Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16345

Experiment: Nitrate reduction, replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate B
3,626,373	-		AO353_16335	0.70	-0.9
3,626,373	-		AO353_16335	0.70	-1.3
3,626,521	+		AO353_16335	0.88	-0.2
3,626,521	+		AO353_16335	0.88	+0.1
3,626,521	+		AO353_16335	0.88	+1.8
3,627,020	+		AO353_16340	0.55	-0.8
3,627,020	+		AO353_16340	0.55	-0.0
3,627,020	+		AO353_16340	0.55	-1.0
3,627,020	+		AO353_16340	0.55	+1.3
3,627,020	+		AO353_16340	0.55	+2.6
3,627,020	+		AO353_16340	0.55	-0.3
3,627,020	+		AO353_16340	0.55	-0.0
3,627,020	+		AO353_16340	0.55	-1.6
3,627,020	+		AO353_16340	0.55	-1.2
3,627,020	+		AO353_16340	0.55	-0.2
3,627,020	+		AO353_16340	0.55	-0.1
3,627,020	+		AO353_16340	0.55	-0.6
3,627,020	+		AO353_16340	0.55	+1.8
3,627,020	+		AO353_16340	0.55	+0.0
3,627,020	+		AO353_16340	0.55	+1.0
3,627,020	+		AO353_16340	0.55	-0.2
3,627,021	-		AO353_16340	0.56	+0.4
3,627,021	-		AO353_16340	0.56	-0.8
3,627,021	-		AO353_16340	0.56	-0.3
3,627,021	-		AO353_16340	0.56	-0.3
3,627,021	-		AO353_16340	0.56	+1.0
3,627,021	-		AO353_16340	0.56	+0.2
3,627,021	-		AO353_16340	0.56	+1.2
3,627,021	-		AO353_16340	0.56	-0.5
3,627,021	-		AO353_16340	0.56	+1.2
3,627,021	-		AO353_16340	0.56	-1.6
3,627,021	-		AO353_16340	0.56	+0.6
3,627,021	-		AO353_16340	0.56	-0.2
3,627,021	-		AO353_16340	0.56	-2.3
3,627,021	-		AO353_16340	0.56	-0.7
3,627,073	+		AO353_16340	0.63	+1.2
3,627,073	+		AO353_16340	0.63	+0.2
3,627,073	+		AO353_16340	0.63	-1.6
3,627,073	+		AO353_16340	0.63	-0.5
3,627,073	+		AO353_16340	0.63	-0.2
3,627,073	+		AO353_16340	0.63	-0.2
3,627,073	+		AO353_16340	0.63	-1.8
3,627,074	-		AO353_16340	0.63	-1.6
3,627,074	-		AO353_16340	0.63	-0.2
3,627,074	-		AO353_16340	0.63	-0.9
3,627,074	-		AO353_16340	0.63	+0.8
3,627,074	-		AO353_16340	0.63	+0.6
3,627,074	-		AO353_16340	0.63	-0.5
3,627,074	-		AO353_16340	0.63	-1.2
3,627,077	+		AO353_16340	0.64	+0.5
3,627,077	+		AO353_16340	0.64	+0.8
3,627,077	+		AO353_16340	0.64	+0.5
3,627,077	+		AO353_16340	0.64	-1.2
3,627,077	+		AO353_16340	0.64	-1.5
3,627,077	+		AO353_16340	0.64	-3.1
3,627,077	+		AO353_16340	0.64	-1.0
3,627,077	+		AO353_16340	0.64	-1.0
3,627,077	+		AO353_16340	0.64	-0.0
3,627,077	+		AO353_16340	0.64	-1.7
3,627,077	+		AO353_16340	0.64	+1.2
3,627,077	+		AO353_16340	0.64	-0.2
3,627,077	+		AO353_16340	0.64	-1.0
3,627,078	-		AO353_16340	0.64	+0.2
3,627,078	-		AO353_16340	0.64	+2.8
3,627,078	-		AO353_16340	0.64	-1.7
3,627,078	-		AO353_16340	0.64	-2.2
3,627,078	-		AO353_16340	0.64	+0.8
3,627,078	-		AO353_16340	0.64	+0.1
3,627,078	-		AO353_16340	0.64	+2.2
3,627,078	-		AO353_16340	0.64	-0.4
3,627,078	-		AO353_16340	0.64	+1.2
3,627,078	-		AO353_16340	0.64	+0.2
3,627,078	-		AO353_16340	0.64	+1.1
3,627,163	+		AO353_16340	0.76	-1.0
3,627,213	+		AO353_16340	0.83	-0.9
3,627,214	-		AO353_16340	0.83	-0.1
3,627,247	+		AO353_16340	0.88	-2.3
3,627,247	+		AO353_16340	0.88	-0.8
3,627,247	+		AO353_16340	0.88	+0.2
3,627,248	-		AO353_16340	0.88	+1.8
3,627,269	+				+3.4
3,627,269	+				-1.3
3,627,269	+				+0.4
3,627,269	+				+2.2
3,627,270	-				+1.0
3,627,270	-				-1.8
3,627,270	-				-0.5
3,627,460	+		AO353_16345	0.18	+0.1
3,627,804	+		AO353_16345	0.74	-1.3
3,627,804	+		AO353_16345	0.74	-0.8
3,627,904	+		AO353_16345	0.90	-0.2
3,627,904	+		AO353_16345	0.90	-1.5
3,627,904	+		AO353_16345	0.90	-1.6
3,627,904	+		AO353_16345	0.90	+0.2
3,627,936	+				+0.2
3,627,936	+				-0.6
3,627,936	+				+0.3
3,627,936	+				-0.5
3,627,936	+				+0.5
3,627,936	+				-0.9
3,627,936	+				-1.3
3,627,937	-				+1.0
3,627,937	-				-1.8
3,627,937	-				+0.5
3,627,937	-				+0.8
3,627,937	-				+0.2
3,627,937	-				+0.2
3,627,937	-				+0.2
3,627,937	-				-1.5
3,627,941	+				-0.8
3,627,941	+				-0.5
3,627,941	+				-0.5
3,627,941	+				+1.8
3,627,942	-				-0.2
3,628,007	-				+0.2
3,628,038	+				+2.8
3,628,292	+		AO353_16350	0.30	-0.8
3,628,293	-		AO353_16350	0.30	-0.2
3,628,293	-		AO353_16350	0.30	-0.5
3,628,293	-		AO353_16350	0.30	-0.2
3,628,293	-		AO353_16350	0.30	+0.5
3,628,293	-		AO353_16350	0.30	-0.3
3,628,589	+		AO353_16350	0.67	-0.5
3,628,589	+		AO353_16350	0.67	-0.2
3,628,589	+		AO353_16350	0.67	+0.8
3,628,589	+		AO353_16350	0.67	+0.2
3,628,589	+		AO353_16350	0.67	+0.2
3,628,589	+		AO353_16350	0.67	-0.6
3,628,590	-		AO353_16350	0.68	+0.8
3,628,590	-		AO353_16350	0.68	-0.3
3,628,590	-		AO353_16350	0.68	-1.3
3,628,809	-				+0.6
3,628,817	+				-0.2
3,628,817	+				+0.2
3,628,818	-				+0.5
3,628,841	+				-1.5
3,628,842	-				-0.1
3,628,881	-				-1.2
3,628,881	-				-0.3
3,628,900	-				+0.2
3,628,939	+				-0.8
3,628,940	-				+1.3
3,628,940	-				+0.1
3,628,940	-				-0.1
3,628,940	-				-0.9
3,628,943	+				-2.4
3,628,943	+				-0.6
3,628,943	+				-1.3
3,628,943	+				-1.6
3,628,943	+				+0.2
3,628,943	+				+0.5
3,628,944	-				-0.6
3,628,944	-				-0.1
3,628,944	-				-1.1
3,628,944	-				-1.3
3,628,944	-				+0.4
3,628,944	-				+0.8
3,628,944	-				+0.6
3,628,944	-				-1.3
3,628,947	+				-2.3
3,628,947	+				-2.0
3,628,947	+				+0.4
3,628,947	+				+0.6
3,628,947	+				+1.2
3,628,947	+				-0.3
3,628,947	+				+0.1
3,628,947	+				-0.3
3,628,948	-				-1.2
3,628,948	-				-0.3
3,628,948	-				+0.2
3,628,948	-				+0.8
3,628,948	-				+4.4
3,628,948	-				+0.8
3,628,948	-				-1.5
3,628,948	-				-0.3