Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25665

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
5,658,738	-		AO353_25660	0.33	+0.2
5,658,752	+		AO353_25660	0.35	+0.7
5,658,818	+		AO353_25660	0.44	+0.3
5,658,929	+		AO353_25660	0.58	-1.5
5,658,930	-		AO353_25660	0.58	+1.3
5,658,930	-		AO353_25660	0.58	-1.4
5,659,263	+				+1.6
5,659,263	+				-0.9
5,659,263	+				+2.1
5,659,263	+				-1.0
5,659,263	+				+1.1
5,659,263	+				-0.5
5,659,264	-				-1.1
5,659,264	-				-2.1
5,659,264	-				-1.8
5,659,264	-				+0.1
5,659,264	-				-0.1
5,659,264	-				-1.1
5,659,285	+				-1.1
5,659,367	+				+2.8
5,659,367	+				-0.7
5,659,367	+				-1.3
5,659,367	+				+2.5
5,659,368	-				-0.3
5,659,556	-				+2.5
5,659,559	-				+0.6
5,659,591	-				-0.8
5,659,591	-				+0.2
5,659,593	+				-0.4
5,659,620	+				+1.7
5,659,620	+				-1.1
5,659,620	+				+1.1
5,659,620	+				-0.7
5,659,621	-				-0.8
5,659,621	-				-1.9
5,659,621	-				+0.1
5,659,621	-				-0.5
5,659,621	-				+0.1
5,659,621	-				+1.7
5,659,632	-				+0.5
5,659,685	+				+1.1
5,659,686	-				-1.4
5,659,686	-				+0.3
5,659,686	-				+1.1
5,659,697	+				+1.6
5,659,698	-				-0.3
5,659,698	-				-1.5
5,659,698	-				+0.5
5,659,698	-				-0.3
5,659,711	+				-0.3
5,659,711	+				+1.4
5,659,711	+				-0.5
5,660,025	+		AO353_25665	0.28	-0.1
5,660,026	-		AO353_25665	0.28	+1.1
5,660,181	+		AO353_25665	0.42	-0.9
5,660,205	+		AO353_25665	0.44	-0.5
5,660,205	+		AO353_25665	0.44	-1.1
5,660,205	+		AO353_25665	0.44	-1.5
5,660,205	+		AO353_25665	0.44	-2.3
5,660,241	+		AO353_25665	0.47	+0.8
5,660,241	+		AO353_25665	0.47	-0.9
5,660,241	+		AO353_25665	0.47	+0.7
5,660,241	+		AO353_25665	0.47	-1.6
5,660,241	+		AO353_25665	0.47	-1.3
5,660,286	+		AO353_25665	0.51	-1.4
5,660,286	+		AO353_25665	0.51	-0.9
5,660,287	-		AO353_25665	0.52	-2.3
5,660,308	-		AO353_25665	0.53	+0.5
5,660,396	-		AO353_25665	0.61	-0.3
5,660,414	-		AO353_25665	0.63	+0.5
5,660,561	-		AO353_25665	0.76	-0.4
5,660,594	-		AO353_25665	0.79	+1.1
5,661,015	+		AO353_25670	0.16	-0.9
5,661,015	+		AO353_25670	0.16	-0.5
5,661,015	+		AO353_25670	0.16	+2.8
5,661,015	+		AO353_25670	0.16	+1.1
5,661,016	-		AO353_25670	0.16	-0.8
5,661,016	-		AO353_25670	0.16	+2.1
5,661,016	-		AO353_25670	0.16	-2.0
5,661,024	+		AO353_25670	0.17	+1.5
5,661,024	+		AO353_25670	0.17	+1.7
5,661,024	+		AO353_25670	0.17	+1.5
5,661,025	-		AO353_25670	0.17	+1.1
5,661,033	+		AO353_25670	0.18	+2.1
5,661,129	+		AO353_25670	0.26	-0.9
5,661,129	+		AO353_25670	0.26	-0.7
5,661,129	+		AO353_25670	0.26	-0.1
5,661,129	+		AO353_25670	0.26	-1.4
5,661,129	+		AO353_25670	0.26	-1.1
5,661,129	+		AO353_25670	0.26	-0.5
5,661,130	-		AO353_25670	0.26	-0.9
5,661,130	-		AO353_25670	0.26	+0.1
5,661,407	+		AO353_25670	0.50	+0.6
5,661,407	+		AO353_25670	0.50	-1.9