Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18225

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS
4,133,942	+		PFLU_RS18220	0.37	-2.7
4,133,942	+		PFLU_RS18220	0.37	+0.7
4,133,943	-		PFLU_RS18220	0.37	+1.5
4,133,943	-		PFLU_RS18220	0.37	-0.4
4,133,991	+		PFLU_RS18220	0.42	+0.9
4,133,992	-		PFLU_RS18220	0.42	+0.0
4,134,260	+		PFLU_RS18220	0.69	+0.1
4,134,260	+		PFLU_RS18220	0.69	-0.3
4,134,261	-		PFLU_RS18220	0.69	+0.1
4,134,261	-		PFLU_RS18220	0.69	-0.3
4,134,261	-		PFLU_RS18220	0.69	-1.1
4,134,261	-		PFLU_RS18220	0.69	-0.2
4,134,261	-		PFLU_RS18220	0.69	-1.3
4,134,261	-		PFLU_RS18220	0.69	-0.7
4,134,275	+		PFLU_RS18220	0.70	+0.9
4,134,275	+		PFLU_RS18220	0.70	-0.4
4,134,275	+		PFLU_RS18220	0.70	+0.2
4,134,275	+		PFLU_RS18220	0.70	-0.1
4,134,275	+		PFLU_RS18220	0.70	-0.8
4,134,275	+		PFLU_RS18220	0.70	-0.7
4,134,275	+		PFLU_RS18220	0.70	+0.4
4,134,275	+		PFLU_RS18220	0.70	+0.6
4,134,275	+		PFLU_RS18220	0.70	+0.9
4,134,275	+		PFLU_RS18220	0.70	-0.3
4,134,275	+		PFLU_RS18220	0.70	+0.2
4,134,275	+		PFLU_RS18220	0.70	-0.8
4,134,275	+		PFLU_RS18220	0.70	-2.0
4,134,275	+		PFLU_RS18220	0.70	+0.5
4,134,275	+		PFLU_RS18220	0.70	+0.3
4,134,276	-		PFLU_RS18220	0.70	-1.2
4,134,276	-		PFLU_RS18220	0.70	-0.5
4,134,276	-		PFLU_RS18220	0.70	+0.3
4,134,276	-		PFLU_RS18220	0.70	-0.7
4,134,276	-		PFLU_RS18220	0.70	+1.4
4,134,276	-		PFLU_RS18220	0.70	-0.6
4,134,276	-		PFLU_RS18220	0.70	-0.1
4,134,276	-		PFLU_RS18220	0.70	+0.3
4,134,276	-		PFLU_RS18220	0.70	+0.7
4,134,276	-		PFLU_RS18220	0.70	-0.9
4,134,276	-		PFLU_RS18220	0.70	+0.9
4,134,319	+		PFLU_RS18220	0.74	+0.9
4,134,573	+				+2.1
4,134,574	-				+0.8
4,134,574	-				+0.8
4,134,574	-				-0.6
4,134,617	+				-0.6
4,134,618	-				-1.2
4,134,618	-				-0.0
4,134,618	-				+0.2
4,134,618	-				-0.7
4,134,623	-				-0.4
4,134,733	-				+1.0
4,134,733	-				-1.2
4,134,733	-				-0.3
4,134,756	-		PFLU_RS18225	0.12	-0.8
4,134,756	-		PFLU_RS18225	0.12	-0.2
4,134,939	+		PFLU_RS18225	0.35	+0.5
4,134,939	+		PFLU_RS18225	0.35	-0.4
4,134,940	-		PFLU_RS18225	0.35	-0.5
4,134,940	-		PFLU_RS18225	0.35	-0.4
4,135,047	+		PFLU_RS18225	0.49	-1.0
4,135,048	-		PFLU_RS18225	0.49	-0.9
4,135,164	+		PFLU_RS18225	0.64	-1.3
4,135,165	-		PFLU_RS18225	0.64	-0.1
4,135,165	-		PFLU_RS18225	0.64	+1.3
4,135,374	+				+1.5
4,135,394	+				+1.2
4,135,395	-				+0.6
4,135,395	-				-0.6
4,135,458	+				-0.6
4,135,597	+				+0.5
4,135,597	+				-0.7
4,135,597	+				+0.7
4,135,597	+				+0.1
4,135,597	+				-0.9
4,135,597	+				+0.5
4,135,598	-				-0.6
4,135,598	-				-0.0
4,135,598	-				-0.3
4,135,602	+				-0.6
4,135,633	+				+0.7
4,135,634	-				-0.4
4,135,634	-				-0.5
4,135,634	-				-0.8
4,135,634	-				+0.8
4,135,634	-				-0.2
4,135,659	+				+0.7
4,135,660	-				+0.7
4,135,669	+				-1.1
4,135,669	+				+0.4
4,135,669	+				-0.8
4,135,669	+				+0.3
4,135,670	-				-0.5
4,135,670	-				+0.9
4,135,670	-				-1.8
4,135,670	-				-0.6
4,135,670	-				-0.3
4,135,670	-				+0.0
4,135,670	-				-0.4
4,135,710	-				-0.4
4,135,724	+				-2.6
4,135,724	+				+0.6
4,135,724	+				-1.0
4,135,724	+				-0.3
4,135,724	+				-0.1
4,135,724	+				+1.0
4,135,724	+				-0.8
4,135,725	-				+0.6
4,135,725	-				-0.8
4,135,725	-				-0.0
4,135,725	-				+0.0
4,135,725	-				+0.3
4,135,725	-				-3.0
4,135,725	-				-1.0
4,135,725	-				-0.7
4,135,725	-				+1.1
4,135,725	-				+1.7
4,135,726	+				-0.0
4,135,726	+				+0.4
4,135,726	+				-0.1
4,135,726	+				-0.4
4,135,727	-				-0.6
4,135,727	-				-0.9
4,135,727	-				-0.0
4,135,727	-				-0.9
4,135,727	-				+0.0
4,135,727	-				-0.5
4,135,861	+		PFLU_RS18230	0.19	+0.9
4,135,861	+		PFLU_RS18230	0.19	-0.6
4,135,900	+		PFLU_RS18230	0.22	-0.4
4,135,901	-		PFLU_RS18230	0.22	-2.2
4,135,901	-		PFLU_RS18230	0.22	-0.0
4,135,901	-		PFLU_RS18230	0.22	-0.8
4,135,935	-		PFLU_RS18230	0.25	+0.3
4,135,935	-		PFLU_RS18230	0.25	-1.8
4,135,935	-		PFLU_RS18230	0.25	-0.5
4,136,012	+		PFLU_RS18230	0.31	+0.5
4,136,012	+		PFLU_RS18230	0.31	-0.9
4,136,012	+		PFLU_RS18230	0.31	+0.4
4,136,012	+		PFLU_RS18230	0.31	+0.0
4,136,012	+		PFLU_RS18230	0.31	+0.9
4,136,013	-		PFLU_RS18230	0.31	+0.6
4,136,013	-		PFLU_RS18230	0.31	+2.2
4,136,013	-		PFLU_RS18230	0.31	+0.5
4,136,048	+		PFLU_RS18230	0.34	+0.1
4,136,048	+		PFLU_RS18230	0.34	-0.0
4,136,048	+		PFLU_RS18230	0.34	+0.9
4,136,049	-		PFLU_RS18230	0.34	+0.4
4,136,049	-		PFLU_RS18230	0.34	-0.4
4,136,049	-		PFLU_RS18230	0.34	-0.0
4,136,094	+		PFLU_RS18230	0.37	-0.1
4,136,155	+		PFLU_RS18230	0.42	+0.5
4,136,156	-		PFLU_RS18230	0.42	+0.4
4,136,156	-		PFLU_RS18230	0.42	+0.9
4,136,372	+		PFLU_RS18230	0.59	+0.1
4,136,372	+		PFLU_RS18230	0.59	-0.1
4,136,372	+		PFLU_RS18230	0.59	-0.3
4,136,372	+		PFLU_RS18230	0.59	+0.3
4,136,373	-		PFLU_RS18230	0.60	-0.1
4,136,373	-		PFLU_RS18230	0.60	+1.9
4,136,373	-		PFLU_RS18230	0.60	+0.3
4,136,388	+		PFLU_RS18230	0.61	+1.4
4,136,388	+		PFLU_RS18230	0.61	-0.1
4,136,388	+		PFLU_RS18230	0.61	+1.1
4,136,388	+		PFLU_RS18230	0.61	+0.9
4,136,389	-		PFLU_RS18230	0.61	+1.3
4,136,389	-		PFLU_RS18230	0.61	+0.5
4,136,389	-		PFLU_RS18230	0.61	-0.7
4,136,389	-		PFLU_RS18230	0.61	-0.1
4,136,389	-		PFLU_RS18230	0.61	+0.3
4,136,390	+		PFLU_RS18230	0.61	+1.1
4,136,390	+		PFLU_RS18230	0.61	-1.4
4,136,390	+		PFLU_RS18230	0.61	+0.5
4,136,390	+		PFLU_RS18230	0.61	+0.3
4,136,391	-		PFLU_RS18230	0.61	-0.6
4,136,391	-		PFLU_RS18230	0.61	+0.3
4,136,391	-		PFLU_RS18230	0.61	-0.5