb on + strand, within PFLU_RS23440 at 5265.939 kb on + strand, within PFLU_RS23440 at 5265.939 kb on + strand, within PFLU_RS23440 at 5265.939 kb on + strand, within PFLU_RS23440 at 5265.939 kb on + strand, within PFLU_RS23440 at 5265.939 kb on + strand, within PFLU_RS23440 at 5265.939 kb on + strand, within PFLU_RS23440 at 5265.939 kb on + strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.940 kb on - strand, within PFLU_RS23440 at 5265.951 kb on + strand, within PFLU_RS23440 at 5265.951 kb on + strand, within PFLU_RS23440 at 5265.951 kb on + strand, within PFLU_RS23440 at 5265.951 kb on + strand, within PFLU_RS23440 at 5265.952 kb on - strand, within PFLU_RS23440 at 5265.952 kb on - strand, within PFLU_RS23440 at 5265.998 kb on + strand, within PFLU_RS23440 at 5265.998 kb on + strand, within PFLU_RS23440 at 5266.053 kb on + strand, within PFLU_RS23440 at 5266.053 kb on + strand, within PFLU_RS23440 at 5266.053 kb on + strand, within PFLU_RS23440 at 5266.053 kb on + strand, within PFLU_RS23440 at 5266.054 kb on - strand, within PFLU_RS23440 at 5266.475 kb on + strand at 5266.502 kb on + strand at 5266.502 kb on + strand at 5266.502 kb on + strand at 5266.502 kb on + strand at 5266.503 kb on - strand at 5266.503 kb on - strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.594 kb on + strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.595 kb on - strand at 5266.596 kb on + strand at 5266.596 kb on + strand at 5266.596 kb on + strand at 5266.597 kb on - strand at 5266.597 kb on - strand at 5266.597 kb on - strand at 5266.597 kb on - strand at 5266.597 kb on - strand at 5266.611 kb on + strand at 5266.611 kb on + strand at 5266.611 kb on + strand at 5266.611 kb on + strand at 5266.611 kb on + strand at 5266.612 kb on - strand at 5266.612 kb on - strand at 5266.852 kb on + strand, within PFLU_RS23445 at 5266.852 kb on + strand, within PFLU_RS23445 at 5266.853 kb on - strand, within PFLU_RS23445 at 5266.897 kb on + strand, within PFLU_RS23445 at 5266.898 kb on - strand, within PFLU_RS23445 at 5266.898 kb on - strand, within PFLU_RS23445 at 5267.103 kb on + strand at 5267.103 kb on + strand at 5267.103 kb on + strand at 5267.103 kb on + strand at 5267.103 kb on + strand at 5267.104 kb on - strand at 5267.104 kb on - strand at 5267.104 kb on - strand at 5267.104 kb on - strand at 5267.104 kb on - strand at 5267.104 kb on - strand at 5267.104 kb on - strand at 5267.104 kb on - strand at 5267.152 kb on + strand at 5267.152 kb on + strand at 5267.152 kb on + strand at 5267.152 kb on + strand at 5267.152 kb on + strand at 5267.153 kb on - strand at 5267.296 kb on - strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.357 kb on + strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.358 kb on - strand, within PFLU_RS23450 at 5267.371 kb on + strand, within PFLU_RS23450 at 5267.372 kb on - strand, within PFLU_RS23450 at 5267.482 kb on + strand, within PFLU_RS23450 at 5267.585 kb on + strand, within PFLU_RS23450 at 5267.711 kb on + strand, within PFLU_RS23450 at 5267.912 kb on + strand, within PFLU_RS23450 at 5267.913 kb on - strand, within PFLU_RS23450 at 5267.913 kb on - strand, within PFLU_RS23450 at 5267.913 kb on - strand, within PFLU_RS23450 at 5267.913 kb on - strand, within PFLU_RS23450 at 5267.913 kb on - strand, within PFLU_RS23450 at 5267.913 kb on - strand, within PFLU_RS23450 at 5267.995 kb on + strand at 5267.995 kb on + strand at 5267.996 kb on - strand at 5268.008 kb on - strand at 5268.008 kb on - strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.068 kb on + strand at 5268.069 kb on - strand at 5268.069 kb on - strand at 5268.069 kb on - strand at 5268.069 kb on - strand at 5268.069 kb on - strand at 5268.069 kb on - strand at 5268.069 kb on - strand at 5268.069 kb on - strand at 5268.069 kb on - strand at 5268.071 kb on - strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.104 kb on + strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.105 kb on - strand at 5268.149 kb on + strand at 5268.149 kb on + strand at 5268.149 kb on + strand at 5268.149 kb on + strand at 5268.149 kb on + strand at 5268.150 kb on - strand at 5268.150 kb on - strand at 5268.150 kb on - strand at 5268.150 kb on - strand at 5268.150 kb on - strand at 5268.150 kb on - strand at 5268.150 kb on - strand at 5268.150 kb on - strand at 5268.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) and L-Glutamine (N); with MOPS remove 5,265,768 + PFLU_RS23440 0.40 -0.7 5,265,768 + PFLU_RS23440 0.40 +2.1 5,265,769 - PFLU_RS23440 0.40 -0.4 5,265,769 - PFLU_RS23440 0.40 -0.4 5,265,840 + PFLU_RS23440 0.45 +0.2 5,265,840 + PFLU_RS23440 0.45 -1.5 5,265,840 + PFLU_RS23440 0.45 -0.4 5,265,905 + PFLU_RS23440 0.50 -0.3 5,265,939 + PFLU_RS23440 0.53 -0.6 5,265,939 + PFLU_RS23440 0.53 -0.1 5,265,939 + PFLU_RS23440 0.53 +2.1 5,265,939 + PFLU_RS23440 0.53 -0.1 5,265,939 + PFLU_RS23440 0.53 +0.0 5,265,939 + PFLU_RS23440 0.53 +1.7 5,265,939 + PFLU_RS23440 0.53 +0.5 5,265,939 + PFLU_RS23440 0.53 +0.2 5,265,940 - PFLU_RS23440 0.53 -0.7 5,265,940 - PFLU_RS23440 0.53 +0.1 5,265,940 - PFLU_RS23440 0.53 -0.8 5,265,940 - PFLU_RS23440 0.53 +0.6 5,265,940 - PFLU_RS23440 0.53 +0.4 5,265,940 - PFLU_RS23440 0.53 -0.6 5,265,940 - PFLU_RS23440 0.53 -0.9 5,265,940 - PFLU_RS23440 0.53 -0.3 5,265,940 - PFLU_RS23440 0.53 +0.6 5,265,940 - PFLU_RS23440 0.53 -2.5 5,265,940 - PFLU_RS23440 0.53 -0.9 5,265,940 - PFLU_RS23440 0.53 -0.8 5,265,940 - PFLU_RS23440 0.53 +0.1 5,265,940 - PFLU_RS23440 0.53 -1.4 5,265,951 + PFLU_RS23440 0.54 +0.6 5,265,951 + PFLU_RS23440 0.54 -1.5 5,265,951 + PFLU_RS23440 0.54 +0.2 5,265,951 + PFLU_RS23440 0.54 +2.0 5,265,952 - PFLU_RS23440 0.54 -0.4 5,265,952 - PFLU_RS23440 0.54 -0.5 5,265,998 + PFLU_RS23440 0.57 -0.6 5,265,998 + PFLU_RS23440 0.57 -1.1 5,266,053 + PFLU_RS23440 0.62 +1.5 5,266,053 + PFLU_RS23440 0.62 -0.8 5,266,053 + PFLU_RS23440 0.62 -2.0 5,266,053 + PFLU_RS23440 0.62 -0.2 5,266,054 - PFLU_RS23440 0.62 -0.8 5,266,475 + -1.0 5,266,502 + -0.5 5,266,502 + +0.2 5,266,502 + +0.2 5,266,502 + +0.5 5,266,503 - -0.6 5,266,503 - +1.1 5,266,594 + -0.0 5,266,594 + -0.5 5,266,594 + +0.6 5,266,594 + +0.7 5,266,594 + +0.5 5,266,594 + +1.0 5,266,594 + -0.3 5,266,594 + -0.1 5,266,594 + +0.3 5,266,594 + -0.3 5,266,595 - -0.0 5,266,595 - -0.8 5,266,595 - +0.2 5,266,595 - +0.0 5,266,595 - +0.1 5,266,595 - +0.3 5,266,595 - +0.6 5,266,595 - +0.1 5,266,595 - -0.3 5,266,595 - -1.0 5,266,596 + +0.8 5,266,596 + +0.3 5,266,596 + -1.3 5,266,597 - +0.2 5,266,597 - -0.5 5,266,597 - -1.6 5,266,597 - -0.2 5,266,597 - +0.4 5,266,611 + -0.8 5,266,611 + +1.2 5,266,611 + +0.2 5,266,611 + -0.3 5,266,611 + -1.6 5,266,612 - +1.1 5,266,612 - -0.6 5,266,852 + PFLU_RS23445 0.42 -0.8 5,266,852 + PFLU_RS23445 0.42 +0.1 5,266,853 - PFLU_RS23445 0.42 +0.5 5,266,897 + PFLU_RS23445 0.50 -0.1 5,266,898 - PFLU_RS23445 0.50 -1.2 5,266,898 - PFLU_RS23445 0.50 -1.2 5,267,103 + +0.2 5,267,103 + -0.7 5,267,103 + +1.0 5,267,103 + -0.2 5,267,103 + +0.4 5,267,104 - -0.1 5,267,104 - +0.6 5,267,104 - -0.6 5,267,104 - -0.8 5,267,104 - -0.3 5,267,104 - -0.4 5,267,104 - -0.8 5,267,104 - +1.1 5,267,152 + -0.6 5,267,152 + -1.7 5,267,152 + -0.4 5,267,152 + -0.9 5,267,152 + -0.5 5,267,153 - +0.1 5,267,296 - PFLU_RS23450 0.16 -0.8 5,267,357 + PFLU_RS23450 0.23 +0.7 5,267,357 + PFLU_RS23450 0.23 +2.9 5,267,357 + PFLU_RS23450 0.23 -0.4 5,267,357 + PFLU_RS23450 0.23 +0.6 5,267,357 + PFLU_RS23450 0.23 -0.0 5,267,357 + PFLU_RS23450 0.23 -1.5 5,267,357 + PFLU_RS23450 0.23 -0.3 5,267,357 + PFLU_RS23450 0.23 -0.3 5,267,357 + PFLU_RS23450 0.23 +0.1 5,267,357 + PFLU_RS23450 0.23 +0.4 5,267,358 - PFLU_RS23450 0.24 +0.2 5,267,358 - PFLU_RS23450 0.24 +0.9 5,267,358 - PFLU_RS23450 0.24 -1.3 5,267,358 - PFLU_RS23450 0.24 +0.3 5,267,358 - PFLU_RS23450 0.24 -0.4 5,267,358 - PFLU_RS23450 0.24 +0.4 5,267,358 - PFLU_RS23450 0.24 +0.9 5,267,358 - PFLU_RS23450 0.24 +0.2 5,267,358 - PFLU_RS23450 0.24 -0.0 5,267,371 + PFLU_RS23450 0.25 -0.2 5,267,372 - PFLU_RS23450 0.25 -0.7 5,267,482 + PFLU_RS23450 0.38 -0.3 5,267,585 + PFLU_RS23450 0.49 -0.4 5,267,711 + PFLU_RS23450 0.64 -1.8 5,267,912 + PFLU_RS23450 0.87 +0.3 5,267,913 - PFLU_RS23450 0.87 -0.0 5,267,913 - PFLU_RS23450 0.87 -1.6 5,267,913 - PFLU_RS23450 0.87 -1.7 5,267,913 - PFLU_RS23450 0.87 -2.2 5,267,913 - PFLU_RS23450 0.87 -0.5 5,267,913 - PFLU_RS23450 0.87 -1.2 5,267,995 + -0.8 5,267,995 + +0.2 5,267,996 - -0.0 5,268,008 - -0.2 5,268,008 - +0.1 5,268,068 + +0.6 5,268,068 + -0.6 5,268,068 + +0.6 5,268,068 + +0.2 5,268,068 + -0.6 5,268,068 + -0.9 5,268,068 + +0.3 5,268,068 + +0.0 5,268,068 + +0.8 5,268,068 + +0.6 5,268,068 + +0.8 5,268,068 + -0.4 5,268,068 + -2.5 5,268,069 - -0.7 5,268,069 - -1.2 5,268,069 - -0.1 5,268,069 - -0.2 5,268,069 - -0.4 5,268,069 - -1.7 5,268,069 - -0.0 5,268,069 - +0.2 5,268,069 - -0.7 5,268,071 - -0.2 5,268,104 + +1.3 5,268,104 + -0.5 5,268,104 + +0.1 5,268,104 + +0.1 5,268,104 + -0.3 5,268,104 + +0.8 5,268,104 + +2.6 5,268,104 + -0.3 5,268,104 + -0.0 5,268,104 + -0.5 5,268,104 + -0.1 5,268,104 + -0.9 5,268,104 + +0.5 5,268,104 + -1.9 5,268,104 + -1.6 5,268,104 + -0.2 5,268,104 + +0.5 5,268,105 - -0.2 5,268,105 - +1.1 5,268,105 - -0.3 5,268,105 - +0.3 5,268,105 - +2.1 5,268,105 - +0.3 5,268,105 - +1.0 5,268,105 - +0.8 5,268,105 - +0.7 5,268,105 - -0.3 5,268,105 - -0.7 5,268,105 - +0.3 5,268,105 - -0.4 5,268,105 - -0.1 5,268,105 - -0.3 5,268,105 - -1.2 5,268,105 - -1.5 5,268,105 - +0.0 5,268,149 + -0.6 5,268,149 + +0.6 5,268,149 + -0.1 5,268,149 + -1.0 5,268,149 + +0.2 5,268,150 - +1.1 5,268,150 - +0.5 5,268,150 - -0.4 5,268,150 - -0.6 5,268,150 - -0.6 5,268,150 - -1.7 5,268,150 - +0.6 5,268,150 - -0.1 5,268,150 - +0.1
Or see this region's nucleotide sequence