Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22120

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,845,583	+		AO353_22115	0.26	+2.7
4,845,584	-		AO353_22115	0.26	+2.1
4,845,584	-		AO353_22115	0.26	-1.6
4,845,787	+				+0.5
4,845,790	+		AO353_22115	0.47	-1.5
4,845,964	+		AO353_22115	0.65	-0.3
4,846,028	+		AO353_22115	0.72	+0.5
4,846,029	-		AO353_22115	0.72	+0.5
4,846,029	-		AO353_22115	0.72	+0.1
4,846,078	-		AO353_22115	0.77	-2.1
4,846,078	-		AO353_22115	0.77	+0.2
4,846,220	-				+0.1
4,846,220	-				+0.5
4,846,365	-				-0.5
4,846,365	-				+2.1
4,846,409	+				-0.5
4,846,409	+				-0.1
4,846,409	+				-0.9
4,846,410	-				-0.2
4,846,854	-		AO353_22120	0.54	+0.1
4,846,854	-		AO353_22120	0.54	-0.4
4,847,021	+		AO353_22120	0.70	-1.0
4,847,021	+		AO353_22120	0.70	-1.4
4,847,022	-		AO353_22120	0.70	+0.5
4,847,022	-		AO353_22120	0.70	+1.1
4,847,022	-		AO353_22120	0.70	-1.4
4,847,022	-		AO353_22120	0.70	+0.5
4,847,166	+		AO353_22120	0.85	-0.7
4,847,166	+		AO353_22120	0.85	-0.9
4,847,167	-		AO353_22120	0.85	-0.7
4,847,175	+		AO353_22120	0.86	-1.9
4,847,176	-		AO353_22120	0.86	-1.0
4,847,405	+				-0.2
4,847,429	+				-0.6
4,847,429	+				+0.1
4,847,442	-				-1.1
4,847,442	-				+0.8
4,847,609	-				+2.1
4,847,618	+				-1.2
4,847,618	+				-1.7
4,847,618	+				+0.5
4,847,618	+				+0.5
4,847,619	-				-0.4
4,847,619	-				-2.6
4,847,619	-				-0.5
4,847,619	-				-2.5
4,847,620	+				-1.6
4,847,620	+				+0.8
4,847,620	+				-1.7
4,847,620	+				+0.5
4,847,620	+				+0.2
4,847,620	+				+0.5
4,847,620	+				+0.9
4,847,620	+				-2.2
4,847,621	-				-1.8
4,847,621	-				-2.2
4,847,621	-				-1.1
4,847,621	-				-0.4
4,847,621	-				-0.1
4,847,621	-				+0.5
4,847,621	-				-1.7
4,847,624	+				-1.4
4,847,624	+				-1.9
4,847,624	+				-1.5
4,847,625	-				-2.1
4,847,625	-				-1.4
4,847,625	-				-0.7
4,847,625	-				-1.6
4,847,625	-				-0.9
4,847,627	+				-0.2
4,847,628	-				+0.5
4,847,628	-				+0.1
4,847,628	-				-0.2
4,847,670	+				-1.8
4,847,670	+				-1.1
4,847,671	-				-1.6
4,847,671	-				+1.1
4,847,764	+				-0.5
4,847,765	-				-0.7
4,847,765	-				-0.5
4,847,765	-				-2.0
4,847,801	+				+0.1
4,847,905	+		AO353_22125	0.13	-1.1
4,847,905	+		AO353_22125	0.13	-1.2
4,847,905	+		AO353_22125	0.13	-1.5
4,847,905	+		AO353_22125	0.13	+0.8
4,847,905	+		AO353_22125	0.13	-3.1
4,847,905	+		AO353_22125	0.13	-0.5
4,847,905	+		AO353_22125	0.13	+2.1
4,847,905	+		AO353_22125	0.13	-2.0
4,847,905	+		AO353_22125	0.13	-1.3
4,847,905	+		AO353_22125	0.13	-1.8
4,847,905	+		AO353_22125	0.13	-1.9
4,847,905	+		AO353_22125	0.13	+0.1
4,847,905	+		AO353_22125	0.13	-1.6
4,847,905	+		AO353_22125	0.13	+1.3
4,847,905	+		AO353_22125	0.13	-1.6
4,847,905	+		AO353_22125	0.13	-1.4
4,847,906	-		AO353_22125	0.13	+0.1
4,847,906	-		AO353_22125	0.13	-0.8
4,847,906	-		AO353_22125	0.13	-0.9
4,847,906	-		AO353_22125	0.13	-1.3
4,847,906	-		AO353_22125	0.13	+0.5
4,847,906	-		AO353_22125	0.13	-0.0
4,847,906	-		AO353_22125	0.13	-1.1
4,847,906	-		AO353_22125	0.13	-0.9
4,847,906	-		AO353_22125	0.13	-0.7
4,847,906	-		AO353_22125	0.13	-2.2
4,847,906	-		AO353_22125	0.13	-2.2
4,847,906	-		AO353_22125	0.13	+0.1
4,847,906	-		AO353_22125	0.13	-2.3
4,847,986	+		AO353_22125	0.17	-0.5
4,847,986	+		AO353_22125	0.17	-1.3
4,847,987	-		AO353_22125	0.17	-0.6
4,848,085	+		AO353_22125	0.22	-0.9
4,848,085	+		AO353_22125	0.22	+0.5
4,848,086	-		AO353_22125	0.22	+1.1
4,848,086	-		AO353_22125	0.22	+0.1
4,848,086	-		AO353_22125	0.22	-1.6
4,848,103	+		AO353_22125	0.23	-1.3
4,848,103	+		AO353_22125	0.23	+1.1
4,848,103	+		AO353_22125	0.23	-0.1
4,848,103	+		AO353_22125	0.23	-1.3
4,848,103	+		AO353_22125	0.23	-0.5
4,848,104	-		AO353_22125	0.23	-1.3
4,848,104	-		AO353_22125	0.23	-1.1
4,848,104	-		AO353_22125	0.23	-1.3
4,848,149	+		AO353_22125	0.25	-2.1
4,848,149	+		AO353_22125	0.25	-1.1
4,848,149	+		AO353_22125	0.25	-2.0
4,848,149	+		AO353_22125	0.25	-1.3
4,848,149	+		AO353_22125	0.25	+1.7
4,848,149	+		AO353_22125	0.25	+0.1
4,848,149	+		AO353_22125	0.25	-1.1
4,848,149	+		AO353_22125	0.25	-0.9
4,848,149	+		AO353_22125	0.25	-0.5
4,848,149	+		AO353_22125	0.25	-0.3
4,848,149	+		AO353_22125	0.25	+0.1
4,848,149	+		AO353_22125	0.25	-0.3
4,848,149	+		AO353_22125	0.25	-0.4
4,848,149	+		AO353_22125	0.25	-0.4
4,848,149	+		AO353_22125	0.25	+0.5
4,848,149	+		AO353_22125	0.25	-0.3
4,848,149	+		AO353_22125	0.25	-2.2
4,848,149	+		AO353_22125	0.25	-0.1
4,848,149	+		AO353_22125	0.25	-0.7
4,848,150	-		AO353_22125	0.25	-1.7
4,848,150	-		AO353_22125	0.25	-1.6
4,848,150	-		AO353_22125	0.25	-1.1
4,848,150	-		AO353_22125	0.25	-0.9
4,848,150	-		AO353_22125	0.25	-1.1
4,848,150	-		AO353_22125	0.25	-1.3
4,848,150	-		AO353_22125	0.25	-1.1
4,848,150	-		AO353_22125	0.25	-2.5
4,848,219	+		AO353_22125	0.29	-2.1
4,848,219	+		AO353_22125	0.29	-0.9
4,848,220	-		AO353_22125	0.29	-0.3
4,848,220	-		AO353_22125	0.29	-1.7