Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22455

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS
5,046,561	+		PFLU_RS22450	0.16	+0.0
5,046,561	+		PFLU_RS22450	0.16	+0.2
5,046,616	+		PFLU_RS22450	0.23	+0.7
5,046,616	+		PFLU_RS22450	0.23	-0.1
5,046,616	+		PFLU_RS22450	0.23	+0.3
5,046,616	+		PFLU_RS22450	0.23	+1.8
5,046,616	+		PFLU_RS22450	0.23	-0.8
5,046,617	-		PFLU_RS22450	0.23	+0.6
5,046,617	-		PFLU_RS22450	0.23	-0.1
5,046,895	+		PFLU_RS22450	0.55	-0.6
5,046,895	+		PFLU_RS22450	0.55	+1.3
5,046,896	-		PFLU_RS22450	0.55	+1.0
5,046,896	-		PFLU_RS22450	0.55	-0.1
5,047,060	+		PFLU_RS22450	0.74	+0.2
5,047,060	+		PFLU_RS22450	0.74	+0.4
5,047,061	-		PFLU_RS22450	0.74	+0.4
5,047,061	-		PFLU_RS22450	0.74	-1.0
5,047,061	-		PFLU_RS22450	0.74	-0.4
5,047,061	-		PFLU_RS22450	0.74	+0.1
5,047,061	-		PFLU_RS22450	0.74	+1.0
5,047,061	-		PFLU_RS22450	0.74	+0.5
5,047,169	-		PFLU_RS22450	0.87	-0.3
5,047,318	-				-1.6
5,047,318	-				+1.1
5,047,338	+				-1.0
5,047,338	+				+1.0
5,047,339	-				+0.4
5,047,339	-				-0.3
5,047,339	-				+0.9
5,047,339	-				+0.4
5,047,339	-				-0.2
5,047,351	-				-1.6
5,047,351	-				+0.2
5,047,400	+				+1.6
5,047,400	+				+0.5
5,047,400	+				+0.5
5,047,400	+				+0.3
5,047,400	+				-0.9
5,047,400	+				-0.2
5,047,401	-				+1.2
5,047,401	-				+0.6
5,047,401	-				+1.1
5,047,401	-				+1.7
5,047,477	+				-0.2
5,047,477	+				-0.5
5,047,478	-				-0.5
5,047,485	+				+0.2
5,047,485	+				+0.1
5,047,485	+				+0.5
5,047,485	+				+0.6
5,047,485	+				+0.9
5,047,486	-				-0.1
5,047,486	-				+0.2
5,047,486	-				+1.4
5,047,486	-				+0.3
5,047,486	-				+0.1
5,047,486	-				+1.1
5,047,641	+		PFLU_RS22455	0.24	-0.8
5,047,641	+		PFLU_RS22455	0.24	-2.6
5,047,641	+		PFLU_RS22455	0.24	+0.9
5,047,641	+		PFLU_RS22455	0.24	-0.6
5,047,641	+		PFLU_RS22455	0.24	-2.6
5,047,641	+		PFLU_RS22455	0.24	+2.4
5,047,641	+		PFLU_RS22455	0.24	-0.3
5,047,641	+		PFLU_RS22455	0.24	-1.2
5,047,641	+		PFLU_RS22455	0.24	-0.5
5,047,641	+		PFLU_RS22455	0.24	-0.6
5,047,641	+		PFLU_RS22455	0.24	-1.0
5,047,641	+		PFLU_RS22455	0.24	+0.2
5,047,642	-		PFLU_RS22455	0.24	-0.4
5,047,642	-		PFLU_RS22455	0.24	-2.4
5,047,642	-		PFLU_RS22455	0.24	-0.4
5,047,642	-		PFLU_RS22455	0.24	-2.3
5,047,642	-		PFLU_RS22455	0.24	-2.5
5,047,642	-		PFLU_RS22455	0.24	-1.0
5,047,642	-		PFLU_RS22455	0.24	-2.0
5,047,642	-		PFLU_RS22455	0.24	-0.4
5,047,683	+		PFLU_RS22455	0.31	-1.2
5,047,683	+		PFLU_RS22455	0.31	-3.1
5,047,683	+		PFLU_RS22455	0.31	-1.4
5,047,683	+		PFLU_RS22455	0.31	+0.7
5,047,683	+		PFLU_RS22455	0.31	-2.5
5,047,683	+		PFLU_RS22455	0.31	-0.7
5,047,683	+		PFLU_RS22455	0.31	-0.4
5,047,683	+		PFLU_RS22455	0.31	-2.6
5,047,683	+		PFLU_RS22455	0.31	-0.6
5,047,683	+		PFLU_RS22455	0.31	-0.9
5,047,683	+		PFLU_RS22455	0.31	-0.8
5,047,684	-		PFLU_RS22455	0.31	+0.2
5,047,684	-		PFLU_RS22455	0.31	-0.9
5,047,684	-		PFLU_RS22455	0.31	-1.6
5,047,684	-		PFLU_RS22455	0.31	+0.5
5,047,857	+		PFLU_RS22455	0.61	-2.7
5,047,905	+		PFLU_RS22455	0.69	-1.4
5,047,905	+		PFLU_RS22455	0.69	-2.0
5,047,905	+		PFLU_RS22455	0.69	-0.6
5,047,906	-		PFLU_RS22455	0.69	-1.2
5,047,906	-		PFLU_RS22455	0.69	-0.3
5,047,906	-		PFLU_RS22455	0.69	-1.1
5,047,906	-		PFLU_RS22455	0.69	+0.2
5,047,906	-		PFLU_RS22455	0.69	+0.8
5,047,950	+		PFLU_RS22455	0.76	+1.2
5,047,951	-		PFLU_RS22455	0.76	+1.2
5,047,951	-		PFLU_RS22455	0.76	-2.3
5,047,951	-		PFLU_RS22455	0.76	-0.2
5,047,951	-		PFLU_RS22455	0.76	-2.0
5,047,953	+		PFLU_RS22455	0.77	+0.2
5,047,954	-		PFLU_RS22455	0.77	+2.2
5,047,954	-		PFLU_RS22455	0.77	-0.6
5,047,954	-		PFLU_RS22455	0.77	-0.9
5,047,954	-		PFLU_RS22455	0.77	-0.4
5,047,954	-		PFLU_RS22455	0.77	+1.6
5,048,001	+		PFLU_RS22455	0.85	-3.4
5,048,001	+		PFLU_RS22455	0.85	-0.6
5,048,001	+		PFLU_RS22455	0.85	-3.5
5,048,002	-		PFLU_RS22455	0.85	-0.5
5,048,002	-		PFLU_RS22455	0.85	-1.9
5,048,002	-		PFLU_RS22455	0.85	-1.3
5,048,002	-		PFLU_RS22455	0.85	-0.3
5,048,002	-		PFLU_RS22455	0.85	-0.6
5,048,046	-				-0.7
5,048,076	-				+1.5
5,048,092	+				-0.7
5,048,092	+				-1.4
5,048,093	-				-0.8
5,048,140	+				-0.4
5,048,140	+				+1.2
5,048,140	+				+0.6
5,048,140	+				+1.2
5,048,140	+				+0.7
5,048,140	+				-0.1
5,048,140	+				+0.1
5,048,140	+				-1.4
5,048,140	+				+0.5
5,048,140	+				+0.3
5,048,140	+				-1.1
5,048,140	+				-0.2
5,048,141	-				+0.6
5,048,141	-				-1.8
5,048,141	-				+0.2
5,048,141	-				-0.2
5,048,141	-				-0.5
5,048,150	-				-1.2
5,048,162	+				-1.6
5,048,162	+				+0.5
5,048,164	+				-0.8
5,048,164	+				-1.1
5,048,164	+				-1.1
5,048,164	+				-0.5
5,048,164	+				-0.0
5,048,164	+				+1.1
5,048,164	+				+0.0
5,048,164	+				-1.8
5,048,164	+				-0.1
5,048,164	+				-0.0
5,048,164	+				+0.2
5,048,164	+				-0.6
5,048,164	+				-0.6
5,048,164	+				-1.0
5,048,164	+				+1.3
5,048,164	+				+0.5
5,048,164	+				-0.4
5,048,164	+				-0.0
5,048,164	+				+0.9
5,048,164	+				+0.4
5,048,164	+				+0.8
5,048,164	+				-0.7
5,048,164	+				+2.1
5,048,164	+				-0.6
5,048,165	-				-1.9
5,048,165	-				+2.9
5,048,165	-				+2.5
5,048,165	-				+1.6
5,048,165	-				-1.1
5,048,165	-				-0.0
5,048,165	-				-0.5
5,048,165	-				-1.6
5,048,165	-				-0.5
5,048,165	-				-0.3
5,048,165	-				+0.9
5,048,165	-				+0.6
5,048,165	-				+0.2
5,048,165	-				+0.5
5,048,168	+				-1.4
5,048,169	-				-0.1
5,048,226	-		PFLU_RS22460	0.13	-0.3
5,048,226	-		PFLU_RS22460	0.13	-0.6
5,048,250	+		PFLU_RS22460	0.15	+0.4
5,048,250	+		PFLU_RS22460	0.15	-0.0
5,048,250	+		PFLU_RS22460	0.15	+0.2
5,048,250	+		PFLU_RS22460	0.15	-0.8
5,048,251	-		PFLU_RS22460	0.15	+0.1
5,048,251	-		PFLU_RS22460	0.15	-1.6
5,048,275	-		PFLU_RS22460	0.18	+0.2
5,048,275	-		PFLU_RS22460	0.18	-1.2
5,048,275	-		PFLU_RS22460	0.18	-0.4
5,048,275	-		PFLU_RS22460	0.18	+0.1
5,048,275	-		PFLU_RS22460	0.18	-0.1
5,048,275	-		PFLU_RS22460	0.18	-0.1
5,048,305	+		PFLU_RS22460	0.20	-1.6
5,048,305	+		PFLU_RS22460	0.20	+0.6
5,048,306	-		PFLU_RS22460	0.21	-0.8
5,048,306	-		PFLU_RS22460	0.21	+0.1
5,048,306	-		PFLU_RS22460	0.21	-0.3
5,048,306	-		PFLU_RS22460	0.21	-0.4
5,048,435	+		PFLU_RS22460	0.33	+0.1
5,048,436	-		PFLU_RS22460	0.33	+0.1
5,048,436	-		PFLU_RS22460	0.33	-0.5
5,048,436	-		PFLU_RS22460	0.33	-0.6
5,048,466	-		PFLU_RS22460	0.36	-0.1
5,048,467	+		PFLU_RS22460	0.36	-0.5
5,048,467	+		PFLU_RS22460	0.36	+0.4
5,048,467	+		PFLU_RS22460	0.36	-0.3
5,048,467	+		PFLU_RS22460	0.36	+1.2
5,048,467	+		PFLU_RS22460	0.36	+1.3
5,048,467	+		PFLU_RS22460	0.36	+0.1
5,048,467	+		PFLU_RS22460	0.36	-0.1
5,048,467	+		PFLU_RS22460	0.36	+1.7
5,048,467	+		PFLU_RS22460	0.36	+0.3
5,048,467	+		PFLU_RS22460	0.36	-1.5
5,048,467	+		PFLU_RS22460	0.36	+0.4
5,048,467	+		PFLU_RS22460	0.36	-1.2
5,048,467	+		PFLU_RS22460	0.36	+0.1
5,048,467	+		PFLU_RS22460	0.36	-0.3
5,048,467	+		PFLU_RS22460	0.36	-0.4
5,048,467	+		PFLU_RS22460	0.36	-0.2
5,048,467	+		PFLU_RS22460	0.36	-0.6
5,048,467	+		PFLU_RS22460	0.36	-1.1
5,048,467	+		PFLU_RS22460	0.36	+0.1
5,048,467	+		PFLU_RS22460	0.36	-0.5
5,048,467	+		PFLU_RS22460	0.36	-1.0
5,048,467	+		PFLU_RS22460	0.36	-0.1
5,048,467	+		PFLU_RS22460	0.36	+0.9
5,048,467	+		PFLU_RS22460	0.36	-0.1
5,048,468	-		PFLU_RS22460	0.36	+0.3
5,048,468	-		PFLU_RS22460	0.36	-0.2
5,048,468	-		PFLU_RS22460	0.36	-0.5
5,048,468	-		PFLU_RS22460	0.36	-0.3
5,048,468	-		PFLU_RS22460	0.36	+0.8
5,048,468	-		PFLU_RS22460	0.36	-1.8
5,048,468	-		PFLU_RS22460	0.36	-0.6
5,048,468	-		PFLU_RS22460	0.36	-0.5
5,048,468	-		PFLU_RS22460	0.36	+1.1
5,048,468	-		PFLU_RS22460	0.36	-1.0
5,048,468	-		PFLU_RS22460	0.36	+1.0
5,048,468	-		PFLU_RS22460	0.36	-0.1
5,048,468	-		PFLU_RS22460	0.36	-0.3
5,048,468	-		PFLU_RS22460	0.36	+0.2
5,048,468	-		PFLU_RS22460	0.36	-0.2
5,048,468	-		PFLU_RS22460	0.36	+0.3
5,048,468	-		PFLU_RS22460	0.36	+0.8
5,048,468	-		PFLU_RS22460	0.36	-2.3
5,048,468	-		PFLU_RS22460	0.36	-0.3
5,048,468	-		PFLU_RS22460	0.36	-1.5
5,048,468	-		PFLU_RS22460	0.36	+0.9
5,048,468	-		PFLU_RS22460	0.36	-0.6
5,048,468	-		PFLU_RS22460	0.36	-0.8
5,048,468	-		PFLU_RS22460	0.36	+0.3
5,048,468	-		PFLU_RS22460	0.36	+1.2
5,048,468	-		PFLU_RS22460	0.36	-0.5
5,048,473	+		PFLU_RS22460	0.36	+0.8
5,048,473	+		PFLU_RS22460	0.36	-2.4
5,048,473	+		PFLU_RS22460	0.36	+0.8
5,048,473	+		PFLU_RS22460	0.36	-1.5
5,048,473	+		PFLU_RS22460	0.36	+0.6
5,048,474	-		PFLU_RS22460	0.37	+0.0
5,048,474	-		PFLU_RS22460	0.37	+0.6
5,048,474	-		PFLU_RS22460	0.37	-2.3
5,048,474	-		PFLU_RS22460	0.37	+0.1
5,048,474	-		PFLU_RS22460	0.37	+0.2
5,048,474	-		PFLU_RS22460	0.37	-0.8
5,048,474	-		PFLU_RS22460	0.37	-1.7
5,048,474	-		PFLU_RS22460	0.37	+0.6
5,048,474	-		PFLU_RS22460	0.37	-0.0
5,048,500	+		PFLU_RS22460	0.39	-0.4
5,048,500	+		PFLU_RS22460	0.39	+0.4
5,048,500	+		PFLU_RS22460	0.39	-1.0
5,048,500	+		PFLU_RS22460	0.39	+5.6
5,048,500	+		PFLU_RS22460	0.39	-0.2
5,048,500	+		PFLU_RS22460	0.39	+1.3
5,048,501	-		PFLU_RS22460	0.39	-0.2
5,048,501	-		PFLU_RS22460	0.39	+0.0
5,048,501	-		PFLU_RS22460	0.39	-0.5
5,048,501	-		PFLU_RS22460	0.39	-0.2
5,048,501	-		PFLU_RS22460	0.39	-0.2
5,048,501	-		PFLU_RS22460	0.39	+0.1
5,048,501	-		PFLU_RS22460	0.39	-1.2
5,048,501	-		PFLU_RS22460	0.39	+0.4
5,048,501	-		PFLU_RS22460	0.39	-0.9
5,048,501	-		PFLU_RS22460	0.39	+0.5
5,048,501	-		PFLU_RS22460	0.39	+0.1
5,048,501	-		PFLU_RS22460	0.39	-0.8
5,048,501	-		PFLU_RS22460	0.39	+0.2
5,048,501	-		PFLU_RS22460	0.39	+0.9
5,048,501	-		PFLU_RS22460	0.39	+1.3
5,048,516	-		PFLU_RS22460	0.41	+0.7
5,048,559	-		PFLU_RS22460	0.45	-2.0
5,048,615	+		PFLU_RS22460	0.50	+0.9
5,048,616	-		PFLU_RS22460	0.50	+0.2
5,048,616	-		PFLU_RS22460	0.50	-0.3
5,048,616	-		PFLU_RS22460	0.50	-2.0
5,048,637	+		PFLU_RS22460	0.52	+0.2
5,048,637	+		PFLU_RS22460	0.52	-0.0
5,048,761	+		PFLU_RS22460	0.64	+0.6
5,048,761	+		PFLU_RS22460	0.64	+0.2
5,048,761	+		PFLU_RS22460	0.64	+0.8
5,048,761	+		PFLU_RS22460	0.64	-1.2
5,048,761	+		PFLU_RS22460	0.64	+0.1
5,048,762	-		PFLU_RS22460	0.64	-0.3
5,048,762	-		PFLU_RS22460	0.64	-0.7
5,048,762	-		PFLU_RS22460	0.64	+0.5
5,048,810	+		PFLU_RS22460	0.69	-0.5
5,048,810	+		PFLU_RS22460	0.69	-0.5
5,048,810	+		PFLU_RS22460	0.69	+0.5
5,048,811	-		PFLU_RS22460	0.69	+0.1
5,048,811	-		PFLU_RS22460	0.69	-1.8
5,048,811	-		PFLU_RS22460	0.69	+1.0
5,048,811	-		PFLU_RS22460	0.69	+0.2
5,048,811	-		PFLU_RS22460	0.69	-1.6
5,048,811	-		PFLU_RS22460	0.69	-1.4
5,048,811	-		PFLU_RS22460	0.69	+0.1
5,048,828	+		PFLU_RS22460	0.70	+1.1
5,048,829	-		PFLU_RS22460	0.70	-0.6
5,048,929	+		PFLU_RS22460	0.80	-0.3
5,048,929	+		PFLU_RS22460	0.80	+1.1
5,048,929	+		PFLU_RS22460	0.80	+0.4
5,048,929	+		PFLU_RS22460	0.80	-0.4
5,048,929	+		PFLU_RS22460	0.80	-1.3
5,048,929	+		PFLU_RS22460	0.80	-1.4
5,048,929	+		PFLU_RS22460	0.80	-0.2
5,048,929	+		PFLU_RS22460	0.80	+0.3
5,048,929	+		PFLU_RS22460	0.80	+0.6
5,048,929	+		PFLU_RS22460	0.80	+0.3
5,048,929	+		PFLU_RS22460	0.80	-1.6
5,048,929	+		PFLU_RS22460	0.80	-1.0
5,048,930	-		PFLU_RS22460	0.80	+0.4
5,048,930	-		PFLU_RS22460	0.80	-0.5
5,048,930	-		PFLU_RS22460	0.80	-0.3
5,048,930	-		PFLU_RS22460	0.80	+1.5
5,048,930	-		PFLU_RS22460	0.80	+1.2
5,048,930	-		PFLU_RS22460	0.80	-0.8
5,048,930	-		PFLU_RS22460	0.80	-0.5
5,048,930	-		PFLU_RS22460	0.80	+0.3
5,048,950	+		PFLU_RS22460	0.82	-0.2
5,048,950	+		PFLU_RS22460	0.82	+0.0
5,049,036	+				-1.1
5,049,036	+				+0.5
5,049,036	+				-1.0
5,049,036	+				-1.6
5,049,036	+				-0.9
5,049,036	+				-1.2
5,049,036	+				+0.7
5,049,036	+				-0.2
5,049,036	+				-0.3
5,049,037	-				-1.4
5,049,037	-				+0.6
5,049,037	-				-0.1
5,049,037	-				+0.2
5,049,037	-				-0.6
5,049,040	+				-0.5
5,049,040	+				-1.1
5,049,040	+				-0.3
5,049,040	+				-0.5
5,049,040	+				+0.7
5,049,040	+				-1.8
5,049,040	+				+0.5
5,049,040	+				+3.7
5,049,040	+				+0.6
5,049,040	+				+1.1
5,049,041	-				-0.0
5,049,041	-				-2.3
5,049,041	-				+0.4
5,049,041	-				+0.9
5,049,041	-				+0.1
5,049,041	-				+0.7
5,049,041	-				-1.3
5,049,071	+				+0.1
5,049,072	-				-1.1
5,049,081	-				-0.1