Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22135

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,848,882	-		AO353_22125	0.62	+0.1
4,848,882	-		AO353_22125	0.62	+0.1
4,848,892	-		AO353_22125	0.62	+1.1
4,848,892	-		AO353_22125	0.62	+1.3
4,848,910	+		AO353_22125	0.63	+0.1
4,848,910	+		AO353_22125	0.63	+2.1
4,848,910	+		AO353_22125	0.63	-3.1
4,848,910	+		AO353_22125	0.63	+0.5
4,848,911	-		AO353_22125	0.63	-0.9
4,849,031	-		AO353_22125	0.69	-0.5
4,849,231	+		AO353_22125	0.79	-1.1
4,849,231	+		AO353_22125	0.79	+0.1
4,849,231	+		AO353_22125	0.79	-0.6
4,849,232	-		AO353_22125	0.79	-0.0
4,849,232	-		AO353_22125	0.79	-0.9
4,849,267	+		AO353_22125	0.81	-2.9
4,849,336	+		AO353_22125	0.84	+0.1
4,849,339	+		AO353_22125	0.84	-1.6
4,849,340	-		AO353_22125	0.84	+3.1
4,849,423	+		AO353_22125	0.88	-0.5
4,849,423	+		AO353_22125	0.88	+0.5
4,849,424	-		AO353_22125	0.88	-1.8
4,849,424	-		AO353_22125	0.88	-2.4
4,849,424	-		AO353_22125	0.88	-0.1
4,849,450	+		AO353_22125	0.90	-0.3
4,849,450	+		AO353_22125	0.90	-1.4
4,849,450	+		AO353_22125	0.90	-0.9
4,849,450	+		AO353_22125	0.90	-0.9
4,849,451	-		AO353_22125	0.90	-1.6
4,849,451	-		AO353_22125	0.90	+0.1
4,849,451	-		AO353_22125	0.90	+0.2
4,849,451	-		AO353_22125	0.90	+0.1
4,849,451	-		AO353_22125	0.90	-1.1
4,849,451	-		AO353_22125	0.90	-0.7
4,849,451	-		AO353_22125	0.90	-0.5
4,849,451	-		AO353_22125	0.90	-1.6
4,849,451	-		AO353_22125	0.90	+3.7
4,849,451	-		AO353_22125	0.90	-1.4
4,849,451	-		AO353_22125	0.90	-2.3
4,849,451	-		AO353_22125	0.90	+0.5
4,849,451	-		AO353_22125	0.90	-0.3
4,849,451	-		AO353_22125	0.90	+0.1
4,849,573	+				-0.3
4,849,574	-				-2.4
4,849,574	-				-0.5
4,849,791	-		AO353_22130	0.61	-1.1
4,849,962	-		AO353_22135	0.16	-0.7
4,850,300	+		AO353_22135	0.64	-0.7
4,850,301	-		AO353_22135	0.64	+1.1
4,850,301	-		AO353_22135	0.64	-0.9
4,850,301	-		AO353_22135	0.64	-1.9
4,850,301	-		AO353_22135	0.64	+0.1
4,850,324	+		AO353_22135	0.68	-1.3
4,850,325	-		AO353_22135	0.68	-0.7
4,850,622	+				-1.5
4,850,623	-				-1.7
4,850,623	-				-0.1
4,850,664	-				+0.2
4,850,694	+				-0.3
4,850,721	+		AO353_22140	0.11	-0.0
4,850,771	-		AO353_22140	0.15	+1.1
4,850,771	-		AO353_22140	0.15	-1.4
4,850,771	-				-0.9
4,850,778	+		AO353_22140	0.15	+0.3
4,850,778	+		AO353_22140	0.15	+1.5
4,850,778	+		AO353_22140	0.15	-1.9
4,850,778	+		AO353_22140	0.15	-0.7
4,850,857	+		AO353_22140	0.21	-0.5
4,850,857	+		AO353_22140	0.21	-1.4
4,850,858	-		AO353_22140	0.21	-0.3
4,850,858	-		AO353_22140	0.21	-1.5
4,850,858	-		AO353_22140	0.21	+0.4
4,850,944	+		AO353_22140	0.27	-1.6
4,850,944	+		AO353_22140	0.27	+0.5
4,850,944	+		AO353_22140	0.27	-0.5
4,850,944	+		AO353_22140	0.27	-0.7
4,850,944	+		AO353_22140	0.27	+1.1
4,850,944	+		AO353_22140	0.27	+0.5
4,850,945	-		AO353_22140	0.28	+0.1
4,850,945	-		AO353_22140	0.28	-0.9
4,850,945	-		AO353_22140	0.28	-0.5
4,850,945	-		AO353_22140	0.28	+2.1
4,850,999	-		AO353_22140	0.31	+0.3
4,851,165	-		AO353_22140	0.43	-0.3
4,851,532	+		AO353_22140	0.70	+2.1
4,851,533	-		AO353_22140	0.70	+0.5