Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24790

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
5,463,635	+				-0.6
5,463,635	+				+1.0
5,463,635	+				-0.4
5,463,636	-				-1.3
5,463,636	-				+1.0
5,463,644	+				-0.8
5,463,644	+				-0.8
5,463,779	+				-0.2
5,463,941	+		AO353_24785	0.27	+0.8
5,463,941	+		AO353_24785	0.27	+0.2
5,463,941	+		AO353_24785	0.27	+0.8
5,463,941	+		AO353_24785	0.27	-0.8
5,463,941	+		AO353_24785	0.27	+0.0
5,463,942	-		AO353_24785	0.27	+0.4
5,463,942	-		AO353_24785	0.27	-1.7
5,463,942	-		AO353_24785	0.27	-0.4
5,463,942	-		AO353_24785	0.27	-1.6
5,463,942	-		AO353_24785	0.27	-0.6
5,463,942	-		AO353_24785	0.27	-0.8
5,463,989	+		AO353_24785	0.32	-2.2
5,463,989	+		AO353_24785	0.32	-1.3
5,463,989	+		AO353_24785	0.32	-0.3
5,463,989	+		AO353_24785	0.32	-0.5
5,463,990	-		AO353_24785	0.32	-0.8
5,464,048	-		AO353_24785	0.38	+1.0
5,464,048	-		AO353_24785	0.38	-0.6
5,464,048	-		AO353_24785	0.38	-1.3
5,464,205	-		AO353_24785	0.55	-0.3
5,464,388	+		AO353_24785	0.75	+0.3
5,464,388	+		AO353_24785	0.75	-0.7
5,464,388	+		AO353_24785	0.75	-0.2
5,464,388	+		AO353_24785	0.75	-1.3
5,464,389	-		AO353_24785	0.75	-0.2
5,464,389	-		AO353_24785	0.75	+0.8
5,464,389	-		AO353_24785	0.75	-2.1
5,464,561	-				-0.1
5,464,646	-				-1.0
5,464,805	+		AO353_24790	0.31	+0.2
5,464,805	+		AO353_24790	0.31	-1.4
5,464,805	+		AO353_24790	0.31	-0.7
5,464,806	-		AO353_24790	0.31	+0.4
5,464,820	+		AO353_24790	0.34	+0.0
5,464,820	+		AO353_24790	0.34	-1.3
5,464,820	+		AO353_24790	0.34	+0.0
5,464,820	+		AO353_24790	0.34	-1.7
5,464,821	-		AO353_24790	0.34	-0.2
5,464,821	-		AO353_24790	0.34	+1.0
5,464,821	-		AO353_24790	0.34	-2.2
5,464,821	-		AO353_24790	0.34	-0.9
5,464,821	-		AO353_24790	0.34	-0.3
5,464,908	-		AO353_24790	0.49	-0.8
5,465,046	-		AO353_24790	0.72	-2.4
5,465,075	+		AO353_24790	0.77	-1.7
5,465,075	+		AO353_24790	0.77	-0.9
5,465,075	+		AO353_24790	0.77	-1.6
5,465,075	+		AO353_24790	0.77	+0.4
5,465,076	-		AO353_24790	0.77	-0.6
5,465,076	-		AO353_24790	0.77	-2.2
5,465,277	+				-0.3
5,465,277	+				-1.6
5,465,278	-				+1.0
5,465,279	+				-0.2
5,465,280	-				-0.6
5,465,292	+				+0.4
5,465,293	-				-0.6
5,465,295	-				+0.4
5,465,295	-				-1.2
5,465,295	-				+0.4
5,465,334	+				-1.2
5,465,335	-				-1.0
5,465,505	+		AO353_24795	0.10	-1.6
5,465,505	+		AO353_24795	0.10	-2.4
5,465,530	-		AO353_24795	0.12	-1.1
5,465,541	+		AO353_24795	0.12	-1.0
5,465,542	-		AO353_24795	0.12	-1.2
5,465,566	+		AO353_24795	0.13	+0.2
5,465,566	+		AO353_24795	0.13	-1.2
5,465,566	+		AO353_24795	0.13	+2.0
5,465,566	+		AO353_24795	0.13	+0.0
5,465,566	+		AO353_24795	0.13	-0.8
5,465,567	-		AO353_24795	0.13	+0.8
5,465,567	-		AO353_24795	0.13	-0.8
5,465,567	-		AO353_24795	0.13	+0.0
5,465,599	-		AO353_24795	0.15	+1.1
5,465,599	-		AO353_24795	0.15	+2.6
5,465,599	-		AO353_24795	0.15	-0.6
5,465,599	-		AO353_24795	0.15	-0.6
5,465,809	-		AO353_24795	0.26	+0.0
5,466,012	+		AO353_24795	0.36	+0.8
5,466,012	+		AO353_24795	0.36	+0.4
5,466,012	+		AO353_24795	0.36	-1.9
5,466,197	-		AO353_24795	0.46	+3.0
5,466,197	-		AO353_24795	0.46	+1.3
5,466,197	-		AO353_24795	0.46	-1.0