Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20635

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,525,436	+				-1.3
4,525,437	-				-0.1
4,525,437	-				-0.0
4,525,443	+				-1.7
4,525,501	+				-0.5
4,525,501	+				-0.4
4,525,501	+				-0.0
4,525,502	-				+1.6
4,525,502	-				-0.0
4,525,502	-				-0.6
4,525,502	-				-1.4
4,525,502	-				+0.6
4,525,502	-				-0.0
4,525,598	+				-1.0
4,525,598	+				-1.0
4,525,598	+				-0.0
4,525,598	+				-0.0
4,525,598	+				+0.4
4,525,598	+				+0.6
4,525,599	-				+1.0
4,525,599	-				-1.0
4,525,599	-				+1.6
4,525,601	+				-0.5
4,525,601	+				-0.6
4,525,601	+				-0.0
4,525,602	-				-1.6
4,525,602	-				-1.4
4,525,602	-				-1.6
4,525,602	-				-2.4
4,525,602	-				+0.4
4,525,602	-				-0.0
4,525,602	-				-0.6
4,525,649	+		AO353_20630	0.10	-0.1
4,525,649	+		AO353_20630	0.10	-0.5
4,525,649	+		AO353_20630	0.10	-0.4
4,525,650	-		AO353_20630	0.10	-3.2
4,525,650	-		AO353_20630	0.10	-1.5
4,525,650	-		AO353_20630	0.10	+1.2
4,525,650	-		AO353_20630	0.10	-1.2
4,525,679	+		AO353_20630	0.14	+2.0
4,525,679	+		AO353_20630	0.14	+1.1
4,525,786	+		AO353_20630	0.28	-1.2
4,525,786	+		AO353_20630	0.28	-0.7
4,525,787	-		AO353_20630	0.28	-0.4
4,525,787	-		AO353_20630	0.28	+1.0
4,525,787	-		AO353_20630	0.28	-2.3
4,525,817	+		AO353_20630	0.32	-1.3
4,525,817	+		AO353_20630	0.32	+0.4
4,525,817	+		AO353_20630	0.32	-1.4
4,525,817	+		AO353_20630	0.32	-1.3
4,525,817	+		AO353_20630	0.32	-0.1
4,525,818	-		AO353_20630	0.32	-0.1
4,526,003	+		AO353_20630	0.56	-0.8
4,526,003	+		AO353_20630	0.56	+1.3
4,526,003	+		AO353_20630	0.56	+0.5
4,526,003	+		AO353_20630	0.56	+0.4
4,526,003	+		AO353_20630	0.56	+1.0
4,526,003	+		AO353_20630	0.56	-0.4
4,526,003	+		AO353_20630	0.56	-0.9
4,526,003	+		AO353_20630	0.56	+0.4
4,526,003	+		AO353_20630	0.56	+0.6
4,526,003	+		AO353_20630	0.56	-0.5
4,526,003	+		AO353_20630	0.56	+0.4
4,526,004	-		AO353_20630	0.57	+1.4
4,526,004	-		AO353_20630	0.57	-0.5
4,526,004	-		AO353_20630	0.57	-1.0
4,526,004	-		AO353_20630	0.57	+2.0
4,526,004	-		AO353_20630	0.57	-0.4
4,526,004	-		AO353_20630	0.57	-0.4
4,526,004	-		AO353_20630	0.57	-1.7
4,526,004	-		AO353_20630	0.57	-1.8
4,526,004	-		AO353_20630	0.57	-1.0
4,526,004	-		AO353_20630	0.57	-0.4
4,526,004	-		AO353_20630	0.57	-0.4
4,526,007	+		AO353_20630	0.57	-1.5
4,526,007	+		AO353_20630	0.57	+1.2
4,526,007	+		AO353_20630	0.57	+1.1
4,526,007	+		AO353_20630	0.57	+0.2
4,526,007	+		AO353_20630	0.57	+1.1
4,526,008	-		AO353_20630	0.57	+0.2
4,526,008	-		AO353_20630	0.57	-1.6
4,526,008	-		AO353_20630	0.57	-0.6
4,526,008	-		AO353_20630	0.57	+0.2
4,526,008	-		AO353_20630	0.57	-1.7
4,526,008	-		AO353_20630	0.57	+1.0
4,526,008	-		AO353_20630	0.57	-1.0
4,526,008	-		AO353_20630	0.57	+2.0
4,526,008	-		AO353_20630	0.57	+1.0
4,526,008	-		AO353_20630	0.57	-0.8
4,526,008	-		AO353_20630	0.57	-1.4
4,526,047	+		AO353_20630	0.62	-0.8
4,526,047	+		AO353_20630	0.62	-1.0
4,526,048	-		AO353_20630	0.62	-0.4
4,526,048	-		AO353_20630	0.62	-1.6
4,526,067	-		AO353_20630	0.65	-0.5
4,526,067	-		AO353_20630	0.65	+0.6
4,526,095	+		AO353_20630	0.68	+1.0
4,526,095	+		AO353_20630	0.68	-0.1
4,526,096	-		AO353_20630	0.68	-0.2
4,526,142	+		AO353_20630	0.74	-0.0
4,526,149	-		AO353_20630	0.75	-1.1
4,526,149	-		AO353_20630	0.75	-1.2
4,526,179	+		AO353_20630	0.79	-0.1
4,526,179	+		AO353_20630	0.79	-0.1
4,526,179	+		AO353_20630	0.79	+1.6
4,526,180	-		AO353_20630	0.79	-1.0
4,526,180	-		AO353_20630	0.79	+0.1
4,526,180	-		AO353_20630	0.79	-0.0
4,526,180	-		AO353_20630	0.79	-0.6
4,526,205	+		AO353_20630	0.83	-0.7
4,526,205	+		AO353_20630	0.83	-1.0
4,526,205	+		AO353_20630	0.83	-0.8
4,526,205	+		AO353_20630	0.83	-0.3
4,526,206	-		AO353_20630	0.83	-0.6
4,526,206	-		AO353_20630	0.83	-0.9
4,526,206	-		AO353_20630	0.83	-0.8
4,526,206	-		AO353_20630	0.83	+1.6
4,526,206	-		AO353_20630	0.83	-0.7
4,526,206	-		AO353_20630	0.83	-0.2
4,526,206	-		AO353_20630	0.83	-0.4
4,526,273	-				-1.0
4,526,273	-				+0.4
4,526,273	-				-1.1
4,526,819	+		AO353_20635	0.38	+2.0
4,526,819	+		AO353_20635	0.38	-0.2
4,526,820	-		AO353_20635	0.39	-0.8
4,526,820	-		AO353_20635	0.39	+0.6
4,526,823	+		AO353_20635	0.39	-2.6
4,526,823	+		AO353_20635	0.39	-2.3
4,526,823	+		AO353_20635	0.39	-1.9
4,526,823	+		AO353_20635	0.39	-0.8
4,526,823	+		AO353_20635	0.39	-1.4
4,526,823	+		AO353_20635	0.39	-1.5
4,526,824	-		AO353_20635	0.39	+0.4
4,526,824	-		AO353_20635	0.39	+0.4
4,526,824	-		AO353_20635	0.39	+3.0
4,526,824	-		AO353_20635	0.39	+0.4
4,526,824	-		AO353_20635	0.39	-2.4
4,526,824	-		AO353_20635	0.39	+0.4
4,526,824	-		AO353_20635	0.39	-0.4
4,526,877	+		AO353_20635	0.44	-1.8
4,526,877	+		AO353_20635	0.44	-2.5
4,526,878	-		AO353_20635	0.44	-0.8
4,526,878	-		AO353_20635	0.44	-0.0
4,526,892	+		AO353_20635	0.45	-0.2
4,526,892	+		AO353_20635	0.45	-1.5
4,526,892	+		AO353_20635	0.45	-1.0
4,526,892	+		AO353_20635	0.45	-1.0
4,526,892	+		AO353_20635	0.45	-1.7
4,527,066	+		AO353_20635	0.61	-1.8
4,527,066	+		AO353_20635	0.61	-0.9
4,527,066	+		AO353_20635	0.61	-2.0
4,527,066	+		AO353_20635	0.61	-1.2
4,527,066	+		AO353_20635	0.61	-1.6
4,527,066	+		AO353_20635	0.61	+3.0
4,527,066	+		AO353_20635	0.61	-2.2
4,527,066	+		AO353_20635	0.61	-1.2
4,527,066	+		AO353_20635	0.61	-1.4
4,527,066	+		AO353_20635	0.61	+1.0
4,527,066	+		AO353_20635	0.61	-0.8
4,527,066	+		AO353_20635	0.61	-3.2
4,527,066	+		AO353_20635	0.61	-0.4
4,527,066	+		AO353_20635	0.61	-1.2
4,527,066	+		AO353_20635	0.61	-0.2
4,527,066	+		AO353_20635	0.61	+2.0
4,527,066	+		AO353_20635	0.61	-1.6
4,527,066	+		AO353_20635	0.61	+0.6
4,527,066	+		AO353_20635	0.61	-1.6
4,527,066	+		AO353_20635	0.61	-2.0
4,527,066	+		AO353_20635	0.61	-3.1
4,527,066	+		AO353_20635	0.61	-1.2
4,527,066	+		AO353_20635	0.61	-2.6
4,527,066	+		AO353_20635	0.61	-0.6
4,527,066	+		AO353_20635	0.61	-1.5
4,527,066	+		AO353_20635	0.61	-2.3
4,527,067	-		AO353_20635	0.61	-1.5
4,527,067	-		AO353_20635	0.61	-1.4
4,527,067	-		AO353_20635	0.61	-1.4
4,527,067	-		AO353_20635	0.61	-1.7
4,527,067	-		AO353_20635	0.61	+1.1
4,527,067	-		AO353_20635	0.61	-1.5
4,527,067	-		AO353_20635	0.61	-1.5
4,527,067	-		AO353_20635	0.61	-0.8
4,527,067	-		AO353_20635	0.61	-1.2
4,527,067	-		AO353_20635	0.61	-0.4
4,527,067	-		AO353_20635	0.61	-0.7
4,527,067	-		AO353_20635	0.61	-1.5
4,527,067	-		AO353_20635	0.61	+0.4
4,527,067	-		AO353_20635	0.61	-1.0
4,527,067	-		AO353_20635	0.61	-2.0
4,527,067	-				-0.4
4,527,067	-		AO353_20635	0.61	-2.7
4,527,067	-		AO353_20635	0.61	-1.4
4,527,067	-		AO353_20635	0.61	-0.4
4,527,067	-		AO353_20635	0.61	-1.0
4,527,067	-		AO353_20635	0.61	-1.0
4,527,221	+		AO353_20635	0.76	-1.4
4,527,221	+		AO353_20635	0.76	-2.0
4,527,222	-		AO353_20635	0.76	-1.4
4,527,231	+		AO353_20635	0.76	-0.8
4,527,231	+		AO353_20635	0.76	-0.8
4,527,231	+		AO353_20635	0.76	-0.5
4,527,231	+		AO353_20635	0.76	+0.3
4,527,231	+		AO353_20635	0.76	-0.6
4,527,231	+		AO353_20635	0.76	-2.3
4,527,232	-		AO353_20635	0.77	-0.8
4,527,232	-		AO353_20635	0.77	-0.4
4,527,232	-		AO353_20635	0.77	-0.8
4,527,232	-		AO353_20635	0.77	+0.4
4,527,232	-		AO353_20635	0.77	+3.0
4,527,433	+				-1.0
4,527,433	+				-0.8
4,527,433	+				-2.4
4,527,433	+				-1.5
4,527,434	-				+1.0
4,527,434	-				-1.5
4,527,434	-				-0.8
4,527,438	-				-1.5
4,527,483	+				-0.4