Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12010

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS
2,668,231	+				+0.6
2,668,231	+				-0.2
2,668,232	-				-2.8
2,668,243	+				-1.4
2,668,253	+				-0.3
2,668,254	-				+0.0
2,668,314	+				-2.8
2,668,314	+				-0.6
2,668,314	+				-0.4
2,668,314	+				+0.7
2,668,315	-				-0.1
2,668,315	-				+0.2
2,668,315	-				+0.5
2,668,315	-				+0.9
2,668,315	-				-0.3
2,668,358	+				-1.0
2,668,358	+				+0.6
2,668,358	+				-0.2
2,668,358	+				+1.4
2,668,358	+				-1.7
2,668,362	+				-0.6
2,668,362	+				-1.0
2,668,363	-				+0.2
2,668,363	-				-0.6
2,668,363	-				-0.3
2,668,363	-				-1.9
2,668,372	+				+0.5
2,668,372	+				+1.1
2,668,373	-				-2.2
2,668,429	+				+0.2
2,668,429	+				-0.7
2,668,429	+				-0.9
2,668,430	-				-0.0
2,668,430	-				+0.2
2,668,592	+		PFLU_RS12000	0.49	-0.5
2,668,592	+		PFLU_RS12000	0.49	+0.0
2,668,592	+		PFLU_RS12000	0.49	+0.6
2,668,593	-		PFLU_RS12000	0.50	-0.4
2,668,593	-		PFLU_RS12000	0.50	+0.6
2,668,593	-		PFLU_RS12000	0.50	+0.1
2,668,593	-		PFLU_RS12000	0.50	-0.5
2,668,593	-		PFLU_RS12000	0.50	+0.2
2,668,624	+		PFLU_RS12000	0.58	+0.4
2,668,625	-		PFLU_RS12000	0.58	+0.1
2,668,625	-		PFLU_RS12000	0.58	+1.2
2,668,652	+		PFLU_RS12000	0.66	+0.1
2,668,652	+		PFLU_RS12000	0.66	+0.6
2,668,655	+		PFLU_RS12000	0.67	+0.1
2,668,655	+		PFLU_RS12000	0.67	-1.5
2,668,655	+		PFLU_RS12000	0.67	+1.1
2,668,656	-		PFLU_RS12000	0.67	-0.8
2,668,694	-		PFLU_RS12000	0.77	+0.6
2,668,726	+		PFLU_RS12000	0.86	-0.9
2,668,733	+		PFLU_RS12000	0.88	-0.9
2,668,734	-		PFLU_RS12000	0.88	-0.3
2,668,734	-		PFLU_RS12000	0.88	+1.7
2,668,734	-		PFLU_RS12000	0.88	+0.6
2,668,734	-		PFLU_RS12000	0.88	-0.2
2,668,734	-		PFLU_RS12000	0.88	+0.3
2,668,734	-		PFLU_RS12000	0.88	+0.3
2,668,734	-		PFLU_RS12000	0.88	-0.4
2,668,752	+				-0.2
2,668,753	-				-1.0
2,668,970	+		PFLU_RS12005	0.66	+1.0
2,668,970	+		PFLU_RS12005	0.66	-0.2
2,668,970	+		PFLU_RS12005	0.66	+0.6
2,668,970	+		PFLU_RS12005	0.66	-0.3
2,668,970	+		PFLU_RS12005	0.66	+0.3
2,668,970	+		PFLU_RS12005	0.66	+0.6
2,668,970	+		PFLU_RS12005	0.66	+0.7
2,668,970	+		PFLU_RS12005	0.66	+0.3
2,668,970	+		PFLU_RS12005	0.66	-2.4
2,668,970	+		PFLU_RS12005	0.66	+0.6
2,668,970	+		PFLU_RS12005	0.66	+0.0
2,668,970	+		PFLU_RS12005	0.66	-0.7
2,668,970	+		PFLU_RS12005	0.66	+0.7
2,668,970	+		PFLU_RS12005	0.66	-0.2
2,668,970	+		PFLU_RS12005	0.66	-0.4
2,668,970	+		PFLU_RS12005	0.66	-0.6
2,668,971	-		PFLU_RS12005	0.66	+1.8
2,668,971	-		PFLU_RS12005	0.66	-1.2
2,668,991	+		PFLU_RS12005	0.73	+0.6
2,668,991	+		PFLU_RS12005	0.73	+1.5
2,668,992	-		PFLU_RS12005	0.73	+1.4
2,669,069	+				+0.2
2,669,070	-				-0.4
2,669,182	-				+0.9
2,669,182	-				-0.1
2,669,182	-				+1.5
2,669,273	-		PFLU_RS12010	0.17	-2.1
2,669,355	+		PFLU_RS12010	0.26	+0.3
2,669,376	+		PFLU_RS12010	0.28	-0.5
2,669,376	+		PFLU_RS12010	0.28	-0.0
2,669,377	-		PFLU_RS12010	0.28	-0.6
2,669,377	-		PFLU_RS12010	0.28	-0.9
2,669,790	+		PFLU_RS12010	0.74	-0.6
2,669,790	+		PFLU_RS12010	0.74	-0.3
2,669,791	-		PFLU_RS12010	0.74	-1.0
2,669,824	+		PFLU_RS12010	0.78	-1.5
2,669,844	+		PFLU_RS12010	0.80	-0.3
2,669,845	-		PFLU_RS12010	0.80	-0.3
2,669,845	-		PFLU_RS12010	0.80	+0.3
2,669,845	-		PFLU_RS12010	0.80	-0.4
2,669,845	-		PFLU_RS12010	0.80	-1.7
2,669,872	+		PFLU_RS12010	0.83	-0.3
2,669,872	+		PFLU_RS12010	0.83	+0.3
2,670,193	+				-0.8
2,670,198	+				-0.3
2,670,199	-				-0.1
2,670,199	-				-0.3
2,670,199	-				-0.7
2,670,199	-				-0.3
2,670,263	+				+0.7
2,670,264	-				-1.0
2,670,264	-				+0.4
2,670,264	-				+0.5
2,670,264	-				+0.7
2,670,308	+		PFLU_RS12015	0.12	-0.2
2,670,309	-		PFLU_RS12015	0.12	-2.6
2,670,309	-		PFLU_RS12015	0.12	+0.1
2,670,309	-		PFLU_RS12015	0.12	-0.6
2,670,345	-		PFLU_RS12015	0.14	-0.6
2,670,372	-		PFLU_RS12015	0.16	-0.8
2,670,372	-		PFLU_RS12015	0.16	+0.9
2,670,539	+		PFLU_RS12015	0.24	+0.3
2,670,539	+		PFLU_RS12015	0.24	-0.6
2,670,539	+		PFLU_RS12015	0.24	+0.6
2,670,539	+		PFLU_RS12015	0.24	-0.1
2,670,539	+		PFLU_RS12015	0.24	-0.1
2,670,539	+		PFLU_RS12015	0.24	+0.3
2,670,539	+		PFLU_RS12015	0.24	-0.1
2,670,539	+		PFLU_RS12015	0.24	+0.1
2,670,539	+		PFLU_RS12015	0.24	+0.6
2,670,539	+		PFLU_RS12015	0.24	+0.6
2,670,539	+		PFLU_RS12015	0.24	-0.5
2,670,539	+		PFLU_RS12015	0.24	-2.8
2,670,539	+		PFLU_RS12015	0.24	-0.1
2,670,539	+		PFLU_RS12015	0.24	-1.4
2,670,540	-		PFLU_RS12015	0.24	+1.4
2,670,540	-		PFLU_RS12015	0.24	+0.3
2,670,540	-		PFLU_RS12015	0.24	+0.3
2,670,540	-		PFLU_RS12015	0.24	+0.3
2,670,540	-		PFLU_RS12015	0.24	-1.9
2,670,540	-		PFLU_RS12015	0.24	+0.9
2,670,540	-		PFLU_RS12015	0.24	-0.3
2,670,596	+		PFLU_RS12015	0.27	+1.2
2,670,597	-		PFLU_RS12015	0.27	-0.4
2,670,650	+		PFLU_RS12015	0.30	+1.4
2,670,650	+		PFLU_RS12015	0.30	+0.1
2,670,650	+		PFLU_RS12015	0.30	+0.2
2,670,650	+		PFLU_RS12015	0.30	-1.2
2,670,650	+		PFLU_RS12015	0.30	-0.8
2,670,651	-		PFLU_RS12015	0.30	-0.6
2,670,830	+		PFLU_RS12015	0.40	-1.7
2,670,830	+		PFLU_RS12015	0.40	-2.3
2,670,830	+		PFLU_RS12015	0.40	+1.3
2,670,830	+		PFLU_RS12015	0.40	+0.4
2,670,830	+		PFLU_RS12015	0.40	-0.7
2,670,830	+		PFLU_RS12015	0.40	-0.9
2,670,831	-		PFLU_RS12015	0.40	+1.7
2,670,831	-		PFLU_RS12015	0.40	+1.3
2,670,831	-		PFLU_RS12015	0.40	+0.9
2,670,831	-		PFLU_RS12015	0.40	-0.9
2,670,831	-		PFLU_RS12015	0.40	-0.4
2,670,831	-		PFLU_RS12015	0.40	-0.1
2,670,926	+		PFLU_RS12015	0.45	+0.8
2,670,926	+		PFLU_RS12015	0.45	-1.4
2,670,927	-		PFLU_RS12015	0.45	-1.4
2,670,927	-		PFLU_RS12015	0.45	-1.0
2,670,927	-		PFLU_RS12015	0.45	+1.1
2,670,927	-		PFLU_RS12015	0.45	+0.5
2,670,927	-		PFLU_RS12015	0.45	+0.0
2,670,941	+		PFLU_RS12015	0.45	+0.4
2,670,941	+		PFLU_RS12015	0.45	+0.5
2,670,941	+		PFLU_RS12015	0.45	+0.2
2,670,941	+		PFLU_RS12015	0.45	+1.9
2,670,941	+		PFLU_RS12015	0.45	-0.0
2,670,941	+		PFLU_RS12015	0.45	+0.1
2,670,942	-		PFLU_RS12015	0.45	+0.2
2,670,942	-		PFLU_RS12015	0.45	+0.2
2,670,942	-		PFLU_RS12015	0.45	+0.1
2,670,942	-		PFLU_RS12015	0.45	+1.3
2,670,942	-		PFLU_RS12015	0.45	-0.4
2,670,942	-		PFLU_RS12015	0.45	+0.4
2,670,942	-		PFLU_RS12015	0.45	-0.3
2,670,942	-		PFLU_RS12015	0.45	+0.1