Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16655

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
3,697,443	-		AO353_16645	0.54	+1.4
3,697,542	+		AO353_16645	0.73	-0.4
3,697,542	+		AO353_16645	0.73	-1.8
3,697,542	+		AO353_16645	0.73	-0.2
3,697,542	+		AO353_16645	0.73	-1.0
3,697,542	+		AO353_16645	0.73	-0.2
3,697,578	+		AO353_16645	0.79	-1.0
3,697,578	+		AO353_16645	0.79	-1.5
3,697,578	+		AO353_16645	0.79	+2.1
3,697,579	-		AO353_16645	0.80	+0.4
3,697,579	-		AO353_16645	0.80	+0.8
3,697,579	-		AO353_16645	0.80	-1.6
3,697,668	+				+0.8
3,697,668	+				+0.2
3,697,668	+				+0.0
3,697,668	+				-0.4
3,697,668	+				-0.3
3,697,668	+				+1.4
3,697,669	-				-0.1
3,697,669	-				+0.8
3,697,669	-				+0.3
3,697,669	-				+0.5
3,697,684	-				+1.5
3,697,684	-				+1.8
3,697,684	-				-1.6
3,697,723	+				-0.2
3,697,723	+				-1.2
3,697,723	+				-1.3
3,697,723	+				+0.8
3,697,723	+				-1.4
3,697,723	+				-0.5
3,697,723	+				-1.5
3,697,723	+				-2.6
3,697,723	+				-0.5
3,697,723	+				+0.2
3,697,724	-				+0.2
3,697,724	-				-0.6
3,697,724	-				+0.2
3,697,724	-				-0.9
3,697,724	-				-0.3
3,697,724	-				-1.0
3,697,724	-				-1.2
3,697,724	-				+0.0
3,697,724	-				-1.6
3,697,727	+				+0.5
3,697,727	+				+0.8
3,697,727	+				-1.1
3,697,727	+				-1.8
3,697,727	+				-1.6
3,697,727	+				-0.5
3,697,727	+				+1.8
3,697,727	+				+0.8
3,697,727	+				+1.8
3,697,728	-				-0.5
3,697,728	-				-0.3
3,697,728	-				-1.0
3,697,728	-				-1.2
3,697,728	-				-2.0
3,697,728	-				-0.1
3,697,828	+		AO353_16650	0.20	-0.8
3,697,829	-		AO353_16650	0.20	-0.0
3,697,829	-		AO353_16650	0.20	+1.8
3,697,829	-		AO353_16650	0.20	+0.5
3,697,972	-		AO353_16650	0.43	-1.2
3,697,972	-		AO353_16650	0.43	-2.1
3,697,972	-		AO353_16650	0.43	-0.2
3,697,972	-		AO353_16650	0.43	-1.1
3,697,972	-		AO353_16650	0.43	+0.0
3,697,972	-		AO353_16650	0.43	-2.2
3,697,972	-		AO353_16650	0.43	+0.8
3,697,972	-		AO353_16650	0.43	+0.1
3,697,972	-		AO353_16650	0.43	+0.1
3,697,972	-		AO353_16650	0.43	+0.7
3,697,972	-		AO353_16650	0.43	+0.8
3,698,097	+		AO353_16650	0.64	+0.5
3,698,097	+		AO353_16650	0.64	-0.8
3,698,097	+		AO353_16650	0.64	-0.3
3,698,097	+		AO353_16650	0.64	-0.5
3,698,098	-		AO353_16650	0.64	+0.2
3,698,098	-		AO353_16650	0.64	+0.2
3,698,098	-		AO353_16650	0.64	-1.3
3,698,316	+				+0.8
3,698,316	+				-2.0
3,698,316	+				-0.8
3,698,317	-				-0.5
3,698,349	+				+1.2
3,698,350	-				+0.6
3,698,350	-				+1.8
3,698,443	+		AO353_16655	0.34	-1.0
3,698,443	+		AO353_16655	0.34	-2.5
3,698,443	+		AO353_16655	0.34	-0.5
3,698,444	-		AO353_16655	0.35	-0.3
3,698,530	+		AO353_16655	0.60	-0.0
3,698,530	+		AO353_16655	0.60	-0.4
3,698,531	-		AO353_16655	0.61	-2.1
3,698,548	-		AO353_16655	0.66	-1.3
3,698,763	+		AO353_16660	0.11	-0.5
3,698,763	+		AO353_16660	0.11	-0.8
3,698,763	+		AO353_16660	0.11	+1.8
3,698,764	-		AO353_16660	0.11	+0.7
3,698,764	-		AO353_16660	0.11	-0.2
3,698,886	+		AO353_16660	0.23	-1.6
3,698,886	+		AO353_16660	0.23	+1.0
3,698,886	+		AO353_16660	0.23	+1.6
3,698,886	+		AO353_16660	0.23	-1.8
3,698,886	+		AO353_16660	0.23	-0.8
3,698,886	+		AO353_16660	0.23	-0.2
3,698,886	+		AO353_16660	0.23	-0.5
3,698,886	+		AO353_16660	0.23	+2.2
3,698,886	+		AO353_16660	0.23	+0.2
3,698,886	+		AO353_16660	0.23	-0.5
3,698,886	+		AO353_16660	0.23	+1.2
3,698,887	-		AO353_16660	0.23	-0.2
3,698,887	-		AO353_16660	0.23	-0.8
3,698,887	-		AO353_16660	0.23	+1.5
3,698,887	-		AO353_16660	0.23	-1.3
3,699,024	+		AO353_16660	0.37	+0.5
3,699,024	+		AO353_16660	0.37	-0.8
3,699,024	+		AO353_16660	0.37	-1.3
3,699,024	+		AO353_16660	0.37	-1.1
3,699,024	+		AO353_16660	0.37	-1.2
3,699,024	+		AO353_16660	0.37	+0.2
3,699,024	+		AO353_16660	0.37	+0.0
3,699,024	+		AO353_16660	0.37	-1.3
3,699,024	+		AO353_16660	0.37	+1.2
3,699,025	-		AO353_16660	0.37	+0.3
3,699,057	+		AO353_16660	0.40	+0.8
3,699,057	+		AO353_16660	0.40	-0.3
3,699,057	+		AO353_16660	0.40	-1.1
3,699,058	-		AO353_16660	0.40	-0.2
3,699,058	-		AO353_16660	0.40	-1.0
3,699,058	-		AO353_16660	0.40	+0.8
3,699,058	-		AO353_16660	0.40	-0.8
3,699,058	-		AO353_16660	0.40	+0.2
3,699,058	-		AO353_16660	0.40	+0.6
3,699,058	-		AO353_16660	0.40	+1.8
3,699,058	-		AO353_16660	0.40	-1.5
3,699,058	-		AO353_16660	0.40	-1.0
3,699,058	-		AO353_16660	0.40	-0.2
3,699,180	+		AO353_16660	0.52	+0.5
3,699,180	+		AO353_16660	0.52	-1.0
3,699,180	+		AO353_16660	0.52	-1.5
3,699,180	+		AO353_16660	0.52	+0.1
3,699,180	+		AO353_16660	0.52	+0.1
3,699,181	-		AO353_16660	0.53	+1.8
3,699,181	-		AO353_16660	0.53	-0.2
3,699,181	-		AO353_16660	0.53	+0.7
3,699,181	-		AO353_16660	0.53	-0.8
3,699,393	+		AO353_16660	0.74	+1.8
3,699,394	-		AO353_16660	0.74	-2.6
3,699,394	-		AO353_16660	0.74	-0.8
3,699,477	+		AO353_16660	0.82	+1.8
3,699,477	+		AO353_16660	0.82	+0.2
3,699,477	+		AO353_16660	0.82	-0.5
3,699,477	+		AO353_16660	0.82	+1.2
3,699,477	+		AO353_16660	0.82	-1.2
3,699,477	+		AO353_16660	0.82	+2.4
3,699,477	+		AO353_16660	0.82	+1.8
3,699,477	+		AO353_16660	0.82	-0.2
3,699,477	+		AO353_16660	0.82	-0.2
3,699,477	+		AO353_16660	0.82	-1.3
3,699,477	+		AO353_16660	0.82	+0.2
3,699,477	+		AO353_16660	0.82	+0.8
3,699,477	+		AO353_16660	0.82	-1.2
3,699,478	-		AO353_16660	0.82	-0.8
3,699,478	-		AO353_16660	0.82	+0.5
3,699,478	-		AO353_16660	0.82	+0.0
3,699,478	-		AO353_16660	0.82	-0.2
3,699,478	-		AO353_16660	0.82	+1.8
3,699,478	-		AO353_16660	0.82	+0.4
3,699,532	-		AO353_16660	0.88	-1.4
3,699,532	-		AO353_16660	0.88	+4.2
3,699,538	+		AO353_16660	0.88	-0.5
3,699,538	+		AO353_16660	0.88	-2.8
3,699,538	+		AO353_16660	0.88	+1.1
3,699,538	+		AO353_16660	0.88	-1.8
3,699,538	+		AO353_16660	0.88	-1.2
3,699,539	-		AO353_16660	0.88	+0.2
3,699,539	-		AO353_16660	0.88	-1.0
3,699,539	-		AO353_16660	0.88	+1.1
3,699,539	-		AO353_16660	0.88	-0.1
3,699,539	-		AO353_16660	0.88	+0.8
3,699,539	-		AO353_16660	0.88	-1.3
3,699,539	-		AO353_16660	0.88	+1.8
3,699,539	-		AO353_16660	0.88	+0.5
3,699,539	-		AO353_16660	0.88	+1.2
3,699,539	-		AO353_16660	0.88	-1.0
3,699,539	-		AO353_16660	0.88	-1.2
3,699,539	-		AO353_16660	0.88	-1.2
3,699,539	-		AO353_16660	0.88	+0.8
3,699,649	+				-1.3
3,699,650	-				+1.4