Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27035

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
5,923,002	+				+1.1
5,923,010	-				-0.5
5,923,079	+				+0.3
5,923,080	-				+0.7
5,923,080	-				+0.3
5,923,086	+				-1.1
5,923,086	+				+0.1
5,923,087	-				+1.1
5,923,087	-				-0.9
5,923,112	-				-0.8
5,923,113	+				-0.5
5,923,113	+				-0.1
5,923,113	+				+0.8
5,923,114	-				+2.1
5,923,115	+				+0.5
5,923,115	+				+2.1
5,923,115	+				+2.1
5,923,115	+				+0.2
5,923,115	+				+1.1
5,923,115	+				+0.7
5,923,116	-				-0.6
5,923,123	+				-0.6
5,923,124	-				-0.4
5,923,124	-				+0.5
5,923,126	-				-0.6
5,923,127	+				-2.5
5,923,127	+				+0.1
5,923,128	-				-2.3
5,923,213	+				+1.5
5,923,213	+				-1.5
5,923,213	+				+0.7
5,923,213	+				-0.6
5,923,409	+		AO353_27030	0.26	-0.7
5,923,409	+		AO353_27030	0.26	-1.3
5,923,410	-		AO353_27030	0.26	-0.2
5,923,410	-		AO353_27030	0.26	-2.5
5,923,410	-		AO353_27030	0.26	-2.8
5,923,410	-		AO353_27030	0.26	-2.0
5,923,521	-		AO353_27030	0.41	-2.6
5,923,562	+		AO353_27030	0.46	+1.1
5,923,562	+		AO353_27030	0.46	+0.7
5,923,562	+		AO353_27030	0.46	-1.1
5,923,601	+		AO353_27030	0.51	+1.1
5,923,601	+		AO353_27030	0.51	+0.1
5,923,601	+		AO353_27030	0.51	+2.1
5,923,602	-		AO353_27030	0.51	-0.3
5,923,602	-		AO353_27030	0.51	-1.1
5,923,602	-		AO353_27030	0.51	-1.0
5,923,602	-		AO353_27030	0.51	-0.9
5,923,602	-		AO353_27030	0.51	-0.8
5,923,662	+		AO353_27030	0.59	-0.5
5,923,662	+		AO353_27030	0.59	+0.1
5,923,662	+		AO353_27030	0.59	-0.5
5,923,663	-		AO353_27030	0.59	-0.9
5,923,663	-		AO353_27030	0.59	+2.1
5,923,733	+		AO353_27030	0.68	+0.3
5,923,765	-		AO353_27030	0.73	-1.4
5,923,790	+		AO353_27030	0.76	-0.5
5,923,790	+		AO353_27030	0.76	-1.5
5,923,790	+		AO353_27030	0.76	-1.6
5,923,790	+		AO353_27030	0.76	-2.0
5,923,791	-		AO353_27030	0.76	+2.1
5,923,791	-		AO353_27030	0.76	-0.7
5,923,791	-		AO353_27030	0.76	-1.5
5,923,791	-		AO353_27030	0.76	-2.4
5,923,791	-		AO353_27030	0.76	-0.9
5,923,793	-		AO353_27030	0.76	-0.4
5,923,793	-		AO353_27030	0.76	-0.9
5,923,919	+				+0.1
5,923,919	+				-0.7
5,923,920	-				-0.9
5,923,920	-				-1.3
5,923,933	+				+0.1
5,923,965	-				-0.7
5,923,973	+				-0.3
5,924,168	+		AO353_27035	0.28	-1.1
5,924,168	+		AO353_27035	0.28	-0.9
5,924,168	+		AO353_27035	0.28	-2.4
5,924,169	-		AO353_27035	0.28	+1.1
5,924,169	-		AO353_27035	0.28	+1.1
5,924,169	-		AO353_27035	0.28	-1.3
5,924,169	-		AO353_27035	0.28	+0.9
5,924,169	-		AO353_27035	0.28	+0.5
5,924,279	+		AO353_27035	0.44	+2.1
5,924,279	+		AO353_27035	0.44	-0.3
5,924,279	+		AO353_27035	0.44	-1.8
5,924,279	+		AO353_27035	0.44	+0.2
5,924,280	-		AO353_27035	0.45	-1.9
5,924,280	-		AO353_27035	0.45	-2.2
5,924,531	+		AO353_27035	0.81	+0.1
5,924,532	-		AO353_27035	0.82	-0.3
5,924,532	-		AO353_27035	0.82	-0.9
5,924,532	-		AO353_27035	0.82	-1.1
5,924,532	-		AO353_27035	0.82	-2.5
5,924,532	-		AO353_27035	0.82	-2.5
5,924,532	-		AO353_27035	0.82	+0.5
5,924,556	-		AO353_27035	0.85	+0.5
5,924,556	-		AO353_27035	0.85	+0.1
5,924,556	-		AO353_27035	0.85	-0.3
5,924,556	-		AO353_27035	0.85	-0.7
5,924,608	-				+1.5
5,924,608	-				-0.7
5,924,621	+				-0.9
5,924,622	-				-0.5
5,924,622	-				+0.3
5,924,697	-				-1.8
5,924,697	-				-0.3
5,924,830	+		AO353_27040	0.16	-1.9
5,924,906	+		AO353_27040	0.23	-1.6
5,924,906	+		AO353_27040	0.23	-1.8
5,924,906	+		AO353_27040	0.23	-1.0
5,924,906	+		AO353_27040	0.23	+1.1
5,924,906	+		AO353_27040	0.23	-0.5
5,924,907	-		AO353_27040	0.23	-1.5
5,924,907	-		AO353_27040	0.23	-1.7
5,924,907	-		AO353_27040	0.23	-1.3
5,924,978	-		AO353_27040	0.29	-2.5
5,924,978	-		AO353_27040	0.29	+0.1
5,925,230	+		AO353_27040	0.52	-1.8
5,925,230	+		AO353_27040	0.52	-0.9
5,925,230	+		AO353_27040	0.52	-1.8
5,925,230	+		AO353_27040	0.52	-0.3
5,925,231	-		AO353_27040	0.52	-1.9
5,925,231	-		AO353_27040	0.52	-1.7
5,925,231	-		AO353_27040	0.52	-0.5
5,925,231	-		AO353_27040	0.52	-0.8
5,925,231	-		AO353_27040	0.52	-1.0
5,925,231	-		AO353_27040	0.52	+1.1
5,925,375	+		AO353_27040	0.66	-0.8
5,925,401	+		AO353_27040	0.68	-0.1
5,925,624	+		AO353_27040	0.89	-2.0
5,925,624	+		AO353_27040	0.89	+0.1
5,925,625	-		AO353_27040	0.89	+0.7