Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24090

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
5,302,418	+				-1.9
5,302,418	+				+1.0
5,302,419	-				-0.5
5,302,419	-				-0.5
5,302,419	-				+2.0
5,302,419	-				-0.3
5,302,419	-				-1.4
5,302,419	-				+0.2
5,302,450	+				-1.4
5,302,450	+				-0.9
5,302,450	+				-0.8
5,302,451	-				-1.3
5,302,479	+				-0.4
5,302,480	-				+1.5
5,302,480	-				+0.5
5,302,480	-				-1.0
5,302,599	-				-0.1
5,302,759	+				-0.5
5,302,760	-				-1.5
5,302,760	-				+1.0
5,302,760	-				-0.5
5,302,760	-				-1.0
5,302,789	+				-0.1
5,302,789	+				+0.0
5,302,789	+				+1.3
5,302,789	+				+0.7
5,302,789	+				-0.5
5,302,789	+				-0.4
5,302,789	+				+0.0
5,302,790	-				+0.2
5,302,790	-				+0.7
5,302,790	-				+1.2
5,302,790	-				+0.0
5,302,790	-				-1.4
5,302,790	-				-0.5
5,302,790	-				-0.7
5,302,793	+				-1.1
5,302,793	+				+1.6
5,302,793	+				-0.3
5,302,794	-				+1.4
5,302,936	+				+2.0
5,302,993	+				-0.2
5,302,994	-				-0.0
5,303,129	+				+3.6
5,303,129	+				+2.0
5,303,130	-				+0.5
5,303,130	-				+0.5
5,303,235	-				-0.3
5,303,242	+				+0.4
5,303,242	+				-0.3
5,303,243	-				-0.5
5,303,243	-				-1.5
5,303,287	+				-0.8
5,303,287	+				-1.9
5,303,287	+				-0.8
5,303,287	+				+0.0
5,303,287	+				-1.1
5,303,288	-				+0.7
5,303,288	-				-0.8
5,303,288	-				-0.1
5,303,371	-				+1.6
5,303,434	+		AO353_24090	0.13	-1.8
5,303,435	-		AO353_24090	0.13	-0.5
5,303,443	+		AO353_24090	0.15	-0.3
5,303,443	+		AO353_24090	0.15	+0.3
5,303,444	-		AO353_24090	0.15	-1.0
5,303,444	-		AO353_24090	0.15	+0.7
5,303,444	-		AO353_24090	0.15	+0.5
5,303,444	-		AO353_24090	0.15	-1.0
5,303,463	+		AO353_24090	0.18	+1.5
5,303,463	+		AO353_24090	0.18	-0.4
5,303,463	+		AO353_24090	0.18	-1.5
5,303,463	+		AO353_24090	0.18	-1.0
5,303,464	-		AO353_24090	0.18	-1.1
5,303,464	-		AO353_24090	0.18	-0.3
5,303,520	+		AO353_24090	0.28	-1.5
5,303,547	+		AO353_24090	0.32	-1.0
5,303,548	-		AO353_24090	0.33	+1.7
5,303,582	-		AO353_24090	0.38	-1.3
5,303,595	+		AO353_24090	0.41	-1.0
5,303,595	+		AO353_24090	0.41	-2.4
5,303,632	+		AO353_24090	0.47	-0.7
5,303,632	+		AO353_24090	0.47	+0.8
5,303,632	+		AO353_24090	0.47	-1.0
5,303,633	-		AO353_24090	0.47	-1.8
5,303,633	-		AO353_24090	0.47	-1.8
5,303,633	-		AO353_24090	0.47	-1.5
5,303,633	-		AO353_24090	0.47	-0.5
5,303,633	-		AO353_24090	0.47	-2.1
5,303,633	-		AO353_24090	0.47	-0.3
5,303,633	-		AO353_24090	0.47	-1.9
5,303,650	+		AO353_24090	0.50	+1.3
5,303,650	+		AO353_24090	0.50	+1.0
5,303,650	+		AO353_24090	0.50	-0.8
5,303,650	+		AO353_24090	0.50	-0.3
5,303,650	+		AO353_24090	0.50	-2.0
5,303,651	-		AO353_24090	0.50	+0.0
5,303,651	-		AO353_24090	0.50	-0.8
5,303,651	-		AO353_24090	0.50	-1.0
5,303,907	-				-1.4
5,303,910	+				+0.5
5,303,910	+				+1.0
5,303,911	-				-1.1
5,303,911	-				+0.3
5,304,015	+				+0.0
5,304,056	+				-0.4
5,304,056	+				+1.0
5,304,056	+				-1.4
5,304,057	-				+0.1
5,304,057	-				+1.6
5,304,057	-				-0.7
5,304,057	-				-1.0
5,304,057	-				-0.9
5,304,057	-				-1.3
5,304,356	+		AO353_24095	0.29	-2.0
5,304,371	-		AO353_24095	0.31	-1.9
5,304,392	+		AO353_24095	0.33	+0.3
5,304,393	-		AO353_24095	0.33	+0.4
5,304,546	-		AO353_24095	0.50	+0.2
5,304,587	+		AO353_24095	0.55	+1.3
5,304,627	+		AO353_24095	0.59	+1.0
5,304,731	+		AO353_24095	0.71	+0.5
5,304,732	-		AO353_24095	0.71	-2.3
5,304,732	-		AO353_24095	0.71	+2.0
5,304,732	-		AO353_24095	0.71	+1.0
5,304,782	+		AO353_24095	0.76	-1.7
5,304,782	+		AO353_24095	0.76	+0.8
5,304,783	-		AO353_24095	0.76	-0.8
5,304,783	-		AO353_24095	0.76	+0.7
5,304,783	-		AO353_24095	0.76	+0.5
5,304,837	-		AO353_24095	0.82	-0.8