Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21655

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,745,404	+		AO353_21645	0.43	-0.5
4,745,404	+		AO353_21645	0.43	+1.6
4,745,404	+		AO353_21645	0.43	+1.3
4,745,404	+		AO353_21645	0.43	+0.1
4,745,404	+		AO353_21645	0.43	+1.7
4,745,404	+		AO353_21645	0.43	+3.6
4,745,404	+		AO353_21645	0.43	+1.1
4,745,405	-		AO353_21645	0.43	-0.3
4,745,405	-		AO353_21645	0.43	+0.1
4,745,556	+				+0.7
4,745,556	+				+0.9
4,745,556	+				+1.5
4,745,556	+				+0.2
4,745,557	-				-0.9
4,745,557	-				-1.0
4,745,557	-				+0.6
4,745,557	-				-2.3
4,745,557	-				+0.5
4,745,557	-				+1.5
4,745,616	+				+0.1
4,745,617	-				-1.3
4,745,774	+				-0.5
4,745,774	+				+2.1
4,745,774	+				-0.3
4,745,825	-				-1.9
4,745,836	+				+0.3
4,745,836	+				-1.1
4,745,837	-				-0.5
4,745,837	-				-0.5
4,745,837	-				-0.2
4,745,963	+		AO353_21650	0.53	-0.5
4,745,964	-		AO353_21650	0.54	+2.5
4,746,106	+				+0.5
4,746,106	+				+1.1
4,746,106	+				+0.6
4,746,106	+				-0.8
4,746,106	+				+0.2
4,746,107	-				-0.9
4,746,107	-				+0.9
4,746,107	-				-1.3
4,746,107	-				-0.5
4,746,107	-				+1.1
4,746,107	-				-0.1
4,746,275	+				+0.6
4,746,275	+				+1.2
4,746,276	-				-0.5
4,746,276	-				+0.7
4,746,276	-				+2.1
4,746,343	+				+0.3
4,746,580	+		AO353_21655	0.19	-2.5
4,746,580	+		AO353_21655	0.19	+2.1
4,746,580	+		AO353_21655	0.19	-0.3
4,746,580	+		AO353_21655	0.19	-0.9
4,746,581	-		AO353_21655	0.19	-1.3
4,746,581	-		AO353_21655	0.19	-2.2
4,746,581	-		AO353_21655	0.19	-0.7
4,747,595	-				-1.3
4,747,654	+				+3.1
4,747,654	+				-0.5
4,747,654	+				+0.1
4,747,654	+				+2.1
4,747,654	+				-0.4
4,747,654	+				-0.4
4,747,654	+				-0.1
4,747,654	+				+0.1
4,747,654	+				-1.4
4,747,655	-				+0.5
4,747,655	-				+1.1
4,747,655	-				+0.1
4,747,655	-				+0.4
4,747,655	-				-1.6
4,747,655	-				-0.4
4,747,655	-				+0.1
4,747,655	-				+0.3
4,747,655	-				+0.5
4,747,655	-				+0.3
4,747,655	-				+0.3
4,747,717	+				-0.7
4,747,824	+		AO353_21660	0.10	+0.3
4,747,824	+		AO353_21660	0.10	+0.5
4,747,824	+		AO353_21660	0.10	-0.7
4,747,824	+		AO353_21660	0.10	+0.1
4,747,900	+		AO353_21660	0.12	-0.7
4,747,901	-		AO353_21660	0.12	+0.3
4,747,978	+		AO353_21660	0.14	+0.5
4,747,978	+		AO353_21660	0.14	+0.1
4,747,979	-		AO353_21660	0.14	+1.5
4,747,979	-		AO353_21660	0.14	+3.6