Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00530

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS
108,161	+		PFLU_RS00515	0.88	+1.0
108,162	-		PFLU_RS00515	0.88	-0.1
108,401	+				+0.6
108,401	+				+0.2
108,401	+				-0.0
108,402	-				-1.4
108,402	-				+1.5
108,402	-				+1.0
108,623	+		PFLU_RS00520	0.74	-1.5
108,623	+		PFLU_RS00520	0.74	-2.2
108,624	-		PFLU_RS00520	0.74	+0.0
108,624	-		PFLU_RS00520	0.74	-0.7
108,624	-		PFLU_RS00520	0.74	-0.8
108,624	-		PFLU_RS00520	0.74	-1.2
108,624	-		PFLU_RS00520	0.74	-2.0
108,642	-		PFLU_RS00520	0.79	+1.2
108,702	-				-0.3
108,713	+				+1.0
108,713	+				-1.4
108,714	-				+0.1
108,722	+				-0.0
108,722	+				-0.1
108,723	-				+0.3
108,723	-				-0.8
108,723	-				+0.3
108,791	-		PFLU_RS00525	0.15	-0.4
108,791	-		PFLU_RS00525	0.15	-0.9
108,816	+		PFLU_RS00525	0.23	+0.0
108,816	+		PFLU_RS00525	0.23	+0.3
108,817	-		PFLU_RS00525	0.23	-0.2
108,817	-		PFLU_RS00525	0.23	+0.8
108,817	-		PFLU_RS00525	0.23	-0.3
108,817	-		PFLU_RS00525	0.23	-0.3
108,817	-		PFLU_RS00525	0.23	-1.3
108,868	+		PFLU_RS00525	0.39	+0.9
108,899	+		PFLU_RS00525	0.50	+0.9
108,900	-		PFLU_RS00525	0.50	-0.5
108,945	+		PFLU_RS00525	0.64	+0.7
108,945	+		PFLU_RS00525	0.64	+0.0
108,945	+		PFLU_RS00525	0.64	+0.6
108,945	+		PFLU_RS00525	0.64	+0.2
108,946	-		PFLU_RS00525	0.65	-0.5
108,946	-		PFLU_RS00525	0.65	+0.1
109,028	+				-0.6
109,029	-				-0.1
109,029	-				+0.5
109,031	+				-0.6
109,031	+				+0.3
109,031	+				-1.1
109,031	+				-0.1
109,031	+				-0.4
109,031	+				+0.3
109,032	-				+1.2
109,032	-				+0.8
109,032	-				+0.2
109,032	-				+0.6
109,032	-				+1.3
109,032	-				-0.7
109,087	+				-0.9
109,443	+		PFLU_RS00530	0.89	-2.2
109,443	+		PFLU_RS00530	0.89	-0.3
109,443	+		PFLU_RS00530	0.89	+0.0
109,492	+				-0.2
109,492	+				-0.6
109,492	+				+0.1
109,492	+				+0.4
109,492	+				+0.2
109,492	+				-1.4
109,492	+				-1.4
109,492	+				+0.6
109,492	+				-0.0
109,492	+				+0.5
109,492	+				+1.4
109,492	+				+0.4
109,493	-				-0.8
109,493	-				-0.4
109,493	-				+0.9
109,493	-				-0.3
109,493	-				+1.0
109,493	-				+0.0
109,493	-				+0.3
109,493	-				+1.0
109,493	-				+0.3
109,493	-				-0.5
109,504	+				-1.4
109,543	+				+0.9
109,543	+				-0.2
109,543	+				+0.4
109,543	+				-0.2
109,543	+				-2.6
109,543	+				-0.3
109,543	+				-1.5
109,543	+				-0.2
109,543	+				-0.1
109,543	+				+0.9
109,544	-				-2.0
109,544	-				-0.2
109,544	-				+0.1
109,544	-				+0.1
109,544	-				-0.4
109,544	-				-1.3
109,573	+				+0.1
109,574	-				-0.9
109,576	+				+0.3
109,576	+				+0.3
109,577	-				+0.2
109,577	-				-2.3
109,577	-				+0.7
109,616	+				+0.1
109,616	+				+0.3
109,616	+				-0.5
109,616	+				+1.4
109,617	-				+1.3
109,617	-				+0.3
109,722	-		PFLU_RS30320	0.58	+0.3
109,722	-		PFLU_RS30320	0.58	+0.5
109,722	-		PFLU_RS30320	0.58	-0.5
109,722	-		PFLU_RS30320	0.58	-0.1
109,722	-		PFLU_RS30320	0.58	+0.3
109,740	+		PFLU_RS30320	0.67	-0.2
109,740	+		PFLU_RS30320	0.67	+1.8
109,740	+		PFLU_RS30320	0.67	+0.1
109,740	+		PFLU_RS30320	0.67	+1.1
109,740	+		PFLU_RS30320	0.67	+0.5
109,741	-		PFLU_RS30320	0.68	+1.0
109,741	-		PFLU_RS30320	0.68	+0.7
109,741	-		PFLU_RS30320	0.68	+0.1
109,741	-		PFLU_RS30320	0.68	-1.4
109,776	+		PFLU_RS30320	0.87	-0.2
109,776	+		PFLU_RS30320	0.87	+1.3
109,776	+		PFLU_RS30320	0.87	+1.0
109,776	+		PFLU_RS30320	0.87	+0.3
109,776	+		PFLU_RS30320	0.87	+0.1
109,776	+		PFLU_RS30320	0.87	-0.6
109,776	+		PFLU_RS30320	0.87	-0.9
109,777	-		PFLU_RS30320	0.87	+0.2
109,777	-		PFLU_RS30320	0.87	+0.3
109,778	+		PFLU_RS30320	0.88	-0.2
109,778	+		PFLU_RS30320	0.88	+0.5
109,778	+		PFLU_RS30320	0.88	+1.2
109,778	+		PFLU_RS30320	0.88	-0.3
109,778	+		PFLU_RS30320	0.88	-0.5
109,778	+		PFLU_RS30320	0.88	+0.7
109,778	+		PFLU_RS30320	0.88	-0.2
109,778	+		PFLU_RS30320	0.88	-0.1
109,779	-		PFLU_RS30320	0.88	-0.3
109,779	-		PFLU_RS30320	0.88	-0.5
109,779	-		PFLU_RS30320	0.88	+0.9
109,779	-		PFLU_RS30320	0.88	+0.3
109,779	-		PFLU_RS30320	0.88	-1.5
109,779	-		PFLU_RS30320	0.88	+0.5
109,779	-		PFLU_RS30320	0.88	-1.7
109,779	-		PFLU_RS30320	0.88	-0.3
109,779	-		PFLU_RS30320	0.88	+0.6
109,794	+				+0.8
109,795	-				+0.8
109,795	-				+0.3
109,807	+				-0.7
109,807	+				-1.9
109,864	+				-0.3
109,865	-				+1.0
109,865	-				-0.7
109,882	+				+0.3
109,883	-				+0.3
109,904	-				+0.3
109,904	-				+0.6
109,907	-				+0.9
109,912	+				-0.0
109,941	+				-1.5
109,942	-				-2.2
110,061	-				+0.2
110,095	+		PFLU_RS00535	0.14	+1.9
110,095	+		PFLU_RS00535	0.14	+0.4
110,095	+		PFLU_RS00535	0.14	-1.2
110,233	-		PFLU_RS00535	0.78	+1.6
110,233	-		PFLU_RS00535	0.78	-0.9
110,233	-		PFLU_RS00535	0.78	-0.4
110,270	+				+1.5
110,270	+				-0.5
110,270	+				-0.3
110,270	+				+0.9
110,270	+				+0.4
110,271	-				-0.9
110,271	-				-0.6
110,271	-				+0.3
110,271	-				-0.6
110,271	-				+0.9
110,271	-				+1.4
110,271	-				+0.0
110,308	+				-0.8
110,308	+				-0.4
110,308	+				+0.8
110,308	+				+1.0
110,312	+				-0.5
110,312	+				+0.1
110,313	-				+0.2
110,313	-				+0.5
110,313	-				+0.2
110,313	-				+0.6
110,313	-				-0.3
110,321	-				-0.5
110,321	-				-2.0
110,360	-				+2.1
110,360	-				-0.5
110,360	-				+0.5
110,363	+				-2.2
110,363	+				+0.9
110,364	-				+0.4
110,393	+				+4.4
110,403	+				-0.4
110,437	-				-0.4
110,450	+				+0.7
110,450	+				-0.5
110,451	-				+0.0
110,451	-				+0.4
110,451	-				+0.1
110,451	-				-1.1
110,454	+				+0.1
110,454	+				-0.0
110,455	-				-1.0