Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25420

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
5,603,776	+		AO353_25415	0.26	-2.3
5,603,777	-		AO353_25415	0.26	-1.0
5,603,777	-		AO353_25415	0.26	-0.3
5,603,777	-		AO353_25415	0.26	+0.0
5,603,777	-		AO353_25415	0.26	-1.3
5,603,989	+		AO353_25415	0.50	-1.5
5,603,990	-		AO353_25415	0.50	-1.7
5,604,042	-		AO353_25415	0.56	+0.0
5,604,042	-		AO353_25415	0.56	-1.5
5,604,042	-		AO353_25415	0.56	-0.5
5,604,223	+		AO353_25415	0.76	-1.1
5,604,223	+		AO353_25415	0.76	+0.0
5,604,223	+		AO353_25415	0.76	-0.8
5,604,224	-		AO353_25415	0.77	-2.0
5,604,361	+				-0.5
5,604,361	+				-0.7
5,604,362	-				-0.7
5,604,478	+				-1.3
5,604,514	+				-0.5
5,604,515	-				-0.3
5,604,515	-				+0.3
5,604,608	+				-0.3
5,604,612	-				-0.3
5,604,731	-				-1.4
5,604,741	+				-0.8
5,604,742	-				+0.5
5,604,742	-				+1.1
5,604,839	+		AO353_25420	0.14	+0.9
5,604,903	+		AO353_25420	0.20	-1.1
5,604,950	+		AO353_25420	0.24	+1.1
5,604,966	+		AO353_25420	0.25	-0.2
5,604,966	+		AO353_25420	0.25	-1.6
5,604,966	+		AO353_25420	0.25	-0.1
5,605,184	+		AO353_25420	0.45	-0.8
5,605,184	+		AO353_25420	0.45	+0.5
5,605,184	+		AO353_25420	0.45	-1.5
5,605,185	-		AO353_25420	0.45	+1.5
5,605,185	-		AO353_25420	0.45	-1.0
5,605,185	-		AO353_25420	0.45	-1.4
5,605,289	+		AO353_25420	0.54	-0.9
5,605,289	+		AO353_25420	0.54	-1.4
5,605,289	+		AO353_25420	0.54	+0.1
5,605,290	-		AO353_25420	0.54	-2.0
5,605,388	+		AO353_25420	0.63	-1.5
5,605,392	+		AO353_25420	0.64	+1.1
5,605,392	+		AO353_25420	0.64	-0.3
5,605,392	+		AO353_25420	0.64	-0.1
5,605,392	+		AO353_25420	0.64	-0.5
5,605,392	+		AO353_25420	0.64	-1.4
5,605,392	+		AO353_25420	0.64	-1.5
5,605,392	+		AO353_25420	0.64	-0.6
5,605,393	-				+2.1
5,605,393	-		AO353_25420	0.64	-1.1
5,605,393	-		AO353_25420	0.64	-0.3
5,605,537	+		AO353_25420	0.76	-0.9
5,605,538	-		AO353_25420	0.77	-1.5
5,605,662	+		AO353_25420	0.88	-0.0
5,605,853	+				-0.4
5,605,853	+				+1.5
5,605,853	+				-0.6
5,606,001	+		AO353_25425	0.20	-0.3
5,606,002	-		AO353_25425	0.20	+0.9
5,606,002	-		AO353_25425	0.20	-1.3
5,606,058	+		AO353_25425	0.26	+1.1
5,606,059	-		AO353_25425	0.26	-0.5
5,606,112	-		AO353_25425	0.32	-0.3
5,606,112	-		AO353_25425	0.32	+1.6
5,606,112	-		AO353_25425	0.32	-1.5
5,606,229	+		AO353_25425	0.45	-0.5
5,606,229	+		AO353_25425	0.45	+0.6
5,606,319	+		AO353_25425	0.55	-1.1
5,606,319	+		AO353_25425	0.55	+2.1
5,606,320	-		AO353_25425	0.55	-0.9
5,606,320	-		AO353_25425	0.55	+0.5
5,606,320	-				+1.1
5,606,320	-		AO353_25425	0.55	-0.3
5,606,320	-		AO353_25425	0.55	+0.5
5,606,320	-		AO353_25425	0.55	-1.3
5,606,320	-		AO353_25425	0.55	+0.5
5,606,320	-		AO353_25425	0.55	+2.1
5,606,352	+		AO353_25425	0.58	+0.6
5,606,353	-		AO353_25425	0.58	-0.2
5,606,353	-		AO353_25425	0.58	-0.4
5,606,353	-		AO353_25425	0.58	+1.1
5,606,385	+		AO353_25425	0.62	-0.4
5,606,439	+		AO353_25425	0.68	+0.9
5,606,439	+		AO353_25425	0.68	-0.5
5,606,688	+				-1.8
5,606,689	-				-1.8
5,606,689	-				+1.1
5,606,689	-				+0.7
5,606,689	-				-0.2
5,606,733	+				-1.4
5,606,733	+				+0.5
5,606,734	-				-0.3
5,606,734	-				+0.6
5,606,734	-				+0.7
5,606,745	+				-0.8
5,606,746	-				-1.1
5,606,746	-				-0.9