Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27040

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
5,923,662	+		AO353_27030	0.59	-0.5
5,923,662	+		AO353_27030	0.59	+0.1
5,923,662	+		AO353_27030	0.59	-0.5
5,923,663	-		AO353_27030	0.59	-0.9
5,923,663	-		AO353_27030	0.59	+2.1
5,923,733	+		AO353_27030	0.68	+0.3
5,923,765	-		AO353_27030	0.73	-1.4
5,923,790	+		AO353_27030	0.76	-0.5
5,923,790	+		AO353_27030	0.76	-1.5
5,923,790	+		AO353_27030	0.76	-1.6
5,923,790	+		AO353_27030	0.76	-2.0
5,923,791	-		AO353_27030	0.76	+2.1
5,923,791	-		AO353_27030	0.76	-0.7
5,923,791	-		AO353_27030	0.76	-1.5
5,923,791	-		AO353_27030	0.76	-2.4
5,923,791	-		AO353_27030	0.76	-0.9
5,923,793	-		AO353_27030	0.76	-0.4
5,923,793	-		AO353_27030	0.76	-0.9
5,923,919	+				+0.1
5,923,919	+				-0.7
5,923,920	-				-0.9
5,923,920	-				-1.3
5,923,933	+				+0.1
5,923,965	-				-0.7
5,923,973	+				-0.3
5,924,168	+		AO353_27035	0.28	-1.1
5,924,168	+		AO353_27035	0.28	-0.9
5,924,168	+		AO353_27035	0.28	-2.4
5,924,169	-		AO353_27035	0.28	+1.1
5,924,169	-		AO353_27035	0.28	+1.1
5,924,169	-		AO353_27035	0.28	-1.3
5,924,169	-		AO353_27035	0.28	+0.9
5,924,169	-		AO353_27035	0.28	+0.5
5,924,279	+		AO353_27035	0.44	+2.1
5,924,279	+		AO353_27035	0.44	-0.3
5,924,279	+		AO353_27035	0.44	-1.8
5,924,279	+		AO353_27035	0.44	+0.2
5,924,280	-		AO353_27035	0.45	-1.9
5,924,280	-		AO353_27035	0.45	-2.2
5,924,531	+		AO353_27035	0.81	+0.1
5,924,532	-		AO353_27035	0.82	-0.3
5,924,532	-		AO353_27035	0.82	-0.9
5,924,532	-		AO353_27035	0.82	-1.1
5,924,532	-		AO353_27035	0.82	-2.5
5,924,532	-		AO353_27035	0.82	-2.5
5,924,532	-		AO353_27035	0.82	+0.5
5,924,556	-		AO353_27035	0.85	+0.5
5,924,556	-		AO353_27035	0.85	+0.1
5,924,556	-		AO353_27035	0.85	-0.3
5,924,556	-		AO353_27035	0.85	-0.7
5,924,608	-				+1.5
5,924,608	-				-0.7
5,924,621	+				-0.9
5,924,622	-				-0.5
5,924,622	-				+0.3
5,924,697	-				-1.8
5,924,697	-				-0.3
5,924,830	+		AO353_27040	0.16	-1.9
5,924,906	+		AO353_27040	0.23	-1.6
5,924,906	+		AO353_27040	0.23	-1.8
5,924,906	+		AO353_27040	0.23	-1.0
5,924,906	+		AO353_27040	0.23	+1.1
5,924,906	+		AO353_27040	0.23	-0.5
5,924,907	-		AO353_27040	0.23	-1.5
5,924,907	-		AO353_27040	0.23	-1.7
5,924,907	-		AO353_27040	0.23	-1.3
5,924,978	-		AO353_27040	0.29	-2.5
5,924,978	-		AO353_27040	0.29	+0.1
5,925,230	+		AO353_27040	0.52	-1.8
5,925,230	+		AO353_27040	0.52	-0.9
5,925,230	+		AO353_27040	0.52	-1.8
5,925,230	+		AO353_27040	0.52	-0.3
5,925,231	-		AO353_27040	0.52	-1.9
5,925,231	-		AO353_27040	0.52	-1.7
5,925,231	-		AO353_27040	0.52	-0.5
5,925,231	-		AO353_27040	0.52	-0.8
5,925,231	-		AO353_27040	0.52	-1.0
5,925,231	-		AO353_27040	0.52	+1.1
5,925,375	+		AO353_27040	0.66	-0.8
5,925,401	+		AO353_27040	0.68	-0.1
5,925,624	+		AO353_27040	0.89	-2.0
5,925,624	+		AO353_27040	0.89	+0.1
5,925,625	-		AO353_27040	0.89	+0.7
5,925,672	-				-1.7
5,925,711	+				-0.5
5,925,711	+				+0.1
5,925,712	-				+2.1
5,925,712	-				-0.7
5,925,712	-				-2.3
5,925,712	-				+0.1
5,925,747	-				+2.1
5,925,774	+				-1.1
5,925,775	-				+2.1
5,925,775	-				-1.4
5,925,775	-				-1.4
5,925,775	-				-2.3
5,925,783	+				-0.1
5,925,784	-				-0.9
5,925,804	+				+1.1
5,925,854	+				-2.2
5,925,854	+				-1.3
5,925,854	+				-1.6
5,925,854	+				-1.4
5,925,854	+				+1.1
5,925,854	+				+1.2
5,925,855	-				-0.1
5,925,855	-				-0.3
5,925,855	-				-2.5
5,925,855	-				-0.3
5,925,855	-				-0.4
5,925,855	-				-1.1
5,925,871	+				+0.1
5,925,872	-				-1.8
5,925,962	-				+0.3
5,925,982	-				+0.1
5,926,152	+		AO353_27045	0.13	-0.5
5,926,152	+		AO353_27045	0.13	-0.9
5,926,152	+		AO353_27045	0.13	-0.5
5,926,152	+		AO353_27045	0.13	+0.2
5,926,153	-		AO353_27045	0.13	-0.3
5,926,620	+		AO353_27045	0.42	+0.1
5,926,620	+		AO353_27045	0.42	-0.4
5,926,620	+		AO353_27045	0.42	-0.4
5,926,621	-		AO353_27045	0.42	-0.4
5,926,621	-		AO353_27045	0.42	+0.7