Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18495

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
4,072,030	+		AO353_18490	0.31	-1.5
4,072,030	+		AO353_18490	0.31	-1.3
4,072,030	+		AO353_18490	0.31	-0.5
4,072,030	+		AO353_18490	0.31	-0.6
4,072,031	-		AO353_18490	0.31	+0.3
4,072,031	-		AO353_18490	0.31	+0.5
4,072,031	-		AO353_18490	0.31	-2.4
4,072,031	-		AO353_18490	0.31	-0.5
4,072,031	-		AO353_18490	0.31	+0.9
4,072,031	-		AO353_18490	0.31	+0.9
4,072,371	+		AO353_18490	0.57	-0.5
4,072,371	+		AO353_18490	0.57	-1.2
4,072,371	+		AO353_18490	0.57	-0.5
4,072,372	-		AO353_18490	0.57	-1.6
4,072,372	-		AO353_18490	0.57	-2.1
4,072,372	-		AO353_18490	0.57	-1.7
4,072,372	-		AO353_18490	0.57	+0.1
4,072,372	-		AO353_18490	0.57	-1.7
4,072,372	-		AO353_18490	0.57	-1.1
4,072,543	+		AO353_18490	0.69	+1.1
4,072,543	+		AO353_18490	0.69	-2.7
4,072,544	-		AO353_18490	0.69	-1.1
4,072,544	-		AO353_18490	0.69	+1.9
4,072,544	-		AO353_18490	0.69	-1.1
4,072,544	-		AO353_18490	0.69	-0.3
4,072,544	-		AO353_18490	0.69	-0.0
4,072,548	+		AO353_18490	0.70	-1.3
4,072,548	+		AO353_18490	0.70	+1.9
4,072,549	-		AO353_18490	0.70	-0.5
4,072,560	+		AO353_18490	0.71	-1.9
4,072,561	-		AO353_18490	0.71	-0.4
4,072,561	-		AO353_18490	0.71	+0.9
4,072,561	-		AO353_18490	0.71	-0.4
4,072,561	-		AO353_18490	0.71	+0.3
4,072,561	-		AO353_18490	0.71	+0.3
4,072,561	-		AO353_18490	0.71	-0.9
4,072,587	+		AO353_18490	0.73	-1.0
4,072,587	+		AO353_18490	0.73	-1.5
4,072,587	+		AO353_18490	0.73	-1.3
4,072,588	-		AO353_18490	0.73	+0.9
4,072,718	+		AO353_18490	0.82	-0.9
4,072,822	+				-0.9
4,072,957	+				+1.5
4,072,957	+				+1.9
4,072,958	-				+0.9
4,072,958	-				-1.9
4,072,958	-				-0.5
4,073,015	+				-0.1
4,073,016	-				+0.3
4,073,024	-				-0.2
4,073,024	-				-0.1
4,073,024	-				+1.9
4,073,230	+		AO353_18495	0.47	-0.5
4,073,230	+		AO353_18495	0.47	-0.7
4,073,230	+		AO353_18495	0.47	-0.6
4,073,231	-		AO353_18495	0.47	-2.3
4,073,231	-		AO353_18495	0.47	-1.1
4,073,249	+		AO353_18495	0.51	-0.9
4,073,323	+		AO353_18495	0.68	-0.8
4,073,323	+		AO353_18495	0.68	-1.4
4,073,323	+		AO353_18495	0.68	-1.2
4,073,323	+		AO353_18495	0.68	-0.1
4,073,323	+		AO353_18495	0.68	+0.3
4,073,323	+		AO353_18495	0.68	-0.5
4,073,323	+		AO353_18495	0.68	-1.1
4,073,323	+		AO353_18495	0.68	-0.5
4,073,323	+		AO353_18495	0.68	-0.1
4,073,323	+		AO353_18495	0.68	-1.5
4,073,323	+		AO353_18495	0.68	+0.9
4,073,324	-		AO353_18495	0.68	-0.7
4,073,324	-		AO353_18495	0.68	-1.1
4,073,324	-		AO353_18495	0.68	+0.3
4,073,324	-		AO353_18495	0.68	+3.5
4,073,324	-		AO353_18495	0.68	+0.3
4,073,324	-		AO353_18495	0.68	-0.9
4,073,324	-		AO353_18495	0.68	+0.3
4,073,324	-		AO353_18495	0.68	-0.9
4,073,324	-		AO353_18495	0.68	-1.6
4,073,356	+		AO353_18495	0.76	+3.5
4,073,356	+		AO353_18495	0.76	-2.5
4,073,504	+				-0.1
4,073,504	+				-0.1
4,073,504	+				-0.7
4,073,504	+				-0.3
4,073,504	+				-0.5
4,073,504	+				-1.5
4,073,504	+				+0.6
4,073,504	+				+0.3
4,073,504	+				+0.4
4,073,504	+				+0.5
4,073,505	-				-0.7
4,073,505	-				+1.9
4,073,512	-				+1.9
4,073,546	+				+0.3
4,073,547	-				-0.0
4,073,577	+				+1.4
4,073,577	+				+0.1
4,073,577	+				+0.3
4,073,577	+				-0.4
4,073,577	+				-1.4
4,073,577	+				+0.9
4,073,577	+				-0.4
4,073,578	-				+0.9
4,073,578	-				-1.1
4,073,578	-				-1.3
4,073,578	-				+0.1
4,073,578	-				-0.7
4,073,578	-				+1.9
4,073,580	+				-0.7
4,073,580	+				-1.1
4,073,580	+				+2.5
4,073,580	+				+0.1
4,073,580	+				-0.5
4,073,580	+				+0.5
4,073,580	+				+1.5
4,073,581	-				-0.4
4,073,581	-				+0.6
4,073,581	-				-0.7
4,073,581	-				-0.3
4,073,581	-				-0.3
4,073,581	-				-0.9
4,073,581	-				-1.2
4,073,581	-				-0.4
4,073,583	+				+2.6
4,073,584	-				+1.9
4,073,584	-				-0.5
4,073,682	+		AO353_18500	0.17	-1.1
4,073,683	-		AO353_18500	0.17	-1.3
4,073,949	+		AO353_18500	0.56	-2.5
4,073,950	-		AO353_18500	0.56	+0.1
4,074,227	+				-0.9
4,074,227	+				-1.4
4,074,227	+				+0.1
4,074,227	+				-2.4
4,074,227	+				-0.9
4,074,228	-				+0.3
4,074,228	-				+0.1
4,074,228	-				-1.1
4,074,228	-				-0.7
4,074,228	-				+0.9
4,074,228	-				+0.5
4,074,228	-				-1.6
4,074,230	+				+0.9
4,074,258	+				-1.1
4,074,259	-				+1.9
4,074,259	-				+0.9
4,074,278	+				-1.3
4,074,278	+				+0.5
4,074,278	+				-0.6
4,074,278	+				-0.4
4,074,279	-				+1.9
4,074,279	-				+0.6
4,074,279	-				-1.7
4,074,279	-				+0.3
4,074,279	-				+0.9
4,074,318	+		AO353_18505	0.16	-1.1
4,074,318	+		AO353_18505	0.16	-1.0