Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18745

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,121,705	+				-0.4
4,121,705	+				-0.9
4,121,706	-				-0.7
4,121,706	-				-1.2
4,121,767	+				-1.7
4,122,231	+				-1.2
4,122,231	+				+3.5
4,122,231	+				+1.1
4,122,231	+				+1.1
4,122,232	-				-1.5
4,122,232	-				+2.7
4,122,232	-				-0.4
4,122,628	+				-2.0
4,122,628	+				+1.9
4,122,629	-				-0.4
4,122,634	+				+0.3
4,122,634	+				+0.3
4,122,641	+				+0.1
4,122,641	+				-0.1
4,122,641	+				+1.3
4,122,641	+				-1.4
4,122,641	+				+0.9
4,122,641	+				-1.4
4,122,641	+				+1.5
4,122,642	-				-0.9
4,122,642	-				+1.3
4,122,642	-				-0.7
4,122,642	-				-0.9
4,122,642	-				+1.1
4,122,763	+		AO353_18745	0.16	-2.4
4,122,764	-		AO353_18745	0.16	+2.9
4,122,997	+		AO353_18745	0.47	-2.2
4,122,997	+		AO353_18745	0.47	-0.7
4,122,997	+		AO353_18745	0.47	-1.0
4,123,390	+				+1.5
4,123,391	-				-2.0
4,123,396	+				-2.1
4,123,396	+				-0.2
4,123,396	+				-0.1
4,123,396	+				-0.1
4,123,396	+				-0.1
4,123,396	+				+1.9
4,123,396	+				-0.9
4,123,396	+				-0.1
4,123,397	-				+0.2
4,123,397	-				+1.9
4,123,397	-				-0.7
4,123,397	-				-0.6
4,123,397	-				-0.6
4,123,397	-				+0.4
4,123,397	-				-0.1
4,123,397	-				+0.3
4,123,436	+				-0.7
4,123,436	+				-0.6
4,123,484	+		AO353_18750	0.25	-1.6
4,123,625	+		AO353_18750	0.77	-0.7
4,123,625	+		AO353_18750	0.77	+1.9
4,123,625	+		AO353_18750	0.77	+0.3
4,123,626	-		AO353_18750	0.77	+0.3
4,123,626	-		AO353_18750	0.77	-0.6
4,123,626	-		AO353_18750	0.77	+1.1
4,123,642	+		AO353_18750	0.83	-1.7
4,123,642	+		AO353_18750	0.83	+1.1
4,123,642	+		AO353_18750	0.83	-0.7
4,123,642	+		AO353_18750	0.83	-0.4
4,123,642	+		AO353_18750	0.83	+0.3
4,123,642	+		AO353_18750	0.83	-0.3
4,123,642	+		AO353_18750	0.83	+0.9
4,123,642	+		AO353_18750	0.83	-2.5
4,123,643	-		AO353_18750	0.84	-1.2
4,123,643	-		AO353_18750	0.84	+0.9
4,123,643	-		AO353_18750	0.84	-0.7
4,123,643	-		AO353_18750	0.84	+0.5
4,123,643	-		AO353_18750	0.84	-1.1
4,123,643	-		AO353_18750	0.84	-0.1
4,123,643	-		AO353_18750	0.84	+1.3
4,123,643	-		AO353_18750	0.84	-0.1
4,123,657	+		AO353_18750	0.89	-1.0
4,123,657	+		AO353_18750	0.89	-0.2
4,123,658	-		AO353_18750	0.89	-0.9
4,123,658	-		AO353_18750	0.89	-1.3
4,123,658	-		AO353_18750	0.89	+1.3
4,123,658	-		AO353_18750	0.89	-0.9
4,123,685	-				-1.6
4,123,725	+				+0.5
4,123,726	-				-0.9
4,123,818	+		AO353_18755	0.16	+1.4
4,123,819	-		AO353_18755	0.16	+0.3
4,123,819	-		AO353_18755	0.16	+0.1
4,123,829	-		AO353_18755	0.18	-1.6
4,123,829	-		AO353_18755	0.18	+0.1
4,123,829	-		AO353_18755	0.18	+0.3
4,123,829	-		AO353_18755	0.18	+0.4
4,123,829	-		AO353_18755	0.18	-0.4
4,123,931	+		AO353_18755	0.31	-0.8
4,123,931	+		AO353_18755	0.31	-2.8
4,123,931	+		AO353_18755	0.31	+0.7
4,123,931	+		AO353_18755	0.31	-0.7
4,123,931	+		AO353_18755	0.31	-0.9
4,123,932	-		AO353_18755	0.31	+1.5
4,123,932	-		AO353_18755	0.31	+3.9
4,123,932	-		AO353_18755	0.31	-0.2
4,124,249	+		AO353_18755	0.71	-0.1
4,124,250	-		AO353_18755	0.72	+1.3
4,124,250	-		AO353_18755	0.72	+0.5
4,124,331	+		AO353_18755	0.82	-0.6
4,124,332	-		AO353_18755	0.82	+0.3
4,124,332	-		AO353_18755	0.82	-0.5