Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22125

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,846,854	-		AO353_22120	0.54	+0.1
4,846,854	-		AO353_22120	0.54	-0.4
4,847,021	+		AO353_22120	0.70	-1.0
4,847,021	+		AO353_22120	0.70	-1.4
4,847,022	-		AO353_22120	0.70	+0.5
4,847,022	-		AO353_22120	0.70	+1.1
4,847,022	-		AO353_22120	0.70	-1.4
4,847,022	-		AO353_22120	0.70	+0.5
4,847,166	+		AO353_22120	0.85	-0.7
4,847,166	+		AO353_22120	0.85	-0.9
4,847,167	-		AO353_22120	0.85	-0.7
4,847,175	+		AO353_22120	0.86	-1.9
4,847,176	-		AO353_22120	0.86	-1.0
4,847,405	+				-0.2
4,847,429	+				-0.6
4,847,429	+				+0.1
4,847,442	-				-1.1
4,847,442	-				+0.8
4,847,609	-				+2.1
4,847,618	+				-1.2
4,847,618	+				-1.7
4,847,618	+				+0.5
4,847,618	+				+0.5
4,847,619	-				-0.4
4,847,619	-				-2.6
4,847,619	-				-0.5
4,847,619	-				-2.5
4,847,620	+				-1.6
4,847,620	+				+0.8
4,847,620	+				-1.7
4,847,620	+				+0.5
4,847,620	+				+0.2
4,847,620	+				+0.5
4,847,620	+				+0.9
4,847,620	+				-2.2
4,847,621	-				-1.8
4,847,621	-				-2.2
4,847,621	-				-1.1
4,847,621	-				-0.4
4,847,621	-				-0.1
4,847,621	-				+0.5
4,847,621	-				-1.7
4,847,624	+				-1.4
4,847,624	+				-1.9
4,847,624	+				-1.5
4,847,625	-				-2.1
4,847,625	-				-1.4
4,847,625	-				-0.7
4,847,625	-				-1.6
4,847,625	-				-0.9
4,847,627	+				-0.2
4,847,628	-				+0.5
4,847,628	-				+0.1
4,847,628	-				-0.2
4,847,670	+				-1.8
4,847,670	+				-1.1
4,847,671	-				-1.6
4,847,671	-				+1.1
4,847,764	+				-0.5
4,847,765	-				-0.7
4,847,765	-				-0.5
4,847,765	-				-2.0
4,847,801	+				+0.1
4,847,905	+		AO353_22125	0.13	-1.1
4,847,905	+		AO353_22125	0.13	-1.2
4,847,905	+		AO353_22125	0.13	-1.5
4,847,905	+		AO353_22125	0.13	+0.8
4,847,905	+		AO353_22125	0.13	-3.1
4,847,905	+		AO353_22125	0.13	-0.5
4,847,905	+		AO353_22125	0.13	+2.1
4,847,905	+		AO353_22125	0.13	-2.0
4,847,905	+		AO353_22125	0.13	-1.3
4,847,905	+		AO353_22125	0.13	-1.8
4,847,905	+		AO353_22125	0.13	-1.9
4,847,905	+		AO353_22125	0.13	+0.1
4,847,905	+		AO353_22125	0.13	-1.6
4,847,905	+		AO353_22125	0.13	+1.3
4,847,905	+		AO353_22125	0.13	-1.6
4,847,905	+		AO353_22125	0.13	-1.4
4,847,906	-		AO353_22125	0.13	+0.1
4,847,906	-		AO353_22125	0.13	-0.8
4,847,906	-		AO353_22125	0.13	-0.9
4,847,906	-		AO353_22125	0.13	-1.3
4,847,906	-		AO353_22125	0.13	+0.5
4,847,906	-		AO353_22125	0.13	-0.0
4,847,906	-		AO353_22125	0.13	-1.1
4,847,906	-		AO353_22125	0.13	-0.9
4,847,906	-		AO353_22125	0.13	-0.7
4,847,906	-		AO353_22125	0.13	-2.2
4,847,906	-		AO353_22125	0.13	-2.2
4,847,906	-		AO353_22125	0.13	+0.1
4,847,906	-		AO353_22125	0.13	-2.3
4,847,986	+		AO353_22125	0.17	-0.5
4,847,986	+		AO353_22125	0.17	-1.3
4,847,987	-		AO353_22125	0.17	-0.6
4,848,085	+		AO353_22125	0.22	-0.9
4,848,085	+		AO353_22125	0.22	+0.5
4,848,086	-		AO353_22125	0.22	+1.1
4,848,086	-		AO353_22125	0.22	+0.1
4,848,086	-		AO353_22125	0.22	-1.6
4,848,103	+		AO353_22125	0.23	-1.3
4,848,103	+		AO353_22125	0.23	+1.1
4,848,103	+		AO353_22125	0.23	-0.1
4,848,103	+		AO353_22125	0.23	-1.3
4,848,103	+		AO353_22125	0.23	-0.5
4,848,104	-		AO353_22125	0.23	-1.3
4,848,104	-		AO353_22125	0.23	-1.1
4,848,104	-		AO353_22125	0.23	-1.3
4,848,149	+		AO353_22125	0.25	-2.1
4,848,149	+		AO353_22125	0.25	-1.1
4,848,149	+		AO353_22125	0.25	-2.0
4,848,149	+		AO353_22125	0.25	-1.3
4,848,149	+		AO353_22125	0.25	+1.7
4,848,149	+		AO353_22125	0.25	+0.1
4,848,149	+		AO353_22125	0.25	-1.1
4,848,149	+		AO353_22125	0.25	-0.9
4,848,149	+		AO353_22125	0.25	-0.5
4,848,149	+		AO353_22125	0.25	-0.3
4,848,149	+		AO353_22125	0.25	+0.1
4,848,149	+		AO353_22125	0.25	-0.3
4,848,149	+		AO353_22125	0.25	-0.4
4,848,149	+		AO353_22125	0.25	-0.4
4,848,149	+		AO353_22125	0.25	+0.5
4,848,149	+		AO353_22125	0.25	-0.3
4,848,149	+		AO353_22125	0.25	-2.2
4,848,149	+		AO353_22125	0.25	-0.1
4,848,149	+		AO353_22125	0.25	-0.7
4,848,150	-		AO353_22125	0.25	-1.7
4,848,150	-		AO353_22125	0.25	-1.6
4,848,150	-		AO353_22125	0.25	-1.1
4,848,150	-		AO353_22125	0.25	-0.9
4,848,150	-		AO353_22125	0.25	-1.1
4,848,150	-		AO353_22125	0.25	-1.3
4,848,150	-		AO353_22125	0.25	-1.1
4,848,150	-		AO353_22125	0.25	-2.5
4,848,219	+		AO353_22125	0.29	-2.1
4,848,219	+		AO353_22125	0.29	-0.9
4,848,220	-		AO353_22125	0.29	-0.3
4,848,220	-		AO353_22125	0.29	-1.7
4,848,349	-		AO353_22125	0.35	-0.3
4,848,352	+		AO353_22125	0.35	-1.1
4,848,353	-		AO353_22125	0.35	+0.3
4,848,364	+		AO353_22125	0.36	-2.7
4,848,364	+		AO353_22125	0.36	-1.7
4,848,365	-		AO353_22125	0.36	-0.7
4,848,365	-		AO353_22125	0.36	-0.3
4,848,365	-		AO353_22125	0.36	+0.5
4,848,388	+		AO353_22125	0.37	-0.5
4,848,388	+		AO353_22125	0.37	-0.3
4,848,388	+		AO353_22125	0.37	+2.1
4,848,424	+		AO353_22125	0.39	-1.6
4,848,424	+		AO353_22125	0.39	-1.4
4,848,424	+		AO353_22125	0.39	-0.9
4,848,425	-		AO353_22125	0.39	+2.1
4,848,425	-		AO353_22125	0.39	-0.7
4,848,425	-		AO353_22125	0.39	-2.1
4,848,425	-		AO353_22125	0.39	+0.5
4,848,425	-		AO353_22125	0.39	-1.6
4,848,425	-		AO353_22125	0.39	-1.8
4,848,425	-		AO353_22125	0.39	-1.3
4,848,595	+		AO353_22125	0.47	+0.3
4,848,595	+		AO353_22125	0.47	-0.6
4,848,596	-		AO353_22125	0.47	-1.3
4,848,639	+		AO353_22125	0.50	-0.9
4,848,640	-		AO353_22125	0.50	-1.3
4,848,640	-		AO353_22125	0.50	-1.6
4,848,658	+		AO353_22125	0.50	-0.3
4,848,658	+		AO353_22125	0.50	-0.9
4,848,658	+		AO353_22125	0.50	+0.5
4,848,659	-		AO353_22125	0.50	-2.3
4,848,659	-		AO353_22125	0.50	-1.1
4,848,739	+		AO353_22125	0.54	+1.5
4,848,815	+		AO353_22125	0.58	+1.5
4,848,815	+		AO353_22125	0.58	-0.9
4,848,815	+		AO353_22125	0.58	-1.0
4,848,815	+		AO353_22125	0.58	-0.0
4,848,816	-		AO353_22125	0.58	+0.5
4,848,816	-		AO353_22125	0.58	-0.3
4,848,882	-		AO353_22125	0.62	+0.1
4,848,882	-		AO353_22125	0.62	+0.1
4,848,892	-		AO353_22125	0.62	+1.1
4,848,892	-		AO353_22125	0.62	+1.3
4,848,910	+		AO353_22125	0.63	+0.1
4,848,910	+		AO353_22125	0.63	+2.1
4,848,910	+		AO353_22125	0.63	-3.1
4,848,910	+		AO353_22125	0.63	+0.5
4,848,911	-		AO353_22125	0.63	-0.9
4,849,031	-		AO353_22125	0.69	-0.5
4,849,231	+		AO353_22125	0.79	-1.1
4,849,231	+		AO353_22125	0.79	+0.1
4,849,231	+		AO353_22125	0.79	-0.6
4,849,232	-		AO353_22125	0.79	-0.0
4,849,232	-		AO353_22125	0.79	-0.9
4,849,267	+		AO353_22125	0.81	-2.9
4,849,336	+		AO353_22125	0.84	+0.1
4,849,339	+		AO353_22125	0.84	-1.6
4,849,340	-		AO353_22125	0.84	+3.1
4,849,423	+		AO353_22125	0.88	-0.5
4,849,423	+		AO353_22125	0.88	+0.5
4,849,424	-		AO353_22125	0.88	-1.8
4,849,424	-		AO353_22125	0.88	-2.4
4,849,424	-		AO353_22125	0.88	-0.1
4,849,450	+		AO353_22125	0.90	-0.3
4,849,450	+		AO353_22125	0.90	-1.4
4,849,450	+		AO353_22125	0.90	-0.9
4,849,450	+		AO353_22125	0.90	-0.9
4,849,451	-		AO353_22125	0.90	-1.6
4,849,451	-		AO353_22125	0.90	+0.1
4,849,451	-		AO353_22125	0.90	+0.2
4,849,451	-		AO353_22125	0.90	+0.1
4,849,451	-		AO353_22125	0.90	-1.1
4,849,451	-		AO353_22125	0.90	-0.7
4,849,451	-		AO353_22125	0.90	-0.5
4,849,451	-		AO353_22125	0.90	-1.6
4,849,451	-		AO353_22125	0.90	+3.7
4,849,451	-		AO353_22125	0.90	-1.4
4,849,451	-		AO353_22125	0.90	-2.3
4,849,451	-		AO353_22125	0.90	+0.5
4,849,451	-		AO353_22125	0.90	-0.3
4,849,451	-		AO353_22125	0.90	+0.1
4,849,573	+				-0.3
4,849,574	-				-2.4
4,849,574	-				-0.5
4,849,791	-		AO353_22130	0.61	-1.1
4,849,962	-		AO353_22135	0.16	-0.7
4,850,300	+		AO353_22135	0.64	-0.7
4,850,301	-		AO353_22135	0.64	+1.1
4,850,301	-		AO353_22135	0.64	-0.9
4,850,301	-		AO353_22135	0.64	-1.9
4,850,301	-		AO353_22135	0.64	+0.1
4,850,324	+		AO353_22135	0.68	-1.3
4,850,325	-		AO353_22135	0.68	-0.7
4,850,622	+				-1.5
4,850,623	-				-1.7
4,850,623	-				-0.1