Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00520

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS
107,479	+		PFLU_RS00515	0.54	+0.0
107,479	+		PFLU_RS00515	0.54	-1.7
107,479	+		PFLU_RS00515	0.54	+1.1
107,479	+		PFLU_RS00515	0.54	-0.2
107,479	+		PFLU_RS00515	0.54	-0.4
107,479	+		PFLU_RS00515	0.54	-0.9
107,480	-		PFLU_RS00515	0.54	-0.7
107,480	-		PFLU_RS00515	0.54	-0.3
107,480	-		PFLU_RS00515	0.54	+1.6
107,480	-		PFLU_RS00515	0.54	-0.9
107,480	-		PFLU_RS00515	0.54	-0.8
107,518	-		PFLU_RS00515	0.56	+0.6
107,534	+		PFLU_RS00515	0.56	+0.5
107,534	+		PFLU_RS00515	0.56	-1.5
107,534	+		PFLU_RS00515	0.56	-0.1
107,535	-		PFLU_RS00515	0.56	+1.9
107,535	-		PFLU_RS00515	0.56	-0.4
107,615	+		PFLU_RS00515	0.60	+0.4
107,615	+		PFLU_RS00515	0.60	-1.0
107,615	+		PFLU_RS00515	0.60	+0.2
107,615	+		PFLU_RS00515	0.60	+0.9
107,615	+		PFLU_RS00515	0.60	+0.5
107,615	+		PFLU_RS00515	0.60	+0.4
107,615	+		PFLU_RS00515	0.60	-0.3
107,616	-		PFLU_RS00515	0.60	-0.7
107,616	-		PFLU_RS00515	0.60	+0.8
107,616	-		PFLU_RS00515	0.60	+0.5
107,669	+		PFLU_RS00515	0.63	+0.3
107,669	+		PFLU_RS00515	0.63	-1.2
107,669	+		PFLU_RS00515	0.63	+0.7
107,670	-		PFLU_RS00515	0.63	-0.0
107,670	-		PFLU_RS00515	0.63	-2.3
107,672	+		PFLU_RS00515	0.63	+3.0
107,672	+		PFLU_RS00515	0.63	+0.2
107,673	-		PFLU_RS00515	0.63	-1.2
107,673	-		PFLU_RS00515	0.63	-1.5
107,702	+		PFLU_RS00515	0.65	+0.2
107,702	+		PFLU_RS00515	0.65	-1.5
107,702	+		PFLU_RS00515	0.65	+0.4
107,702	+		PFLU_RS00515	0.65	-0.8
107,702	+		PFLU_RS00515	0.65	-0.6
107,703	-		PFLU_RS00515	0.65	-0.0
107,703	-		PFLU_RS00515	0.65	+0.9
107,703	-		PFLU_RS00515	0.65	-0.4
107,703	-		PFLU_RS00515	0.65	+2.1
107,703	-		PFLU_RS00515	0.65	+0.3
107,723	+		PFLU_RS00515	0.66	+0.3
107,723	+		PFLU_RS00515	0.66	-0.3
107,723	+		PFLU_RS00515	0.66	+0.1
107,723	+		PFLU_RS00515	0.66	-0.2
107,723	+		PFLU_RS00515	0.66	+0.9
107,723	+		PFLU_RS00515	0.66	-1.1
107,723	+		PFLU_RS00515	0.66	-0.8
107,723	+		PFLU_RS00515	0.66	-0.6
107,723	+		PFLU_RS00515	0.66	-1.2
107,723	+		PFLU_RS00515	0.66	+0.3
107,723	+		PFLU_RS00515	0.66	+0.5
107,723	+		PFLU_RS00515	0.66	+0.4
107,723	+		PFLU_RS00515	0.66	+0.3
107,724	-		PFLU_RS00515	0.66	-0.0
107,724	-		PFLU_RS00515	0.66	-1.0
107,724	-		PFLU_RS00515	0.66	+1.1
107,724	-		PFLU_RS00515	0.66	-0.3
107,724	-		PFLU_RS00515	0.66	-1.3
107,724	-		PFLU_RS00515	0.66	+1.7
107,724	-		PFLU_RS00515	0.66	-0.4
107,724	-		PFLU_RS00515	0.66	+0.7
107,724	-		PFLU_RS00515	0.66	-1.3
107,768	+		PFLU_RS00515	0.68	-0.2
107,768	+		PFLU_RS00515	0.68	-1.2
107,768	+		PFLU_RS00515	0.68	-1.1
107,768	+		PFLU_RS00515	0.68	-0.4
107,768	+		PFLU_RS00515	0.68	+0.9
107,768	+		PFLU_RS00515	0.68	+0.0
107,768	+		PFLU_RS00515	0.68	-1.3
107,768	+		PFLU_RS00515	0.68	-0.5
107,769	-		PFLU_RS00515	0.68	+0.9
107,769	-		PFLU_RS00515	0.68	-0.9
107,769	-		PFLU_RS00515	0.68	-0.5
107,769	-		PFLU_RS00515	0.68	-0.6
107,769	-		PFLU_RS00515	0.68	+0.7
107,769	-		PFLU_RS00515	0.68	+0.1
107,831	+		PFLU_RS00515	0.71	+0.2
107,831	+		PFLU_RS00515	0.71	+0.2
107,831	+		PFLU_RS00515	0.71	+0.3
107,831	+		PFLU_RS00515	0.71	+0.1
107,831	+		PFLU_RS00515	0.71	+0.7
107,832	-		PFLU_RS00515	0.72	+0.9
107,832	-		PFLU_RS00515	0.72	-0.5
107,832	-		PFLU_RS00515	0.72	+0.6
107,832	-		PFLU_RS00515	0.72	-1.4
107,832	-		PFLU_RS00515	0.72	+0.3
107,832	-		PFLU_RS00515	0.72	-0.1
107,832	-		PFLU_RS00515	0.72	+0.3
107,881	-		PFLU_RS00515	0.74	+0.3
107,881	-		PFLU_RS00515	0.74	-2.1
107,881	-		PFLU_RS00515	0.74	-0.1
108,005	+		PFLU_RS00515	0.80	+0.5
108,005	+		PFLU_RS00515	0.80	-0.2
108,005	+		PFLU_RS00515	0.80	+0.2
108,005	+		PFLU_RS00515	0.80	+0.6
108,005	+		PFLU_RS00515	0.80	-1.0
108,005	+		PFLU_RS00515	0.80	+1.2
108,005	+		PFLU_RS00515	0.80	-0.6
108,005	+		PFLU_RS00515	0.80	+0.1
108,005	+		PFLU_RS00515	0.80	-0.6
108,005	+		PFLU_RS00515	0.80	+0.9
108,005	+		PFLU_RS00515	0.80	-0.6
108,005	+		PFLU_RS00515	0.80	-1.7
108,005	+		PFLU_RS00515	0.80	+0.2
108,005	+		PFLU_RS00515	0.80	-2.5
108,005	+		PFLU_RS00515	0.80	-1.7
108,005	+		PFLU_RS00515	0.80	+0.2
108,005	+		PFLU_RS00515	0.80	-1.3
108,006	-		PFLU_RS00515	0.80	+0.7
108,006	-		PFLU_RS00515	0.80	+0.0
108,006	-		PFLU_RS00515	0.80	-0.8
108,006	-		PFLU_RS00515	0.80	+1.3
108,006	-		PFLU_RS00515	0.80	+0.1
108,006	-		PFLU_RS00515	0.80	+0.4
108,006	-		PFLU_RS00515	0.80	+0.2
108,006	-		PFLU_RS00515	0.80	-0.1
108,006	-		PFLU_RS00515	0.80	-0.7
108,006	-		PFLU_RS00515	0.80	-0.3
108,006	-		PFLU_RS00515	0.80	-0.5
108,006	-		PFLU_RS00515	0.80	+0.3
108,161	+		PFLU_RS00515	0.88	+1.0
108,162	-		PFLU_RS00515	0.88	-0.1
108,401	+				+0.6
108,401	+				+0.2
108,401	+				-0.0
108,402	-				-1.4
108,402	-				+1.5
108,402	-				+1.0
108,623	+		PFLU_RS00520	0.74	-1.5
108,623	+		PFLU_RS00520	0.74	-2.2
108,624	-		PFLU_RS00520	0.74	+0.0
108,624	-		PFLU_RS00520	0.74	-0.7
108,624	-		PFLU_RS00520	0.74	-0.8
108,624	-		PFLU_RS00520	0.74	-1.2
108,624	-		PFLU_RS00520	0.74	-2.0
108,642	-		PFLU_RS00520	0.79	+1.2
108,702	-				-0.3
108,713	+				+1.0
108,713	+				-1.4
108,714	-				+0.1
108,722	+				-0.0
108,722	+				-0.1
108,723	-				+0.3
108,723	-				-0.8
108,723	-				+0.3
108,791	-		PFLU_RS00525	0.15	-0.4
108,791	-		PFLU_RS00525	0.15	-0.9
108,816	+		PFLU_RS00525	0.23	+0.0
108,816	+		PFLU_RS00525	0.23	+0.3
108,817	-		PFLU_RS00525	0.23	-0.2
108,817	-		PFLU_RS00525	0.23	+0.8
108,817	-		PFLU_RS00525	0.23	-0.3
108,817	-		PFLU_RS00525	0.23	-0.3
108,817	-		PFLU_RS00525	0.23	-1.3
108,868	+		PFLU_RS00525	0.39	+0.9
108,899	+		PFLU_RS00525	0.50	+0.9
108,900	-		PFLU_RS00525	0.50	-0.5
108,945	+		PFLU_RS00525	0.64	+0.7
108,945	+		PFLU_RS00525	0.64	+0.0
108,945	+		PFLU_RS00525	0.64	+0.6
108,945	+		PFLU_RS00525	0.64	+0.2
108,946	-		PFLU_RS00525	0.65	-0.5
108,946	-		PFLU_RS00525	0.65	+0.1
109,028	+				-0.6
109,029	-				-0.1
109,029	-				+0.5
109,031	+				-0.6
109,031	+				+0.3
109,031	+				-1.1
109,031	+				-0.1
109,031	+				-0.4
109,031	+				+0.3
109,032	-				+1.2
109,032	-				+0.8
109,032	-				+0.2
109,032	-				+0.6
109,032	-				+1.3
109,032	-				-0.7
109,087	+				-0.9
109,443	+		PFLU_RS00530	0.89	-2.2
109,443	+		PFLU_RS00530	0.89	-0.3
109,443	+		PFLU_RS00530	0.89	+0.0
109,492	+				-0.2
109,492	+				-0.6
109,492	+				+0.1
109,492	+				+0.4
109,492	+				+0.2
109,492	+				-1.4
109,492	+				-1.4
109,492	+				+0.6
109,492	+				-0.0
109,492	+				+0.5
109,492	+				+1.4
109,492	+				+0.4
109,493	-				-0.8
109,493	-				-0.4
109,493	-				+0.9
109,493	-				-0.3
109,493	-				+1.0
109,493	-				+0.0
109,493	-				+0.3
109,493	-				+1.0
109,493	-				+0.3
109,493	-				-0.5
109,504	+				-1.4
109,543	+				+0.9
109,543	+				-0.2
109,543	+				+0.4
109,543	+				-0.2
109,543	+				-2.6
109,543	+				-0.3
109,543	+				-1.5
109,543	+				-0.2
109,543	+				-0.1
109,543	+				+0.9
109,544	-				-2.0
109,544	-				-0.2
109,544	-				+0.1
109,544	-				+0.1
109,544	-				-0.4
109,544	-				-1.3
109,573	+				+0.1
109,574	-				-0.9
109,576	+				+0.3
109,576	+				+0.3
109,577	-				+0.2
109,577	-				-2.3
109,577	-				+0.7
109,616	+				+0.1
109,616	+				+0.3
109,616	+				-0.5
109,616	+				+1.4
109,617	-				+1.3
109,617	-				+0.3