Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24750

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
5,453,321	-				-0.7
5,453,321	-				-0.2
5,453,339	+				-0.3
5,453,339	+				+1.0
5,453,339	+				+1.0
5,453,339	+				+2.0
5,453,339	+				+2.0
5,453,340	-				-0.3
5,453,340	-				-0.7
5,453,419	+				-0.3
5,453,419	+				-0.9
5,453,513	+		AO353_24740	0.26	-0.0
5,453,520	+		AO353_24740	0.27	-0.6
5,453,521	-		AO353_24740	0.28	-0.5
5,453,662	+		AO353_24740	0.64	-1.0
5,453,663	-		AO353_24740	0.64	+0.7
5,453,663	-		AO353_24740	0.64	+1.3
5,453,693	+		AO353_24740	0.72	+0.1
5,453,931	+		AO353_24745	0.54	-0.4
5,453,931	+		AO353_24745	0.54	-0.1
5,453,982	-		AO353_24745	0.76	-1.8
5,454,023	-				+0.1
5,454,023	-				-0.3
5,454,029	-				+1.4
5,454,038	+				+2.0
5,454,039	-				+0.6
5,454,039	-				+0.1
5,454,050	-				+2.6
5,454,050	-				-1.2
5,454,178	+				-1.2
5,454,178	+				+2.0
5,454,179	-				+0.4
5,454,179	-				-0.2
5,454,179	-				+0.0
5,454,179	-				-0.9
5,454,215	-				+0.0
5,454,311	-				+2.0
5,454,345	+				-0.3
5,454,345	+				-0.6
5,454,345	+				-0.9
5,454,345	+				-0.6
5,454,346	-				+0.8
5,454,346	-				-2.0
5,454,346	-				-0.8
5,454,348	+				-1.9
5,454,349	-				-1.3
5,454,349	-				+2.0
5,454,349	-				+2.0
5,454,393	+				-0.2
5,454,393	+				+0.2
5,454,394	-				-1.0
5,454,525	+		AO353_24750	0.13	+3.3
5,454,535	+		AO353_24750	0.13	-2.8
5,454,633	-		AO353_24750	0.19	+2.6
5,454,633	-		AO353_24750	0.19	+0.3
5,454,878	+		AO353_24750	0.34	-0.7
5,454,878	+		AO353_24750	0.34	+1.0
5,454,878	+		AO353_24750	0.34	+0.0
5,454,879	-		AO353_24750	0.34	-0.3
5,454,882	+		AO353_24750	0.34	-0.4
5,454,951	+		AO353_24750	0.38	+1.0
5,454,952	-		AO353_24750	0.39	+0.4
5,454,952	-		AO353_24750	0.39	-1.2
5,454,952	-		AO353_24750	0.39	+1.0
5,454,952	-		AO353_24750	0.39	+0.2
5,454,952	-		AO353_24750	0.39	-0.3
5,455,292	+		AO353_24750	0.59	+0.5
5,455,292	+		AO353_24750	0.59	+0.6
5,455,292	+		AO353_24750	0.59	+0.3
5,455,392	+		AO353_24750	0.65	+0.4
5,455,393	-		AO353_24750	0.65	-0.8
5,455,393	-		AO353_24750	0.65	+0.4
5,455,434	+		AO353_24750	0.68	-0.3
5,455,434	+		AO353_24750	0.68	-0.6
5,455,434	+		AO353_24750	0.68	+0.2
5,455,435	-		AO353_24750	0.68	-0.7
5,455,435	-		AO353_24750	0.68	-1.0
5,455,435	-		AO353_24750	0.68	-1.3
5,455,836	+				+0.0
5,455,938	+				+0.3
5,455,938	+				+1.0
5,455,939	-				-0.5
5,455,970	+				-0.8
5,455,970	+				+1.6
5,455,970	+				-0.2
5,455,970	+				+2.0
5,455,971	-				-0.6
5,455,971	-				-1.0
5,455,971	-				-1.0
5,455,971	-				+0.2
5,455,971	-				+0.4
5,455,971	-				-0.6
5,455,971	-				+0.0
5,455,971	-				+0.4
5,455,971	-				-1.2
5,455,971	-				-1.3
5,455,973	-				-1.1
5,456,105	+				-0.3
5,456,136	-				-0.8
5,456,210	+		AO353_24755	0.11	-1.0
5,456,210	+		AO353_24755	0.11	-0.6
5,456,211	-		AO353_24755	0.11	+2.0
5,456,277	-		AO353_24755	0.14	+0.2
5,456,333	+		AO353_24755	0.16	-0.8
5,456,333	+		AO353_24755	0.16	+0.4
5,456,334	-		AO353_24755	0.16	+0.8
5,456,487	+		AO353_24755	0.23	-0.3
5,456,746	-		AO353_24755	0.35	+0.0
5,456,843	+		AO353_24755	0.39	+2.3
5,456,843	+		AO353_24755	0.39	+1.3
5,456,934	+		AO353_24755	0.43	-0.3
5,456,934	+		AO353_24755	0.43	-0.2
5,456,934	+		AO353_24755	0.43	-0.3
5,456,934	+		AO353_24755	0.43	-0.8
5,456,934	+		AO353_24755	0.43	-1.3
5,456,934	+		AO353_24755	0.43	+1.0
5,456,935	-		AO353_24755	0.43	+0.2
5,456,935	-		AO353_24755	0.43	+0.6
5,456,935	-		AO353_24755	0.43	-1.9
5,456,942	+		AO353_24755	0.43	+0.9
5,456,945	+		AO353_24755	0.43	-1.0
5,456,945	+		AO353_24755	0.43	-2.2
5,456,946	-		AO353_24755	0.43	+0.4