Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS02825

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS
646,378	+				-0.7
646,379	-				+0.1
646,384	+				+0.4
646,384	+				-0.3
646,384	+				+0.5
646,384	+				-0.9
646,384	+				+0.2
646,384	+				-1.7
646,384	+				+0.8
646,384	+				+0.8
646,384	+				-1.8
646,384	+				+0.5
646,384	+				+2.2
646,384	+				+0.4
646,384	+				-0.7
646,384	+				-2.8
646,385	-				+1.0
646,385	-				+0.1
646,385	-				-1.1
646,385	-				+1.0
646,385	-				-1.3
646,385	-				-1.1
646,385	-				+0.0
646,385	-				+0.5
646,410	+				+0.8
646,410	+				+0.6
646,410	+				+1.1
646,410	+				+0.8
646,410	+				+1.5
646,410	+				+0.1
646,410	+				-0.8
646,410	+				-0.9
646,410	+				+0.4
646,410	+				+0.9
646,410	+				-0.5
646,411	-				+0.7
646,411	-				+0.2
646,411	-				+0.8
646,411	-				+0.6
646,426	-				-1.3
646,426	-				-0.2
646,450	+				+0.2
646,450	+				+1.9
646,451	-				+0.8
646,477	+				+0.4
646,477	+				-0.5
646,477	+				-0.5
646,477	+				+0.4
646,477	+				+1.7
646,478	-				-2.1
646,488	+				+0.5
646,488	+				-1.1
646,488	+				+0.7
646,489	-				+0.4
646,489	-				+0.3
646,489	-				-2.7
646,489	-				-0.3
646,489	-				+2.2
646,505	+				-0.8
646,505	+				-2.9
646,505	+				-1.5
646,505	+				-0.1
646,505	+				-0.5
646,505	+				-0.9
646,505	+				-0.5
646,505	+				-0.8
646,505	+				+0.4
646,505	+				+0.2
646,505	+				+1.0
646,505	+				+0.7
646,505	+				+0.3
646,505	+				+0.1
646,505	+				+1.2
646,505	+				+0.5
646,506	-				-1.8
646,506	-				+0.6
646,506	-				+0.1
646,506	-				+1.0
646,506	-				-0.4
646,506	-				+0.1
646,543	+				+0.0
646,543	+				-0.8
646,553	-				-0.4
646,679	-		PFLU_RS02820	0.24	+0.5
646,701	+		PFLU_RS02820	0.27	-1.4
646,717	+		PFLU_RS02820	0.29	+0.8
646,717	+		PFLU_RS02820	0.29	-0.5
646,717	+		PFLU_RS02820	0.29	-0.1
646,717	+		PFLU_RS02820	0.29	+0.5
646,717	+		PFLU_RS02820	0.29	-1.0
646,718	-		PFLU_RS02820	0.29	-1.1
646,718	-		PFLU_RS02820	0.29	-1.2
646,718	-		PFLU_RS02820	0.29	+0.5
646,739	-		PFLU_RS02820	0.32	+2.0
646,739	-		PFLU_RS02820	0.32	-0.8
646,739	-		PFLU_RS02820	0.32	-0.0
646,739	-		PFLU_RS02820	0.32	+0.8
646,739	-		PFLU_RS02820	0.32	-0.2
646,857	+		PFLU_RS02820	0.47	+0.3
646,857	+		PFLU_RS02820	0.47	+1.4
646,858	-		PFLU_RS02820	0.47	+0.4
646,945	+		PFLU_RS02820	0.58	+1.1
647,119	+		PFLU_RS02820	0.80	+0.7
647,185	+		PFLU_RS02820	0.88	-0.1
647,206	-				-0.2
647,263	-				-1.4
647,263	-				+0.6
647,263	-				+0.4
647,283	+				-1.9
647,283	+				+2.0
647,283	+				+0.2
647,284	-				+0.3
647,284	-				+0.6
647,284	-				+1.9
647,284	-				+1.1
647,284	-				+0.3
647,284	-				-1.5
647,284	-				+0.3
647,284	-				-0.2
647,298	-				-1.1
647,332	-				+1.1
647,615	+		PFLU_RS02825	0.88	-0.4
647,616	-		PFLU_RS02825	0.88	-1.8
647,624	+				+0.2
647,624	+				+0.2
647,645	+				-0.9
647,645	+				-0.9
647,645	+				+0.4
647,646	-				+0.1
647,646	-				-0.8
647,646	-				+1.9
647,646	-				-0.2
647,646	-				+0.2
647,654	-				+0.7
647,726	+				-0.2
647,726	+				+1.0
647,726	+				-0.7
647,812	-				-0.5
647,812	-				+0.4
647,857	+				-0.8
647,880	+				-0.1
647,880	+				-1.7
647,880	+				-1.1
647,880	+				-0.9
647,880	+				+0.7
647,880	+				+0.4
647,880	+				+0.2
647,880	+				+0.8
647,880	+				+0.1
647,880	+				+0.5
647,881	-				-0.5
647,881	-				+0.7
647,881	-				+2.4
647,881	-				-0.2
647,881	-				+0.5
647,881	-				+1.4
647,881	-				+0.6
647,923	+				+0.2
647,923	+				-0.2
647,923	+				+0.6
647,923	+				-0.2
647,923	+				+0.7
647,923	+				-0.8
647,923	+				-1.6
647,923	+				-0.3
647,923	+				-0.9
647,923	+				+1.6
647,923	+				-0.5
647,923	+				-0.1
647,923	+				+1.5
647,923	+				+0.2
647,923	+				+0.2
647,923	+				-0.3
647,923	+				+0.6
647,923	+				-0.9
647,923	+				-0.2
647,923	+				+0.8
647,923	+				-0.1
647,923	+				-0.4
647,923	+				+0.7
647,923	+				-0.8
647,923	+				-0.9
647,923	+				+1.0
647,924	-				-0.1
647,924	-				-0.5
647,924	-				+1.3
647,924	-				+1.8
647,924	-				+0.0
647,924	-				+0.3
647,924	-				+0.6
647,924	-				-1.4
647,924	-				+0.2
647,924	-				-0.7
647,924	-				+1.2
647,924	-				-0.3
647,924	-				-0.3
647,924	-				-0.4
647,924	-				+0.5
647,924	-				+0.4
647,924	-				+1.7
647,924	-				+0.8
647,924	-				-0.2
647,924	-				-1.3
647,924	-				+1.2
647,924	-				-0.0
647,924	-				-0.1
648,001	+		PFLU_RS02830	0.12	+1.2
648,001	+		PFLU_RS02830	0.12	+2.2
648,001	+		PFLU_RS02830	0.12	+0.1
648,001	+		PFLU_RS02830	0.12	+1.2
648,002	-		PFLU_RS02830	0.12	-0.6
648,002	-		PFLU_RS02830	0.12	-0.9
648,235	+		PFLU_RS02830	0.35	-2.9
648,235	+		PFLU_RS02830	0.35	-0.9
648,235	+		PFLU_RS02830	0.35	+0.1
648,236	-		PFLU_RS02830	0.35	-2.2
648,236	-		PFLU_RS02830	0.35	-0.7
648,236	-		PFLU_RS02830	0.35	-0.1
648,236	-		PFLU_RS02830	0.35	-0.5
648,236	-		PFLU_RS02830	0.35	-0.7
648,236	-		PFLU_RS02830	0.35	+0.5
648,342	+		PFLU_RS02830	0.45	+0.8
648,342	+		PFLU_RS02830	0.45	+0.5
648,342	+		PFLU_RS02830	0.45	+2.2
648,342	+		PFLU_RS02830	0.45	-0.5
648,342	+		PFLU_RS02830	0.45	-0.2
648,342	+		PFLU_RS02830	0.45	-0.4
648,343	-		PFLU_RS02830	0.46	-0.8
648,343	-		PFLU_RS02830	0.46	-0.4
648,343	-		PFLU_RS02830	0.46	-0.3
648,343	-		PFLU_RS02830	0.46	+0.3
648,524	+		PFLU_RS02830	0.63	+0.6
648,588	-		PFLU_RS02830	0.70	+3.5
648,588	-		PFLU_RS02830	0.70	+0.3