Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21965

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,811,427	+		AO353_21955	0.47	-1.2
4,811,427	+		AO353_21955	0.47	+0.3
4,811,427	+		AO353_21955	0.47	+1.1
4,811,427	+		AO353_21955	0.47	+0.8
4,811,427	+		AO353_21955	0.47	-1.0
4,811,427	+		AO353_21955	0.47	+2.5
4,811,427	+		AO353_21955	0.47	+1.1
4,811,427	+		AO353_21955	0.47	-0.5
4,811,427	+		AO353_21955	0.47	+1.1
4,811,427	+		AO353_21955	0.47	-2.1
4,811,427	+		AO353_21955	0.47	-1.1
4,811,427	+		AO353_21955	0.47	+0.1
4,811,428	-		AO353_21955	0.47	+0.1
4,811,428	-		AO353_21955	0.47	+0.5
4,811,428	-		AO353_21955	0.47	+1.1
4,811,428	-		AO353_21955	0.47	-0.1
4,811,428	-		AO353_21955	0.47	+1.5
4,811,428	-		AO353_21955	0.47	-0.4
4,811,428	-		AO353_21955	0.47	+2.1
4,811,428	-		AO353_21955	0.47	+0.3
4,811,430	+		AO353_21955	0.47	-1.5
4,811,446	+				+1.1
4,811,447	-		AO353_21955	0.49	-0.7
4,811,460	+		AO353_21955	0.50	-1.2
4,811,460	+		AO353_21955	0.50	+1.1
4,811,460	+		AO353_21955	0.50	-1.1
4,811,461	-		AO353_21955	0.50	+0.5
4,811,461	-		AO353_21955	0.50	+0.1
4,811,461	-		AO353_21955	0.50	+0.1
4,811,461	-		AO353_21955	0.50	+0.1
4,811,461	-		AO353_21955	0.50	-0.4
4,811,672	+		AO353_21955	0.68	-0.8
4,811,673	-		AO353_21955	0.68	+0.8
4,811,694	+		AO353_21955	0.70	-0.7
4,811,694	+		AO353_21955	0.70	-0.5
4,811,694	+		AO353_21955	0.70	+0.1
4,811,694	+		AO353_21955	0.70	+0.2
4,811,694	+		AO353_21955	0.70	+0.1
4,811,694	+		AO353_21955	0.70	+0.1
4,811,694	+		AO353_21955	0.70	+1.1
4,811,694	+		AO353_21955	0.70	+3.1
4,811,694	+		AO353_21955	0.70	-1.4
4,811,694	+		AO353_21955	0.70	-0.5
4,811,695	-		AO353_21955	0.70	+0.5
4,811,695	-		AO353_21955	0.70	-0.2
4,811,695	-		AO353_21955	0.70	-0.4
4,811,695	-		AO353_21955	0.70	+1.4
4,811,695	-		AO353_21955	0.70	-1.0
4,811,695	-		AO353_21955	0.70	-1.8
4,811,695	-		AO353_21955	0.70	-0.4
4,811,695	-		AO353_21955	0.70	-0.7
4,811,695	-		AO353_21955	0.70	+1.7
4,811,695	-		AO353_21955	0.70	-2.2
4,811,767	+		AO353_21955	0.76	+0.1
4,811,829	+		AO353_21955	0.81	-0.2
4,811,829	+		AO353_21955	0.81	-1.2
4,811,829	+		AO353_21955	0.81	-1.1
4,811,829	+		AO353_21955	0.81	-1.1
4,811,829	+		AO353_21955	0.81	-1.1
4,811,829	+		AO353_21955	0.81	+2.5
4,811,829	+		AO353_21955	0.81	+2.1
4,811,829	+		AO353_21955	0.81	+0.1
4,811,829	+		AO353_21955	0.81	-1.4
4,811,829	+		AO353_21955	0.81	-0.4
4,811,830	-		AO353_21955	0.81	-2.4
4,811,830	-		AO353_21955	0.81	-0.7
4,811,830	-		AO353_21955	0.81	-0.1
4,811,830	-		AO353_21955	0.81	+0.1
4,811,830	-		AO353_21955	0.81	-1.6
4,811,830	-		AO353_21955	0.81	-0.2
4,811,830	-		AO353_21955	0.81	-1.3
4,811,830	-		AO353_21955	0.81	+0.1
4,811,830	-		AO353_21955	0.81	+1.2
4,811,830	-		AO353_21955	0.81	+2.1
4,811,830	-		AO353_21955	0.81	+1.6
4,811,830	-		AO353_21955	0.81	+1.1
4,811,830	-		AO353_21955	0.81	-0.9
4,811,933	+		AO353_21955	0.90	-0.5
4,811,934	-		AO353_21955	0.90	+0.4
4,811,934	-		AO353_21955	0.90	-1.7
4,811,934	-		AO353_21955	0.90	+0.3
4,811,934	-		AO353_21955	0.90	-1.4
4,811,960	+				-0.2
4,811,960	+				+1.8
4,811,961	-				-1.2
4,811,961	-				-0.7
4,812,393	+				-0.5
4,812,394	-				+0.1
4,812,505	+		AO353_21965	0.36	-1.1
4,812,552	-		AO353_21965	0.51	+0.1
4,812,735	+				-0.5
4,812,736	-				-1.3
4,812,736	-				+1.8
4,812,756	+				-2.0
4,812,756	+				-1.9
4,812,756	+				-1.2
4,812,757	-				-0.3
4,812,757	-				-1.2
4,812,757	-				+0.8
4,812,782	-				-0.6
4,812,906	+		AO353_21970	0.10	-1.4
4,812,906	+				+2.1
4,812,907	-		AO353_21970	0.10	-0.7
4,812,907	-		AO353_21970	0.10	-0.7
4,812,907	-		AO353_21970	0.10	+0.5
4,812,918	-		AO353_21970	0.11	-0.9
4,812,918	-		AO353_21970	0.11	+0.1
4,812,918	-		AO353_21970	0.11	-1.1
4,812,918	-		AO353_21970	0.11	-0.9
4,812,951	+		AO353_21970	0.13	-0.9
4,813,056	+		AO353_21970	0.19	+0.9
4,813,056	+		AO353_21970	0.19	+0.1
4,813,056	+		AO353_21970	0.19	-1.0
4,813,056	+		AO353_21970	0.19	-0.1
4,813,057	-		AO353_21970	0.19	-1.5
4,813,057	-		AO353_21970	0.19	-0.1
4,813,057	-		AO353_21970	0.19	-0.7
4,813,057	-		AO353_21970	0.19	+1.1
4,813,140	+		AO353_21970	0.24	+0.8
4,813,141	-		AO353_21970	0.24	-0.9
4,813,141	-		AO353_21970	0.24	-1.8
4,813,141	-		AO353_21970	0.24	-0.5
4,813,141	-		AO353_21970	0.24	-0.5
4,813,353	+		AO353_21970	0.37	+0.8
4,813,354	-		AO353_21970	0.37	+1.7
4,813,407	+		AO353_21970	0.40	-1.2
4,813,407	+		AO353_21970	0.40	-1.5
4,813,407	+		AO353_21970	0.40	-1.2
4,813,407	+		AO353_21970	0.40	-1.2
4,813,407	+		AO353_21970	0.40	-1.3
4,813,408	-		AO353_21970	0.40	-1.1
4,813,408	-		AO353_21970	0.40	-0.5
4,813,408	-		AO353_21970	0.40	-0.1
4,813,408	-		AO353_21970	0.40	-0.1
4,813,408	-		AO353_21970	0.40	+0.3
4,813,408	-		AO353_21970	0.40	-1.2
4,813,408	-		AO353_21970	0.40	-0.7
4,813,408	-		AO353_21970	0.40	-0.4
4,813,408	-		AO353_21970	0.40	+0.0
4,813,408	-		AO353_21970	0.40	+0.1
4,813,437	+		AO353_21970	0.42	+0.1
4,813,437	+		AO353_21970	0.42	-0.7
4,813,536	+		AO353_21970	0.48	-1.0
4,813,536	+		AO353_21970	0.48	+1.3
4,813,536	+		AO353_21970	0.48	+0.1
4,813,629	+		AO353_21970	0.53	-0.2
4,813,630	-		AO353_21970	0.53	-0.9
4,813,647	+		AO353_21970	0.54	-0.7
4,813,647	+		AO353_21970	0.54	-1.3
4,813,647	+		AO353_21970	0.54	-0.7
4,813,647	+		AO353_21970	0.54	+0.8
4,813,647	+		AO353_21970	0.54	-1.2
4,813,647	+		AO353_21970	0.54	-0.7
4,813,648	-		AO353_21970	0.54	+1.1
4,813,648	-		AO353_21970	0.54	-0.5
4,813,648	-				+1.1
4,813,648	-		AO353_21970	0.54	-0.7
4,813,648	-		AO353_21970	0.54	-2.4
4,813,648	-		AO353_21970	0.54	-0.4
4,813,648	-		AO353_21970	0.54	-2.1
4,813,648	-		AO353_21970	0.54	-0.5
4,813,648	-		AO353_21970	0.54	+0.5
4,813,648	-		AO353_21970	0.54	+1.1
4,813,648	-		AO353_21970	0.54	+0.5
4,813,648	-		AO353_21970	0.54	-0.9