Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18055

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
3,973,821	+				+0.3
3,973,822	-				-0.1
3,973,830	+				+0.9
3,973,845	+				-0.7
3,973,846	-				+0.1
3,973,846	-				-1.0
3,973,846	-				+0.9
3,973,846	-				-0.7
3,973,846	-				+0.6
3,973,849	+				+0.1
3,973,849	+				-0.5
3,973,850	-				-0.6
3,973,850	-				-1.1
3,973,850	-				-0.3
3,973,859	+				+0.9
3,973,859	+				+0.9
3,973,860	-				-2.0
3,973,867	+				-2.2
3,973,867	+				-0.0
3,973,867	+				-0.1
3,973,868	-				-1.6
3,973,868	-				-1.2
3,973,868	-				-1.7
3,973,884	-				-0.5
3,973,884	-				+1.3
3,973,888	+				-0.1
3,973,888	+				-0.3
3,973,907	+				-1.8
3,973,907	+				-0.6
3,973,908	-				-0.1
3,973,928	+				+0.4
3,973,928	+				+0.2
3,973,928	+				-0.1
3,973,929	-				-1.7
3,973,929	-				+0.9
3,973,963	+				-0.1
3,973,963	+				-1.3
3,973,963	+				-0.9
3,973,963	+				+0.3
3,973,963	+				+1.4
3,973,963	+				-0.3
3,973,963	+				-0.7
3,973,964	-				-1.6
3,973,964	-				-0.5
3,973,964	-				-0.8
3,973,964	-				+0.9
3,973,964	-				-0.6
3,973,964	-				-0.9
3,973,964	-				-0.5
3,973,964	-				+2.1
3,973,964	-				+0.7
3,973,964	-				+0.5
3,973,964	-				-0.9
3,973,964	-				-0.4
3,973,964	-				-0.3
3,973,964	-				+1.9
3,974,016	-				+0.1
3,974,016	-				+1.9
3,974,027	+				-0.1
3,974,040	+				+1.9
3,974,051	+				-0.9
3,974,052	-				-1.5
3,974,052	-				+0.1
3,974,052	-				-2.0
3,974,073	+				-1.7
3,974,073	+				+0.5
3,974,073	+				-0.4
3,974,074	-				-0.5
3,974,107	+				-2.5
3,974,107	+				+0.6
3,974,107	+				+1.1
3,974,107	+				-0.6
3,974,108	-				-2.7
3,974,108	-				-0.9
3,974,108	-				+0.9
3,974,108	-				-0.6
3,974,108	-				-0.6
3,974,108	-				-0.5
3,974,108	-				-0.5
3,974,108	-				-1.9
3,974,156	+				+0.1
3,974,156	+				-1.6
3,974,157	-				+0.7
3,974,157	-				+1.9
3,974,162	+				-0.1
3,974,162	+				+0.9
3,974,162	+				-2.3
3,974,163	-				-0.6
3,974,163	-				+0.0
3,974,163	-				-0.9
3,974,163	-				-0.5
3,974,313	+				+0.9
3,974,313	+				-1.8
3,974,313	+				-0.3
3,974,313	+				+0.4
3,974,313	+				-1.9
3,974,313	+				+0.4
3,974,313	+				+0.3
3,974,313	+				+0.2
3,974,314	-				-1.1
3,974,314	-				-1.8
3,974,314	-				-0.8
3,974,314	-				-1.6
3,974,314	-				-1.1
3,974,314	-				+0.1
3,974,314	-				-0.5
3,974,314	-				+0.0
3,974,317	+		AO353_18050	0.10	-0.1
3,974,317	+		AO353_18050	0.10	-0.9
3,974,317	+		AO353_18050	0.10	+0.9
3,974,317	+		AO353_18050	0.10	+0.1
3,974,317	+		AO353_18050	0.10	+0.4
3,974,317	+		AO353_18050	0.10	+0.9
3,974,317	+		AO353_18050	0.10	-0.0
3,974,317	+		AO353_18050	0.10	-0.3
3,974,317	+		AO353_18050	0.10	-2.3
3,974,317	+		AO353_18050	0.10	-1.5
3,974,317	+		AO353_18050	0.10	+1.9
3,974,318	-		AO353_18050	0.10	-0.2
3,974,318	-		AO353_18050	0.10	-0.8
3,974,318	-		AO353_18050	0.10	-2.0
3,974,339	-		AO353_18050	0.14	+0.2
3,974,355	-		AO353_18050	0.18	-2.3
3,974,355	-		AO353_18050	0.18	-0.5
3,974,358	+		AO353_18050	0.18	-0.7
3,974,358	+		AO353_18050	0.18	+0.9
3,974,358	+		AO353_18050	0.18	-0.5
3,974,358	+		AO353_18050	0.18	-0.9
3,974,358	+		AO353_18050	0.18	-1.1
3,974,358	+		AO353_18050	0.18	-1.1
3,974,358	+		AO353_18050	0.18	-1.6
3,974,358	+		AO353_18050	0.18	-1.9
3,974,358	+		AO353_18050	0.18	+1.3
3,974,358	+		AO353_18050	0.18	+1.3
3,974,359	-		AO353_18050	0.18	+0.3
3,974,359	-		AO353_18050	0.18	+0.3
3,974,359	-		AO353_18050	0.18	-0.1
3,974,359	-				-1.9
3,974,359	-		AO353_18050	0.18	-1.3
3,974,359	-		AO353_18050	0.18	+0.5
3,974,359	-		AO353_18050	0.18	+0.4
3,974,359	-		AO353_18050	0.18	-1.7
3,974,365	-		AO353_18050	0.19	-1.3
3,974,370	+		AO353_18050	0.20	-0.6
3,974,395	+		AO353_18050	0.25	-0.6
3,974,395	+		AO353_18050	0.25	+0.4
3,974,395	+		AO353_18050	0.25	-0.1
3,974,395	+		AO353_18050	0.25	-0.1
3,974,395	+		AO353_18050	0.25	-0.5
3,974,395	+		AO353_18050	0.25	-1.6
3,974,395	+		AO353_18050	0.25	+0.2
3,974,395	+		AO353_18050	0.25	-2.5
3,974,395	+		AO353_18050	0.25	-0.6
3,974,395	+		AO353_18050	0.25	-0.5
3,974,396	-		AO353_18050	0.25	-0.1
3,974,396	-		AO353_18050	0.25	-0.6
3,974,396	-		AO353_18050	0.25	+0.2
3,974,396	-		AO353_18050	0.25	-1.1
3,974,396	-		AO353_18050	0.25	+0.6
3,974,396	-		AO353_18050	0.25	+1.3
3,974,396	-		AO353_18050	0.25	-1.6
3,974,397	+		AO353_18050	0.26	-0.9
3,974,397	+		AO353_18050	0.26	-0.0
3,974,397	+		AO353_18050	0.26	-0.6
3,974,397	+		AO353_18050	0.26	-2.7
3,974,397	+		AO353_18050	0.26	+0.9
3,974,397	+		AO353_18050	0.26	+0.3
3,974,397	+		AO353_18050	0.26	-0.3
3,974,397	+		AO353_18050	0.26	-0.1
3,974,398	-		AO353_18050	0.26	+0.9
3,974,398	-		AO353_18050	0.26	-0.9
3,974,401	+		AO353_18050	0.26	-0.4
3,974,401	+		AO353_18050	0.26	+1.9
3,974,401	+				+0.1
3,974,401	+		AO353_18050	0.26	-0.4
3,974,401	+		AO353_18050	0.26	-0.6
3,974,401	+		AO353_18050	0.26	+0.1
3,974,401	+		AO353_18050	0.26	+1.3
3,974,401	+		AO353_18050	0.26	-1.5
3,974,401	+		AO353_18050	0.26	+0.3
3,974,401	+		AO353_18050	0.26	-2.0
3,974,402	-		AO353_18050	0.26	-0.5
3,974,402	-		AO353_18050	0.26	+0.9
3,974,402	-		AO353_18050	0.26	-2.6
3,974,402	-		AO353_18050	0.26	-1.0
3,974,402	-		AO353_18050	0.26	+0.5
3,974,402	-		AO353_18050	0.26	-1.3
3,974,402	-		AO353_18050	0.26	-0.3
3,974,402	-		AO353_18050	0.26	-0.8
3,974,402	-		AO353_18050	0.26	-1.6
3,974,402	-		AO353_18050	0.26	-0.0
3,974,402	-		AO353_18050	0.26	-0.0
3,974,402	-				+0.3
3,974,402	-		AO353_18050	0.26	-0.1
3,974,402	-		AO353_18050	0.26	-0.5
3,974,402	-		AO353_18050	0.26	-0.7
3,974,402	-		AO353_18050	0.26	+1.9
3,974,411	+		AO353_18050	0.28	-0.7
3,974,412	-		AO353_18050	0.28	+0.3
3,974,427	+		AO353_18050	0.31	-0.1
3,974,427	+		AO353_18050	0.31	-1.5
3,974,427	+		AO353_18050	0.31	+0.1
3,974,428	-		AO353_18050	0.31	-1.5
3,974,428	-		AO353_18050	0.31	-0.1
3,974,428	-		AO353_18050	0.31	+0.2
3,974,428	-		AO353_18050	0.31	-0.6
3,974,557	-		AO353_18050	0.56	-2.7
3,974,557	-		AO353_18050	0.56	-0.5
3,974,557	-		AO353_18050	0.56	-1.6
3,974,557	-		AO353_18050	0.56	-1.3
3,974,582	+		AO353_18050	0.61	+0.1
3,974,582	+		AO353_18050	0.61	-1.5
3,974,582	+		AO353_18050	0.61	+1.3
3,974,583	-		AO353_18050	0.61	+0.1
3,974,583	-		AO353_18050	0.61	-0.1
3,974,686	-		AO353_18050	0.81	+0.3
3,974,689	-		AO353_18050	0.81	-0.7
3,974,689	-		AO353_18050	0.81	+0.4
3,974,697	-		AO353_18050	0.83	+1.9
3,974,697	-		AO353_18050	0.83	+1.9
3,974,761	+				-1.5
3,974,762	-				-0.6
3,974,779	+				+0.2
3,974,779	+				+1.1
3,974,779	+				+0.1
3,974,779	+				-0.8
3,974,780	-				-0.3
3,974,780	-				+0.1
3,974,780	-				+0.1
3,974,780	-				-0.0
3,974,814	+				-1.9
3,974,815	-				-2.3
3,974,815	-				+0.6
3,974,815	-				-1.1
3,974,815	-				-1.5
3,974,835	+				-1.5
3,974,836	-				-0.5
3,974,851	-				+1.4
3,974,851	-				-2.7
3,974,851	-				-0.3
3,974,985	+		AO353_18055	0.36	-1.6
3,974,985	+		AO353_18055	0.36	+0.9
3,974,985	+		AO353_18055	0.36	+0.6
3,974,986	-		AO353_18055	0.36	+0.4
3,974,986	-		AO353_18055	0.36	+0.9
3,974,986	-		AO353_18055	0.36	+0.3
3,974,986	-		AO353_18055	0.36	+0.1
3,974,986	-		AO353_18055	0.36	+1.4
3,974,986	-		AO353_18055	0.36	-0.2
3,974,986	-		AO353_18055	0.36	-0.5
3,975,024	+		AO353_18055	0.44	+0.5
3,975,024	+		AO353_18055	0.44	+0.5
3,975,025	-		AO353_18055	0.44	-1.3
3,975,052	+		AO353_18055	0.50	-0.7
3,975,052	+		AO353_18055	0.50	+1.9
3,975,053	-		AO353_18055	0.50	-0.7
3,975,053	-		AO353_18055	0.50	+1.0
3,975,055	+		AO353_18055	0.50	+3.4
3,975,055	+		AO353_18055	0.50	+1.9
3,975,055	+		AO353_18055	0.50	+1.9
3,975,055	+		AO353_18055	0.50	-0.5
3,975,055	+		AO353_18055	0.50	+0.6
3,975,056	-		AO353_18055	0.51	+0.3
3,975,056	-		AO353_18055	0.51	-0.3
3,975,122	+		AO353_18055	0.64	-0.1
3,975,123	-		AO353_18055	0.64	+1.9
3,975,124	+		AO353_18055	0.64	-0.1
3,975,124	+		AO353_18055	0.64	-0.1
3,975,124	+		AO353_18055	0.64	-2.2
3,975,124	+		AO353_18055	0.64	-1.5
3,975,124	+		AO353_18055	0.64	-0.5
3,975,124	+		AO353_18055	0.64	+1.9
3,975,124	+		AO353_18055	0.64	-0.3
3,975,124	+		AO353_18055	0.64	+1.1
3,975,124	+		AO353_18055	0.64	+0.4
3,975,124	+		AO353_18055	0.64	-1.1
3,975,124	+		AO353_18055	0.64	+2.9
3,975,124	+		AO353_18055	0.64	-0.6
3,975,125	-		AO353_18055	0.65	+0.9
3,975,125	-		AO353_18055	0.65	-0.9
3,975,125	-		AO353_18055	0.65	-0.5
3,975,125	-		AO353_18055	0.65	+0.9
3,975,125	-		AO353_18055	0.65	-0.1
3,975,125	-		AO353_18055	0.65	+1.4
3,975,125	-		AO353_18055	0.65	-1.4
3,975,125	-		AO353_18055	0.65	+1.5
3,975,125	-		AO353_18055	0.65	+3.2
3,975,125	-		AO353_18055	0.65	+0.7
3,975,290	+				+0.4
3,975,291	-				-0.8
3,975,305	+				-0.7
3,975,306	-				+0.1
3,975,419	-		AO353_18060	0.22	-1.3
3,975,419	-		AO353_18060	0.22	+0.9
3,975,520	+		AO353_18060	0.41	+1.9
3,975,520	+		AO353_18060	0.41	-1.1
3,975,520	+		AO353_18060	0.41	-1.1
3,975,520	+		AO353_18060	0.41	+1.3
3,975,520	+		AO353_18060	0.41	+0.6
3,975,521	-		AO353_18060	0.41	-2.3
3,975,521	-		AO353_18060	0.41	-1.2
3,975,551	+		AO353_18060	0.47	-0.9
3,975,599	+		AO353_18060	0.56	-0.7
3,975,600	-		AO353_18060	0.57	-0.9
3,975,609	-		AO353_18060	0.58	-1.1
3,975,673	+		AO353_18060	0.71	+0.3
3,975,673	+		AO353_18060	0.71	+0.4
3,975,673	+		AO353_18060	0.71	-0.5
3,975,674	-		AO353_18060	0.71	+2.4
3,975,698	+		AO353_18060	0.76	-0.8
3,975,698	+		AO353_18060	0.76	-2.0
3,975,698	+		AO353_18060	0.76	-0.3
3,975,699	-		AO353_18060	0.76	-1.5
3,975,699	-		AO353_18060	0.76	+1.9
3,975,769	+		AO353_18060	0.89	+0.7
3,975,769	+		AO353_18060	0.89	+0.3
3,975,769	+		AO353_18060	0.89	+0.3
3,975,769	+		AO353_18060	0.89	-0.1
3,975,769	+		AO353_18060	0.89	+0.3
3,975,769	+		AO353_18060	0.89	-1.0
3,975,770	-		AO353_18060	0.89	+1.1
3,975,770	-		AO353_18060	0.89	-2.7
3,975,770	-		AO353_18060	0.89	-0.7
3,975,770	-		AO353_18060	0.89	+0.5
3,975,770	-		AO353_18060	0.89	-0.5
3,975,770	-		AO353_18060	0.89	+0.9
3,975,782	+				-1.7
3,975,782	+				+0.6
3,975,783	-				-0.7
3,975,783	-				-0.7
3,975,786	+				-0.5
3,975,786	+				-0.6
3,975,786	+				+1.3
3,975,786	+				-1.8
3,975,786	+				-1.3
3,975,786	+				-0.1
3,975,786	+				+0.3
3,975,786	+				-1.1
3,975,786	+				+0.7
3,975,786	+				+3.4
3,975,786	+				-1.6
3,975,786	+				-0.7
3,975,786	+				-1.8
3,975,786	+				+0.9
3,975,786	+				+1.9
3,975,787	-				-0.9
3,975,787	-				-0.5
3,975,787	-				-1.0
3,975,787	-				-1.1
3,975,787	-				+2.4
3,975,787	-				-1.0
3,975,787	-				+1.9
3,975,787	-				-1.0
3,975,787	-				+0.5
3,975,787	-				+0.9
3,975,787	-				-0.8
3,975,787	-				-0.7
3,975,787	-				+0.3
3,975,787	-				-2.3
3,975,787	-				-0.8
3,975,787	-				+0.9
3,975,787	-				-0.3
3,975,788	+				-0.5
3,975,788	+				-1.0
3,975,788	+				+0.9
3,975,789	-				+0.9
3,975,816	+				-0.7
3,975,816	+				-0.1
3,975,816	+				+0.7
3,975,817	-				-0.3
3,975,817	-				+0.3
3,975,896	-				+0.9
3,975,921	+				-1.8
3,975,922	-				-0.1
3,975,922	-				+0.9
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