Experiment: Sucrose (C) and L-Glutamine (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS08095 and PFLU_RS08100 are separated by 9 nucleotides PFLU_RS08100 and PFLU_RS08105 overlap by 8 nucleotides
PFLU_RS08095: PFLU_RS08095 - prephenate dehydratase, at 1,805,695 to 1,806,789
_RS08095
PFLU_RS08100: PFLU_RS08100 - histidinol-phosphate transaminase, at 1,806,799 to 1,807,911
_RS08100
PFLU_RS08105: PFLU_RS08105 - bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase, at 1,807,904 to 1,810,150
_RS08105
Position (kb) 1806
1807
1808 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1806.186 kb on + strand, within PFLU_RS08095 at 1806.795 kb on + strand at 1806.853 kb on + strand at 1806.853 kb on + strand at 1806.853 kb on + strand at 1806.853 kb on + strand at 1806.853 kb on + strand at 1807.098 kb on + strand, within PFLU_RS08100 at 1807.098 kb on + strand, within PFLU_RS08100 at 1807.123 kb on + strand, within PFLU_RS08100 at 1807.123 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.396 kb on + strand, within PFLU_RS08100 at 1807.630 kb on + strand, within PFLU_RS08100 at 1807.816 kb on + strand at 1807.816 kb on + strand at 1807.816 kb on + strand at 1807.816 kb on + strand at 1807.839 kb on + strand at 1807.839 kb on + strand at 1807.839 kb on + strand at 1807.939 kb on + strand at 1807.939 kb on + strand at 1807.939 kb on + strand at 1808.458 kb on + strand, within PFLU_RS08105 at 1808.459 kb on - strand, within PFLU_RS08105 at 1808.746 kb on - strand, within PFLU_RS08105 at 1808.813 kb on + strand, within PFLU_RS08105 at 1808.813 kb on + strand, within PFLU_RS08105 at 1808.813 kb on + strand, within PFLU_RS08105 at 1808.813 kb on + strand, within PFLU_RS08105 at 1808.814 kb on - strand, within PFLU_RS08105 at 1808.814 kb on - strand, within PFLU_RS08105 at 1808.814 kb on - strand, within PFLU_RS08105 at 1808.814 kb on - strand, within PFLU_RS08105 at 1808.814 kb on - strand, within PFLU_RS08105 at 1808.814 kb on - strand, within PFLU_RS08105
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) and L-Glutamine (N); with MOPS remove 1,806,186 + PFLU_RS08095 0.45 -0.1 1,806,795 + +0.0 1,806,853 + +1.2 1,806,853 + -0.3 1,806,853 + +0.6 1,806,853 + -0.9 1,806,853 + -2.0 1,807,098 + PFLU_RS08100 0.27 +0.3 1,807,098 + PFLU_RS08100 0.27 -0.8 1,807,123 + PFLU_RS08100 0.29 -1.1 1,807,123 + PFLU_RS08100 0.29 -1.6 1,807,396 + PFLU_RS08100 0.54 -0.9 1,807,396 + PFLU_RS08100 0.54 -0.1 1,807,396 + PFLU_RS08100 0.54 -0.3 1,807,396 + PFLU_RS08100 0.54 -0.4 1,807,396 + PFLU_RS08100 0.54 -0.4 1,807,396 + PFLU_RS08100 0.54 +0.4 1,807,396 + PFLU_RS08100 0.54 -0.3 1,807,396 + PFLU_RS08100 0.54 +0.6 1,807,396 + PFLU_RS08100 0.54 -0.0 1,807,396 + PFLU_RS08100 0.54 +0.9 1,807,396 + PFLU_RS08100 0.54 +0.6 1,807,396 + PFLU_RS08100 0.54 +0.0 1,807,396 + PFLU_RS08100 0.54 +0.4 1,807,396 + PFLU_RS08100 0.54 -0.9 1,807,396 + PFLU_RS08100 0.54 -0.9 1,807,396 + PFLU_RS08100 0.54 -1.2 1,807,396 + PFLU_RS08100 0.54 -1.2 1,807,396 + PFLU_RS08100 0.54 -1.1 1,807,630 + PFLU_RS08100 0.75 -1.8 1,807,816 + -1.6 1,807,816 + -0.9 1,807,816 + +0.0 1,807,816 + +0.4 1,807,839 + +0.9 1,807,839 + -0.6 1,807,839 + +1.4 1,807,939 + -2.0 1,807,939 + -0.4 1,807,939 + +0.4 1,808,458 + PFLU_RS08105 0.25 +2.7 1,808,459 - PFLU_RS08105 0.25 +1.6 1,808,746 - PFLU_RS08105 0.37 +0.5 1,808,813 + PFLU_RS08105 0.40 -1.3 1,808,813 + PFLU_RS08105 0.40 -0.9 1,808,813 + PFLU_RS08105 0.40 +0.6 1,808,813 + PFLU_RS08105 0.40 -1.8 1,808,814 - PFLU_RS08105 0.40 +0.4 1,808,814 - PFLU_RS08105 0.40 +1.9 1,808,814 - PFLU_RS08105 0.40 -0.2 1,808,814 - PFLU_RS08105 0.40 +1.3 1,808,814 - PFLU_RS08105 0.40 +0.9 1,808,814 - PFLU_RS08105 0.40 +0.9
Or see this region's nucleotide sequence